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scnpilot_solids1_trim150_scaffold_73

Search features with annotation key words

Displaying items 121-150 of 279 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_73_119
Agrobacterium sp. ATCC 31749, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

102481..103146
DNA (666bp) protein (222aa)
Putative uncharacterized protein n=1 Tax=Agrobacterium sp. ATCC 31749 RepID=F5JF84_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EGL63644.1}; TaxID=82789 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium sp. ATCC 31749.;"
scnpilot_solids1_trim150_scaffold_73_120
Agrobacterium sp. ATCC 31749, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

103211..104053
DNA (843bp) protein (281aa)
Putative uncharacterized protein n=1 Tax=Agrobacterium sp. ATCC 31749 RepID=F5JF48_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EGL63608.1}; TaxID=82789 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium sp. ATCC 31749.;"
ParB-like partition protein
scnpilot_solids1_trim150_scaffold_73_121

Not on your lists

104055..104681
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Vibrio phage jenny 12G5 RepID=R9UB09_9VIRU
Uncharacterized protein {ECO:0000313|EMBL:KKN29804.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_73_122
Agrobacterium sp. ATCC 31749, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

104678..105274
DNA (597bp) protein (199aa)
Endodeoxyribonuclease n=1 Tax=Agrobacterium sp. ATCC 31749 RepID=F5JF86_9RHIZ rbh
Endodeoxyribonuclease {ECO:0000313|EMBL:EGL63646.1}; TaxID=82789 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium sp. ATCC 31749.;"
putative exonuclease
scnpilot_solids1_trim150_scaffold_73_123
Paracoccus phage vB_PmaS_IMEP1, Caudovirales, Viruses

Not on your lists

105286..105963
DNA (678bp) protein (226aa)
Putative uncharacterized protein n=1 Tax=Commensalibacter intestini A911 RepID=G6F2B5_9PROT
CzcR-like response regulator {ECO:0000313|EMBL:AJD83149.1}; TaxID=1561065 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Siphoviridae.;" source="Paracoccus phage vB_PmaS_IMEP1.;"
CzcR-like response regulator
scnpilot_solids1_trim150_scaffold_73_124
unknown

Not on your lists

105960..106190
DNA (231bp) protein (77aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_73_125
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

106187..107314
DNA (1128bp) protein (376aa)
Putative uncharacterized protein n=1 Tax=Agrobacterium sp. ATCC 31749 RepID=F5JER3_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:KDR88276.1}; TaxID=1315272 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens GW4.;"
DNA-directed DNA polymerase B
scnpilot_solids1_trim150_scaffold_73_126
Bacillus hemicellulosilyticus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

107307..107972
DNA (666bp) protein (222aa)
Uncharacterized protein n=1 Tax=Staphylococcus epidermidis NIHLM061 RepID=J0EQW1_STAEP
Uncharacterized protein {ECO:0000313|EMBL:GAE32435.1}; TaxID=1236971 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus hemicellulosilyticus JCM 9152.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_73_127
Agrobacterium sp. ATCC 31749, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

107962..108921
DNA (960bp) protein (320aa)
Putative uncharacterized protein n=1 Tax=Agrobacterium sp. ATCC 31749 RepID=F5JER3_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EGL63561.1}; TaxID=82789 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium sp. ATCC 31749.;"
DNA-directed DNA polymerase B
scnpilot_solids1_trim150_scaffold_73_128
Agrobacterium sp. ATCC 31749, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

108918..109226
DNA (309bp) protein (103aa)
Putative uncharacterized protein n=1 Tax=Agrobacterium sp. ATCC 31749 RepID=F5JER2_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EGL63560.1}; TaxID=82789 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium sp. ATCC 31749.;"
scnpilot_solids1_trim150_scaffold_73_129
Agrobacterium sp. ATCC 31749, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

109482..110897
DNA (1416bp) protein (472aa)
Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase n=1 Tax=Agrobacterium sp. ATCC 31749 RepID=F5JF87_9RHIZ rbh
Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase {ECO:0000313|EMBL:EGL63647.1}; TaxID=82789 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium sp. ATCC 31749.;"
SNF2-like protein rbh
scnpilot_solids1_trim150_scaffold_73_130
Asticcacaulis sp. AC466, Asticcacaulis, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

110967..111638
DNA (672bp) protein (224aa)
Uncharacterized protein n=1 Tax=Asticcacaulis sp. AC466 RepID=V4PE69_9CAUL
Uncharacterized protein {ECO:0000313|EMBL:ESQ85449.1}; TaxID=1282362 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis.;" source="Asticcacaulis sp. AC466.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_73_131
Amycolatopsis japonica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(112154..113911)
DNA (1758bp) protein (586aa)
Cytochrome P450 n=1 Tax=Amycolatopsis orientalis HCCB10007 RepID=R4SLK5_AMYOR
Cytochrome P450 {ECO:0000313|EMBL:AIG78881.1}; TaxID=208439 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis japonica.;"
cytochrome P450
scnpilot_solids1_trim150_scaffold_73_132
unknown

Not on your lists

114176..115021
DNA (846bp) protein (282aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_73_133
unknown

Not on your lists

115335..115493
DNA (159bp) protein (53aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_73_134
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

115522..116937
DNA (1416bp) protein (472aa)
Amidase n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q123N9_POLSJ rbh
amidase rbh
Amidase {ECO:0000313|EMBL:ABE46253.1}; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
scnpilot_solids1_trim150_scaffold_73_135
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(117155..117934)
DNA (780bp) protein (260aa)
ABC transporter related protein n=1 Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3RXW8_FERPA
Uncharacterized protein {ECO:0000313|EMBL:KGM31417.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
ABC transporter; K01996 branched-chain amino acid transport system ATP-binding protein
scnpilot_solids1_trim150_scaffold_73_136
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(117942..118682)
DNA (741bp) protein (247aa)
amino acid ABC transporter ATP-binding protein n=1 Tax=SAR324 cluster bacterium JCVI-SC AAA005 RepID=UPI0002626AD1
Uncharacterized protein {ECO:0000313|EMBL:KGM30008.1}; Flags: Fragment;; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
ABC transporter ATP-binding protein; K01995 branched-chain amino acid transport system ATP-binding protein
scnpilot_solids1_trim150_scaffold_73_137
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(118672..119652)
DNA (981bp) protein (327aa)
Uncharacterized protein {ECO:0000313|EMBL:KGM35688.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
Inner-membrane translocator id=1879040 bin=GWD2_Chloroflexi_49_16 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Chloroflexi_49_16 organism_group=Chloroflexi organism_desc=Good +
inner-membrane translocator
scnpilot_solids1_trim150_scaffold_73_138
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(119664..120563)
DNA (900bp) protein (300aa)
Putative branched-chain amino acid transport permease n=1 Tax=Fulvimarina pelagi HTCC2506 RepID=Q0FY62_9RHIZ
Branched-chain amino acid transport permease {ECO:0000313|EMBL:KGM35687.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
branched-chain amino acid transport permease; K01997 branched-chain amino acid transport system permease protein
scnpilot_solids1_trim150_scaffold_73_139
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(120663..121886)
DNA (1224bp) protein (408aa)
ABC transporter substrate-binding protein n=1 Tax=Fulvimarina pelagi HTCC2506 RepID=Q0FY58_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KGM35686.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
receptor family ligand binding region family protein 11
scnpilot_solids1_trim150_scaffold_73_140
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

121995..122858
DNA (864bp) protein (288aa)
Transcriptional regulator, RpiR family n=3 Tax=Rhizobium meliloti RepID=F6C1T9_SINMB
Uncharacterized protein {ECO:0000313|EMBL:KGM35685.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
RpiR family transcriptional regulator
scnpilot_solids1_trim150_scaffold_73_141
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

122871..124199
DNA (1329bp) protein (443aa)
Class-III pyridoxal-phosphate-dependent aminotransferase (EC:2.6.-.-) rbh
Class-III pyridoxal-phosphate-dependent aminotransferase n=2 Tax=Rhizobium meliloti RepID=M4MIX5_RHIML rbh
Uncharacterized protein {ECO:0000313|EMBL:KGM35684.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
scnpilot_solids1_trim150_scaffold_73_142
Rhizobium sp., Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

124504..124947
DNA (444bp) protein (148aa)
GreA/GreB family elongation factor n=1 Tax=Rhizobium sp. RepID=L0NF21_RHISP
GreA/GreB family elongation factor {ECO:0000313|EMBL:CCF18922.1}; TaxID=391 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp.;"
nucleoside diphosphate kinase regulator; K06140 regulator of nucleoside diphosphate kinase
scnpilot_solids1_trim150_scaffold_73_143
Hoeflea sp. BRH_c9, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

125094..125630
DNA (537bp) protein (179aa)
Putative GreA/GreB family elongation factor n=1 Tax=Rhizobium sp. RepID=L0NCT2_RHISP
Uncharacterized protein {ECO:0000313|EMBL:KJS10177.1}; TaxID=1629712 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. BRH_c9.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_73_144
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

125745..127001
DNA (1257bp) protein (419aa)
D-amino acid dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01202}; EC=1.4.99.1 {ECO:0000256|HAMAP-Rule:MF_01202};; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
dadA; D-amino acid dehydrogenase small subunit; K00285 D-amino-acid dehydrogenase [EC:1.4.99.1]
D-amino acid dehydrogenase small subunit n=1 Tax=Nitratireductor indicus C115 RepID=K2NT27_9RHIZ rbh
scnpilot_solids1_trim150_scaffold_73_145
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(127189..128238)
DNA (1050bp) protein (350aa)
Putative cytoplasmatic protein CoxI n=2 Tax=Oligotropha carboxidovorans RepID=F8BQL9_OLICM rbh
coxI; putative cytoplasmatic protein CoxI; K07402 xanthine dehydrogenase accessory factor rbh
Putative cytoplasmatic protein CoxI {ECO:0000313|EMBL:AEI08112.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
scnpilot_solids1_trim150_scaffold_73_146
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(128235..128663)
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. CF142 RepID=J1SVW3_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EJJ29403.1}; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_73_147
Hoeflea sp. BRH_c9, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(128831..129433)
DNA (603bp) protein (201aa)
hypothetical protein n=1 Tax=Ahrensia kielensis RepID=UPI0003716917
Uncharacterized protein {ECO:0000313|EMBL:KJS10173.1}; TaxID=1629712 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. BRH_c9.;"
import inner membrane translocase subunit Tim44
scnpilot_solids1_trim150_scaffold_73_148
Nitratireductor aquibiodomus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(129464..131083)
DNA (1620bp) protein (540aa)
cytochrome-c oxidase (EC:1.9.3.1); K02274 cytochrome c oxidase subunit I [EC:1.9.3.1]
Cytochrome c oxidase subunit 1 n=1 Tax=Nitratireductor aquibiodomus RA22 RepID=I5BSY2_9RHIZ rbh
Cytochrome c oxidase subunit 1 {ECO:0000313|EMBL:EIM72684.1}; TaxID=1189611 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor aquibiodomus RA22.;"
Displaying items 121-150 of 279 in total

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