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scnpilot_solids1_trim150_scaffold_76

Search features with annotation key words

Displaying items 1-30 of 112 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_76_1
Erwinia mallotivora, Erwinia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(212..724)
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Escherichia coli HVH 39 (4-2679949) RepID=T5YEP3_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:EXU76757.1}; TaxID=69222 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Erwinia.;" source="Erwinia mallotivora.;"
Hypothetical protein txi4
scnpilot_solids1_trim150_scaffold_76_2
Methylobacterium populi, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(726..2738)
DNA (2013bp) protein (671aa)
Integrase family protein n=1 Tax=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) RepID=B1ZHR5_METPB rbh
integrase family protein rbh
Integrase family protein {ECO:0000313|EMBL:ACB81383.1}; TaxID=441620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001).;"
scnpilot_solids1_trim150_scaffold_76_3
Methylobacterium populi, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2728..4311)
DNA (1584bp) protein (528aa)
Integrase family protein n=1 Tax=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) RepID=B1ZHR6_METPB rbh
integrase family protein rbh
Integrase family protein {ECO:0000313|EMBL:ACB81384.1}; TaxID=441620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001).;"
scnpilot_solids1_trim150_scaffold_76_4
Methylobacterium populi, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4304..5566)
DNA (1263bp) protein (421aa)
Integrase family protein n=1 Tax=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) RepID=B1ZHR7_METPB
integrase family protein
Integrase family protein {ECO:0000313|EMBL:ACB81385.1}; TaxID=441620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001).;"
scnpilot_solids1_trim150_scaffold_76_5
unknown

Not on your lists

comp(5563..5748)
DNA (186bp) protein (62aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_76_6
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6879..7400)
DNA (522bp) protein (174aa)
Single-stranded DNA-binding protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HVG1_9RHIZ
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|RuleBase:RU000524}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
single-strand binding protein; K03111 single-strand DNA-binding protein
scnpilot_solids1_trim150_scaffold_76_7
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7613..7933
DNA (321bp) protein (107aa)
ArsR family transcriptional regulator n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FPU4_9RHIZ
ArsR family transcriptional regulator {ECO:0000313|EMBL:ESX82446.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
transcriptional regulator
scnpilot_solids1_trim150_scaffold_76_8
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7930..8367
DNA (438bp) protein (146aa)
UPI0003CFDD7F related cluster n=1 Tax=unknown RepID=UPI0003CFDD7F
ATPase {ECO:0000313|EMBL:ESZ23867.1}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
Activator of Hsp90 ATPase 1 family protein
scnpilot_solids1_trim150_scaffold_76_9
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8379..8984
DNA (606bp) protein (202aa)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444};; Endopeptidase Clp {ECO:0000256|HAMAP-Rule:MF_00444}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
endopeptidase Clp (EC:3.4.21.92); K01358 ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] rbh
ATP-dependent Clp protease proteolytic subunit n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5F5C1_9RHIZ rbh
scnpilot_solids1_trim150_scaffold_76_10
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9491..10810)
DNA (1320bp) protein (440aa)
saccharopine dehydrogenase n=1 Tax=Meganema perideroedes RepID=UPI00036B3607 rbh
Saccharopine dehydrogenase {ECO:0000313|EMBL:EXL09327.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
Saccharopine dehydrogenase-like oxidoreductase rbh
scnpilot_solids1_trim150_scaffold_76_11
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10851..11963)
DNA (1113bp) protein (371aa)
Carboxynorspermidine/carboxyspermidine decarboxylase {ECO:0000256|PIRNR:PIRNR038941}; Short=CANS DC/CAS DC {ECO:0000256|PIRNR:PIRNR038941};; Short=CANSDC/CASDC {ECO:0000256|PIRNR:PIRNR038941};; EC=4.1.1.96 {ECO:0000256|PIRNR:PIRNR038941};; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
nspC; carboxynorspermidine decarboxylase; K13747 carboxynorspermidine decarboxylase [EC:4.1.1.-]
Carboxynorspermidine/carboxyspermidine decarboxylase n=1 Tax=Agrobacterium tumefaciens str. Cherry 2E-2-2 RepID=M8A7P1_RHIRD
scnpilot_solids1_trim150_scaffold_76_12
unknown

Not on your lists

comp(12103..12303)
DNA (201bp) protein (67aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_76_13
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12661..15582
DNA (2922bp) protein (974aa)
Excinuclease ABC subunit A n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FSK5_9RHIZ rbh
UvrABC system protein A {ECO:0000256|HAMAP-Rule:MF_00205, ECO:0000256|SAAS:SAAS00088996}; Short=UvrA protein {ECO:0000256|HAMAP-Rule:MF_00205};; Excinuclease ABC subunit A {ECO:0000256|HAMAP-Rule:MF_00205}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
excinuclease ABC subunit A; K03701 excinuclease ABC subunit A rbh
scnpilot_solids1_trim150_scaffold_76_14
Hoeflea sp. IMCC20628, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15802..16800
DNA (999bp) protein (333aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FBS2_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:AKI01444.1}; TaxID=1620421 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. IMCC20628.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_76_15
unknown

Not on your lists

comp(16777..16962)
DNA (186bp) protein (62aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_76_16
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16998..17240)
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Sinorhizobium fredii USDA 257 RepID=I3WZK4_RHIFR
Uncharacterized protein {ECO:0000313|EMBL:KEC73971.1}; TaxID=1408223 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. phaseoli CCGM1.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_76_17
Allochromatium vinosum, Allochromatium, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17346..17735)
DNA (390bp) protein (130aa)
hypothetical protein n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI0003750060
PilT protein domain protein
PilT protein domain protein {ECO:0000313|EMBL:ADC64119.1}; TaxID=572477 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Allochromatium.;" source="Allochromatium vinosum (strain ATCC 17899 / DSM 180 / NBRC 103801 /; NCIMB 10441 / D) (Chromatium vinosum).;"
scnpilot_solids1_trim150_scaffold_76_18
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17732..18157)
DNA (426bp) protein (142aa)
hypothetical protein n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI0003794C35
Antitoxin of toxin-antitoxin stability system {ECO:0000313|EMBL:EKF57967.1}; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium albertimagni AOL15.;"
prevent-host-death family protein
scnpilot_solids1_trim150_scaffold_76_19
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18303..19127
DNA (825bp) protein (275aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HKM8_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHK58726.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
scnpilot_solids1_trim150_scaffold_76_20

Not on your lists

19231..20031
DNA (801bp) protein (267aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=L7Y0H7_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:AGD93231.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_76_trna_3
unknown

Not on your lists

comp(20147..20229)
DNA (83bp)
transferRNA Leu
scnpilot_solids1_trim150_scaffold_76_21
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20264..21271)
DNA (1008bp) protein (336aa)
Lactone-specific esterase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HRX3_9RHIZ rbh
Lactone-specific esterase {ECO:0000313|EMBL:EHK56528.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
alpha/beta hydrolase fold protein rbh
scnpilot_solids1_trim150_scaffold_76_22
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21468..23117)
DNA (1650bp) protein (550aa)
UPI0003CEAD6C related cluster n=1 Tax=unknown RepID=UPI0003CEAD6C rbh
Heme ABC transporter ATP-binding protein {ECO:0000313|EMBL:ESW88898.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
ABC transporter rbh
scnpilot_solids1_trim150_scaffold_76_23
unknown

Not on your lists

23207..23386
DNA (180bp) protein (60aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_76_24
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23305..24018)
DNA (714bp) protein (238aa)
Nitroreductase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HT28_9RHIZ rbh
Nitroreductase {ECO:0000313|EMBL:EHK56128.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
nitroreductase rbh
scnpilot_solids1_trim150_scaffold_76_25
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24216..26672
DNA (2457bp) protein (819aa)
dimethylglycine dehydrogenase; K00315 dimethylglycine dehydrogenase [EC:1.5.8.4] rbh
Dimethylglycine dehydrogenase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HT30_9RHIZ rbh
Dimethylglycine dehydrogenase {ECO:0000313|EMBL:EHK56130.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
scnpilot_solids1_trim150_scaffold_76_26
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26677..27876
DNA (1200bp) protein (400aa)
aspartate aminotransferase n=1 Tax=Hoeflea sp. 108 RepID=UPI000369B34B rbh
class I and II aminotransferase
Aminotransferase class I and II {ECO:0000313|EMBL:ADV12453.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
scnpilot_solids1_trim150_scaffold_76_27
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27873..30329
DNA (2457bp) protein (819aa)
FAD dependent oxidoreductase n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YCL9_9RHIZ rbh
Sarcosine dehydrogenase {ECO:0000313|EMBL:CDX29539.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
FAD dependent oxidoreductase rbh
scnpilot_solids1_trim150_scaffold_76_28
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30525..32045)
DNA (1521bp) protein (507aa)
Carbohydrate kinase, YjeF related protein n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FAS0_9RHIZ
Carbohydrate kinase, YjeF related protein {ECO:0000313|EMBL:CCV13565.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
carbohydrate kinase, YjeF-like protein
scnpilot_solids1_trim150_scaffold_76_29
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32535..32873
DNA (339bp) protein (113aa)
Nitrogen regulatory protein P-II 1 n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FSK0_9RHIZ
Nitrogen regulatory protein P-II 1 {ECO:0000313|EMBL:ESX82203.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
nitrogen regulatory protein P-II; K04751 nitrogen regulatory protein P-II 1
Displaying items 1-30 of 112 in total

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