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scnpilot_solids1_trim150_scaffold_155

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Displaying items 1-30 of 77 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_155_1
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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98..340
DNA (243bp) protein (81aa)
GYD family protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HPM7_9RHIZ
GYD family protein {ECO:0000313|EMBL:EHK57320.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
GYD family protein
scnpilot_solids1_trim150_scaffold_155_2
Mesorhizobium australicum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(559..2916)
DNA (2358bp) protein (786aa)
Kef-type K+ transport system, membrane component n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KL23_MESAW rbh
Kef-type K+ transport system, membrane component {ECO:0000313|EMBL:AGB45330.1}; Flags: Precursor;; TaxID=754035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073).;"
Kef-type K+ transport system, membrane component rbh
scnpilot_solids1_trim150_scaffold_155_3
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3148..3441
DNA (294bp) protein (98aa)
UPI0003CE1344 related cluster n=1 Tax=unknown RepID=UPI0003CE1344
Uncharacterized protein {ECO:0000313|EMBL:EZQ13318.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_155_4
Acidiphilium sp. JA12-A1, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3531..4457)
DNA (927bp) protein (309aa)
2-dehydropantoate 2-reductase {ECO:0000256|RuleBase:RU003776}; EC=1.1.1.169 {ECO:0000256|RuleBase:RU003776};; TaxID=1464546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. JA12-A1.;"
2-dehydropantoate 2-reductase (EC:1.1.1.169) rbh
hypothetical protein n=1 Tax=Methyloferula stellata RepID=UPI00037AE129 rbh
scnpilot_solids1_trim150_scaffold_155_5
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4468..5277)
DNA (810bp) protein (270aa)
Putative stress protein UspA n=1 Tax=Rhodovulum sp. PH10 RepID=J6LG93_9RHOB
Putative stress protein UspA {ECO:0000313|EMBL:EJW12023.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
UspA domain-containing protein
scnpilot_solids1_trim150_scaffold_155_6
bacterium UASB270, Bacteria

Not on your lists

5555..6547
DNA (993bp) protein (331aa)
Monosaccharide ABC transporter substrate-binding protein, CUT2 family n=1 Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LRR8_ACIC1 rbh
Monosaccharide ABC transporter substrate-binding protein, CUT2 family {ECO:0000313|EMBL:GAK59567.1}; TaxID=1499967 species="Bacteria.;" source="bacterium UASB270.;"
putative simple sugar transport system substrate-binding protein; K02058 simple sugar transport system substrate-binding protein rbh
scnpilot_solids1_trim150_scaffold_155_7
bacterium UASB270, Bacteria

Not on your lists

6609..7373
DNA (765bp) protein (255aa)
ABC transporter-like protein; K02056 simple sugar transport system ATP-binding protein [EC:3.6.3.17]
hypothetical protein n=1 Tax=candidate division OP9 bacterium OP9-cSCG RepID=UPI00037E5FC2
Monosaccharide ABC transporter ATP-binding protein, CUT2 family {ECO:0000313|EMBL:GAK59568.1}; TaxID=1499967 species="Bacteria.;" source="bacterium UASB270.;"
scnpilot_solids1_trim150_scaffold_155_8
bacterium UASB270, Bacteria

Not on your lists

7375..8391
DNA (1017bp) protein (339aa)
hypothetical protein n=1 Tax=candidate division OP9 bacterium OP9-77CS RepID=UPI000366D897 rbh
Inner-membrane translocator {ECO:0000313|EMBL:GAK59569.1}; TaxID=1499967 species="Bacteria.;" source="bacterium UASB270.;"
ABC transporter permease; K02057 simple sugar transport system permease protein rbh
scnpilot_solids1_trim150_scaffold_155_9
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8437..9324
DNA (888bp) protein (296aa)
Short chain dehydrogenase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HPN2_9RHIZ rbh
Short-chain dehydrogenase {ECO:0000313|EMBL:EXL02831.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
short-chain dehydrogenase/reductase SDR; K13775 citronellol/citronellal dehydrogenase rbh
scnpilot_solids1_trim150_scaffold_155_10
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9554..11725)
DNA (2172bp) protein (724aa)
Uncharacterized protein n=1 Tax=Rhizobium loti RepID=M5B2U7_RHILI rbh
Uncharacterized protein {ECO:0000313|EMBL:BAN10186.1}; TaxID=381 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (Mesorhizobium loti).;"
OmpA/MotB domain-containing protein rbh
scnpilot_solids1_trim150_scaffold_155_11
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11912..12358
DNA (447bp) protein (149aa)
UPI0003CF5D17 related cluster n=1 Tax=unknown RepID=UPI0003CF5D17
UPF0260 protein X772_22535 {ECO:0000256|HAMAP-Rule:MF_00676}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_155_12
Nitratireductor basaltis, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12492..12836
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7YH14_MESOW
Uncharacterized protein {ECO:0000313|EMBL:KFB09638.1}; TaxID=472175 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor basaltis.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_155_13
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12910..13641)
DNA (732bp) protein (244aa)
Uncharacterized protein n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2LJQ9_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EKF17984.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
hypothetical protein; K09807 hypothetical protein
scnpilot_solids1_trim150_scaffold_155_trna_1
unknown

Not on your lists

13753..13825
DNA (73bp)
transferRNA Met
scnpilot_solids1_trim150_scaffold_155_14
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13882..15441
DNA (1560bp) protein (520aa)
glyoxalase n=1 Tax=Pseudochrobactrum sp. AO18b RepID=UPI0003AB297D rbh
Phospholipase {ECO:0000313|EMBL:EZQ16907.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
hypothetical protein rbh
scnpilot_solids1_trim150_scaffold_155_15
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15434..15757
DNA (324bp) protein (108aa)
acetyltransferase n=1 Tax=Pseudochrobactrum sp. AO18b RepID=UPI00039FDDBB
Acetyltransferase {ECO:0000313|EMBL:EZQ16908.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_155_16
Phyllobacterium sp. YR531, Phyllobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15925..16872)
DNA (948bp) protein (316aa)
glyoxalase n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00037A3BE3 rbh
Lactoylglutathione lyase-like lyase {ECO:0000313|EMBL:EJM99300.1}; Flags: Precursor;; TaxID=1144343 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Phyllobacterium.;" source="Phyllobacterium sp. YR531.;"
hypothetical protein rbh
scnpilot_solids1_trim150_scaffold_155_17
Paracoccus halophilus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17056..17922
DNA (867bp) protein (289aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002E62D70 rbh
LysR family transcriptional regulator {ECO:0000313|EMBL:KGJ04343.1}; TaxID=376733 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus halophilus.;"
transcriptional regulator, LysR family rbh
scnpilot_solids1_trim150_scaffold_155_18
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17979..18359)
DNA (381bp) protein (127aa)
Cytochrome c-550 n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FD85_9RHIZ
Cytochrome c-550 {ECO:0000313|EMBL:CCV14311.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
cytochrome C; K08738 cytochrome c
scnpilot_solids1_trim150_scaffold_155_19
BJP_IG2158_Rhodobacterales_69_12, Defluviimonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18350..18964)
DNA (615bp) protein (205aa)
Membrane protein, putative n=1 Tax=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) RepID=Q5LL47_RUEPO
hypothetical protein
Tax=BJP_IG2158_Rhodobacterales_69_12
scnpilot_solids1_trim150_scaffold_155_20
BJP_IG2158_Rhodobacterales_69_12, Defluviimonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18961..19563)
DNA (603bp) protein (201aa)
SCO1/SenC family protein n=1 Tax=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) RepID=Q5LL46_RUEPO
SCO1/SenC family protein; K07152
Tax=BJP_IG2158_Rhodobacterales_69_12
scnpilot_solids1_trim150_scaffold_155_21
BJP_08E140C01_Roseovarius_63_250, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19568..21019)
DNA (1452bp) protein (484aa)
UPI0003D6B87B related cluster n=1 Tax=unknown RepID=UPI0003D6B87B rbh
cytochrome c oxidase subunit 1 rbh
Tax=BJP_08E140C01_Roseovarius_63_250
scnpilot_solids1_trim150_scaffold_155_22
BJP_IG2158_Rhodobacterales_69_12, Defluviimonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21030..21527)
DNA (498bp) protein (166aa)
cytochrome c oxidase,ba3-type, subunit I; K02275 cytochrome c oxidase subunit II [EC:1.9.3.1]
Cytochrome c oxidase,ba3-type, subunit I, putative n=1 Tax=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) RepID=Q5LL44_RUEPO
Tax=BJP_IG2158_Rhodobacterales_69_12
scnpilot_solids1_trim150_scaffold_155_23
BJP_IG2158_Rhodobacterales_69_12, Defluviimonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21653..22099
DNA (447bp) protein (149aa)
hypothetical protein n=1 Tax=Robiginitomaculum antarcticum RepID=UPI00036E75DD
Rrf2 family protein
Tax=BJP_IG2158_Rhodobacterales_69_12
scnpilot_solids1_trim150_scaffold_155_24
Nitratireductor aquibiodomus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22304..22615
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Nitratireductor aquibiodomus RA22 RepID=I5C309_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EIM76211.1}; TaxID=1189611 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor aquibiodomus RA22.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_155_25
Ochrobactrum intermedium, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22747..23541
DNA (795bp) protein (265aa)
Thymidylate synthase {ECO:0000256|HAMAP-Rule:MF_00008, ECO:0000256|SAAS:SAAS00215270}; Short=TS {ECO:0000256|HAMAP-Rule:MF_00008};; Short=TSase {ECO:0000256|HAMAP-Rule:MF_00008};; EC=2.1.1.45 {ECO:0000256|HAMAP-Rule:MF_00008, ECO:0000256|SAAS:SAAS00215290};; TaxID=641118 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum intermedium LMG 3301.;"
thyA; thymidylate synthase (EC:1.1.1.213); K00560 thymidylate synthase [EC:2.1.1.45] rbh
Thymidylate synthase n=2 Tax=Ochrobactrum intermedium RepID=C4WF15_9RHIZ rbh
scnpilot_solids1_trim150_scaffold_155_26

Not on your lists

23567..24100
DNA (534bp) protein (178aa)
Dihydrofolate reductase {ECO:0000256|PIRNR:PIRNR000194}; EC=1.5.1.3 {ECO:0000256|PIRNR:PIRNR000194};; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Dihydrofolate reductase (EC:1.5.1.3); K00287 dihydrofolate reductase [EC:1.5.1.3]
Diacylglycerol kinase n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FEC0_9RHIZ
scnpilot_solids1_trim150_scaffold_155_27
Mesorhizobium sp. L2C066B000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24248..25381
DNA (1134bp) protein (378aa)
HflK protein; K04088 membrane protease subunit HflK [EC:3.4.-.-]
UPI0003D05D87 related cluster n=1 Tax=unknown RepID=UPI0003D05D87
Uncharacterized protein {ECO:0000313|EMBL:ESZ42353.1}; TaxID=1287105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C066B000.;"
scnpilot_solids1_trim150_scaffold_155_28
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25378..26349
DNA (972bp) protein (324aa)
Protein HflC n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HTC2_9RHIZ rbh
Protein HflC {ECO:0000256|PIRNR:PIRNR005651}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
membrane protease subunit, stomatin/prohibitin rbh
scnpilot_solids1_trim150_scaffold_155_29
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26363..26548
DNA (186bp) protein (62aa)
Uncharacterized protein n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7YH37_MESOW
Uncharacterized protein {ECO:0000313|EMBL:CDX38766.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
hypothetical protein; K09937 hypothetical protein
Displaying items 1-30 of 77 in total

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