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scnpilot_solids1_trim150_scaffold_193

Search features with annotation key words

Displaying items 1-30 of 65 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_193_1
Mesorhizobium sp. LNHC209A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..527
DNA (525bp) protein (175aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI0003751ECA
Succinylglutamate desuccinylase {ECO:0000313|EMBL:ESY88192.1}; Flags: Fragment;; TaxID=1287226 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC209A00.;"
succinylglutamate desuccinylase/aspartoacylase; K06987
scnpilot_solids1_trim150_scaffold_193_2
Bradyrhizobium sp. CCGE-LA001, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(500..1018)
DNA (519bp) protein (173aa)
Pyridoxal-5'-phosphate-dependent protein beta subunit n=1 Tax=Burkholderia phymatum (strain DSM 17167 / STM815) RepID=B2JXS0_BURP8
Pyridoxal-5'-phosphate-dependent protein beta subunit {ECO:0000313|EMBL:EJZ34213.1}; TaxID=1223566 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. CCGE-LA001.;"
pyridoxal-5'-phosphate-dependent protein beta subunit
scnpilot_solids1_trim150_scaffold_193_3
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1108..1800)
DNA (693bp) protein (231aa)
Transcriptional regulatory protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98P45_RHILO
Transcriptional regulatory protein {ECO:0000313|EMBL:CDX51969.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
transcriptional regulatory protein
scnpilot_solids1_trim150_scaffold_193_4
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1901..2524)
DNA (624bp) protein (208aa)
Acyl-homoserine-lactone synthase {ECO:0000256|RuleBase:RU361135}; EC=2.3.1.184 {ECO:0000256|RuleBase:RU361135};; Autoinducer synthesis protein {ECO:0000256|RuleBase:RU361135}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
UPI0003CE70B2 related cluster n=1 Tax=unknown RepID=UPI0003CE70B2 rbh
autoinducer synthase rbh
scnpilot_solids1_trim150_scaffold_193_5
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2592..3320)
DNA (729bp) protein (243aa)
LuxR family transcriptional regulator n=1 Tax=Rhizobium loti RepID=UPI00037AE9BA rbh
LuxR family transcriptional regulator rbh
Transcriptional regulator, LuxR family {ECO:0000313|EMBL:AEH87288.1}; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
scnpilot_solids1_trim150_scaffold_193_6
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3868..5229
DNA (1362bp) protein (454aa)
threonine synthase-like protein; K01733 threonine synthase [EC:4.2.3.1] rbh
Threonine synthase homolog n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98PA7_RHILO rbh
Threonine synthase homolog {ECO:0000313|EMBL:BAB54748.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
scnpilot_solids1_trim150_scaffold_193_7
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5244..6287)
DNA (1044bp) protein (348aa)
UPI0003CF6631 related cluster n=1 Tax=unknown RepID=UPI0003CF6631 rbh
Cysteine synthase {ECO:0000313|EMBL:CDX37740.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
cysteine synthase rbh
scnpilot_solids1_trim150_scaffold_193_8
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6281..7219)
DNA (939bp) protein (313aa)
kinase n=1 Tax=Rhizobium loti RepID=UPI00036DC3BE rbh
GHMP kinase {ECO:0000313|EMBL:CDX37743.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
GHMP kinase rbh
scnpilot_solids1_trim150_scaffold_193_9
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8051..8737
DNA (687bp) protein (229aa)
Mlr9732 protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98NU9_RHILO
Uncharacterized protein {ECO:0000313|EMBL:CDX12055.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_193_10
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8869..9069
DNA (201bp) protein (67aa)
Msr9733 protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98NU8_RHILO
hypothetical protein
Msr9733 protein {ECO:0000313|EMBL:BAB54907.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
scnpilot_solids1_trim150_scaffold_193_11
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9746..10027
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PGH1_9BRAD
Bradyrhizobium elkanii strain UASWS1015 Contig170, whole genome shotgun sequence {ECO:0000313|EMBL:KIU50294.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
transcriptional regulator
scnpilot_solids1_trim150_scaffold_193_12
Brevundimonas nasdae, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10141..11193
DNA (1053bp) protein (351aa)
Putative replication protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JA86_OLICO
Replication protein {ECO:0000313|EMBL:KIC60521.1}; TaxID=172043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas nasdae.;"
replication protein
scnpilot_solids1_trim150_scaffold_193_13
Brevundimonas nasdae, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11190..11711
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P9I3_9BRAD
Glycosidase {ECO:0000313|EMBL:KIC60518.1}; TaxID=172043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas nasdae.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_193_14
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11708..12253
DNA (546bp) protein (182aa)
Conjugative transfer signal peptidase TraF n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PGG7_9BRAD rbh
Conjugative transfer signal peptidase TraF {ECO:0000313|EMBL:EKS37473.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
traF2; putative conjugal transfer protein TraF
scnpilot_solids1_trim150_scaffold_193_15
Methylobacterium populi, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12320..12667
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) RepID=B1ZGK2_METPB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACB81236.1}; TaxID=441620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001).;"
scnpilot_solids1_trim150_scaffold_193_16
Brevundimonas nasdae, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12671..13432
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P7J4_9BRAD
Lytic transglycosylase {ECO:0000313|EMBL:KIC60515.1}; TaxID=172043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas nasdae.;"
lytic transglycosylase
scnpilot_solids1_trim150_scaffold_193_17
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13677..15416
DNA (1740bp) protein (580aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PCY8_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS37470.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
type IV secretory pathway VirD2 component rbh
scnpilot_solids1_trim150_scaffold_193_18
Brevundimonas nasdae, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15442..17430
DNA (1989bp) protein (663aa)
Conjugal transfer protein TraG n=1 Tax=Sphingobium quisquiliarum P25 RepID=T0HPV4_9SPHN rbh
Conjugal transfer protein TraG {ECO:0000313|EMBL:KIC60514.1}; TaxID=172043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas nasdae.;"
virD4; type IV secretory pathway VirD4 component; K03205 type IV secretion system protein VirD4 rbh
scnpilot_solids1_trim150_scaffold_193_19
Mesorhizobium sp. LNJC405B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17438..17875
DNA (438bp) protein (146aa)
CopG family transcripitonal regulator n=1 Tax=Mesorhizobium sp. L103C120A0 RepID=V7HG21_9RHIZ
CopG family transcripitonal regulator {ECO:0000313|EMBL:ESX86576.1}; TaxID=1287281 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC405B00.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_193_20
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18271..19059)
DNA (789bp) protein (263aa)
Uncharacterized protein n=1 Tax=Agrobacterium tumefaciens F2 RepID=F7UHJ7_RHIRD rbh
Uncharacterized protein {ECO:0000313|EMBL:EGP54066.1}; TaxID=1050720 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens F2.;"
hypothetical protein; K07090 rbh
scnpilot_solids1_trim150_scaffold_193_21
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19107..20789)
DNA (1683bp) protein (561aa)
Oxidoreductase, pyridine nucleotide-disulphide family n=1 Tax=Silicibacter lacuscaerulensis ITI-1157 RepID=D0CRV6_9RHOB rbh
NAD(FAD)-dependent dehydrogenase {ECO:0000313|EMBL:KFL29727.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
flavoprotein oxidoreductase rbh
scnpilot_solids1_trim150_scaffold_193_22
Pseudoxanthomonas spadix, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20832..21272)
DNA (441bp) protein (147aa)
ArsR family transcriptional regulator n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7URV6_PSEUP
ArsR family transcriptional regulator
ArsR family transcriptional regulator {ECO:0000313|EMBL:AER55984.1}; TaxID=1045855 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas spadix (strain BD-a59).;"
scnpilot_solids1_trim150_scaffold_193_23
Nitratireductor basaltis, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21277..22155)
DNA (879bp) protein (293aa)
beta-lactamase (EC:3.1.2.6) rbh
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0I1B6_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KFB09250.1}; TaxID=472175 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor basaltis.;"
scnpilot_solids1_trim150_scaffold_193_24
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22155..22793)
DNA (639bp) protein (213aa)
peroxiredoxin (EC:1.11.1.15); K03386 peroxiredoxin (alkyl hydroperoxide reductase subunit C) [EC:1.11.1.15]
hypothetical protein n=1 Tax=Aureimonas ureilytica RepID=UPI00035C6839
Peroxiredoxin {ECO:0000313|EMBL:GAN76984.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
scnpilot_solids1_trim150_scaffold_193_25
Thioclava sp. 13D2W-2, Thioclava, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22836..23396)
DNA (561bp) protein (187aa)
hypothetical protein n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B6E652
Uncharacterized protein {ECO:0000313|EMBL:KFE34968.1}; TaxID=1317124 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Thioclava.;" source="Thioclava sp. 13D2W-2.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_193_26
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23445..24452)
DNA (1008bp) protein (336aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PUQ4_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS42123.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
cytochrome c, class I rbh
scnpilot_solids1_trim150_scaffold_193_27

Not on your lists

comp(24449..25153)
DNA (705bp) protein (235aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PHI4_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:KKN79071.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
cytochrome c, class I
scnpilot_solids1_trim150_scaffold_193_28
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25264..25692)
DNA (429bp) protein (143aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0I1B9_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHK53281.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
hypothetical protein; K07112
scnpilot_solids1_trim150_scaffold_193_29
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25697..26140)
DNA (444bp) protein (148aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0I3C4_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHK52520.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
YeeE/YedE family protein; K07112
scnpilot_solids1_trim150_scaffold_193_30
Rhizobium sp., Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26314..26934)
DNA (621bp) protein (207aa)
Disulfide bonded thioredoxin protein n=1 Tax=Rhizobium sp. RepID=L0NI62_RHISP
Disulfide bonded thioredoxin protein {ECO:0000313|EMBL:CCF20770.1}; TaxID=391 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp.;"
DSBA oxidoreductase
Displaying items 1-30 of 65 in total

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