name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
scnpilot_solids1_trim150_scaffold_205_1
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
624..2042
|
cydA; cytochrome d ubiquinol oxidase subunit 1 (EC:1.10.3.-); K00425 cytochrome d ubiquinol oxidase subunit I [EC:1.10.3.-]
rbh
Cytochrome d ubiquinol oxidase subunit 1 {ECO:0000313|EMBL:AEI07982.1}; EC=1.10.3.- {ECO:0000313|EMBL:AEI07982.1};; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
Cytochrome D ubiquinol oxidase subunit 1 n=2 Tax=Oligotropha carboxidovorans RepID=B6JD52_OLICO
rbh
|
|
scnpilot_solids1_trim150_scaffold_205_2
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2047..3051
|
cytochrome d ubiquinol oxidase subunit II; K00426 cytochrome d ubiquinol oxidase subunit II [EC:1.10.3.-]
rbh
Cytochrome d ubiquinol oxidase, subunit II n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q12ZZ3_RHOPS
rbh
Cytochrome d ubiquinol oxidase, subunit II {ECO:0000313|EMBL:ABE41596.1}; TaxID=316057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB5).;"
|
|
scnpilot_solids1_trim150_scaffold_205_3
unknown
|
Not on your lists |
3051..3170
|
This feature has no annotations |
|
scnpilot_solids1_trim150_scaffold_205_4
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3250..4149
|
methylenetetrahydrofolate dehydrogenase (EC:1.5.1.5 3.5.4.9); K01491 methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
5,10-methylene-tetrahydrofolate dehydrogenase n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002DBB6AF
Bifunctional protein FolD {ECO:0000256|HAMAP-Rule:MF_01576}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
|
|
scnpilot_solids1_trim150_scaffold_205_5
unknown
|
Not on your lists |
4161..4274
|
This feature has no annotations |
|
scnpilot_solids1_trim150_scaffold_205_6
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
4286..5248
|
Transcriptional regulator n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HXP3_9RHIZ
rbh
Transcriptional regulator {ECO:0000313|EMBL:EHK54520.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain
rbh
|
|
scnpilot_solids1_trim150_scaffold_205_7
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
5294..6340
|
Transcriptional regulator GntR n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HTW1_9RHIZ
rbh
Transcriptional regulator GntR {ECO:0000313|EMBL:EHK55848.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
LacI family transcriptional regulator; K06145 LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
rbh
|
|
scnpilot_solids1_trim150_scaffold_205_8
Mesorhizobium australicum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6567..7688
|
ABC-type sugar transport system, periplasmic component n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KK11_MESAW
rbh
ABC-type sugar transport system, periplasmic component
rbh
ABC-type sugar transport system, periplasmic component {ECO:0000313|EMBL:AGB45692.1}; Flags: Precursor;; TaxID=754035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073).;"
|
|
scnpilot_solids1_trim150_scaffold_205_9
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7756..9312
|
Ribose import ATP-binding protein RbsA {ECO:0000256|HAMAP-Rule:MF_01716}; EC=3.6.3.17 {ECO:0000256|HAMAP-Rule:MF_01716};; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
ribose ABC transporter ATP-binding protein; K02056 simple sugar transport system ATP-binding protein [EC:3.6.3.17]
rbh
ABC transporter n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HTV9_9RHIZ
rbh
|
|
scnpilot_solids1_trim150_scaffold_205_10
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
9309..10289
|
UPI0003CFAFAF related cluster n=1 Tax=unknown RepID=UPI0003CFAFAF
rbh
Sugar ABC transporter permease {ECO:0000313|EMBL:ESZ23629.1}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
inner-membrane translocator
rbh
|
|
scnpilot_solids1_trim150_scaffold_205_11
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
10286..11275
|
UPI0003D05F3E related cluster n=1 Tax=unknown RepID=UPI0003D05F3E
rbh
Putative sugar ABC transporter, permease protein ribose ABC transporter rbsC-like {ECO:0000313|EMBL:CDX33205.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
permease component of ribose/xylose/arabinose/galactoside ABC-type transporters
rbh
|
|
scnpilot_solids1_trim150_scaffold_205_12
Defluviimonas sp. 20V17, Defluviimonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
11305..12219
|
gluconolactonase n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002E07621
rbh
Gluconolactonase {ECO:0000313|EMBL:KDB01619.1}; TaxID=1417296 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Defluviimonas.;" source="Defluviimonas sp. 20V17.;"
|
|
scnpilot_solids1_trim150_scaffold_205_13
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(12241..13608)
|
Uncharacterized protein n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5EXK4_9RHIZ
rbh
Uncharacterized protein {ECO:0000313|EMBL:CCV09822.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
cytochrome P450
rbh
|
|
scnpilot_solids1_trim150_scaffold_205_14
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(13683..14057)
|
Putative fluoride ion transporter CrcB n=1 Tax=Rubellimicrobium thermophilum DSM 16684 RepID=S9SHR3_9RHOB
Putative fluoride ion transporter CrcB {ECO:0000256|HAMAP-Rule:MF_00454}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;"
camphor resistance protein CrcB; K06199 CrcB protein
|
|
scnpilot_solids1_trim150_scaffold_205_15
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14379..16826
|
DNA gyrase subunit B {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363};; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
DNA gyrase subunit B n=1 Tax=Nitratireductor indicus C115 RepID=K2N9E6_9RHIZ
rbh
|
|
scnpilot_solids1_trim150_scaffold_205_16
RBG_16_Armatimonadetes_67_12_curated, Armatimonadetes, Bacteria
|
Not on your lists |
comp(16851..17288)
|
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI000368329B
Tax=RBG_16_Armatimonadetes_67_12_curated
|
|
scnpilot_solids1_trim150_scaffold_205_17
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(17409..18710)
|
TRAP transporter, DctM subunit n=1 Tax=Microvirga sp. WSM3557 RepID=I4YPR3_9RHIZ
rbh
TRAP transporter, DctM subunit {ECO:0000313|EMBL:EIM25955.1}; Flags: Precursor;; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
TRAP dicarboxylate transporter subunit DctM
rbh
|
|
scnpilot_solids1_trim150_scaffold_205_18
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(18707..19162)
|
Tripartite ATP-independent periplasmic transporter DctQ n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HTZ5_9RHIZ
Tripartite ATP-independent periplasmic transporter DctQ {ECO:0000313|EMBL:EHK55789.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
putative TRAP-type C4-dicarboxylate transport system, small permease subunit
|
|
scnpilot_solids1_trim150_scaffold_205_19
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(19316..20302)
|
UPI0003CFA02B related cluster n=1 Tax=unknown RepID=UPI0003CFA02B
rbh
C4-dicarboxylate ABC transporter {ECO:0000313|EMBL:ESZ21504.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
TRAP-type C4-dicarboxylate transport system, periplasmic component
rbh
|
|
scnpilot_solids1_trim150_scaffold_205_20
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(20363..21319)
|
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222};; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
shikimate 5-dehydrogenase; K00014 shikimate dehydrogenase [EC:1.1.1.25]
UPI0003D01CC9 related cluster n=1 Tax=unknown RepID=UPI0003D01CC9
rbh
|
|
scnpilot_solids1_trim150_scaffold_205_21
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
21426..22097
|
UPI0003CFD7F8 related cluster n=1 Tax=unknown RepID=UPI0003CFD7F8
rbh
TetR family transcriptional regulator {ECO:0000313|EMBL:KKB85193.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
transcriptional regulator, TetR family
rbh
|
|
scnpilot_solids1_trim150_scaffold_205_22
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
22491..25517
|
DNA polymerase I n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002E6B684
rbh
DNA polymerase I {ECO:0000313|EMBL:ADV10857.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
|
|
scnpilot_solids1_trim150_scaffold_205_23
Bradyrhizobium sp. DOA9, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
25717..26508
|
High-affinity branched-chain amino acid transport protein (ABC superfamily, ATP-binding) n=1 Tax=Bradyrhizobium sp. STM 3809 RepID=H0T894_9BRAD
rbh
High-affinity branched-chain amino acid transport ATP-binding protein BraF {ECO:0000313|EMBL:GAJ37564.1}; TaxID=1126627 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DOA9.;"
high-affinity branched-chain amino acid transport protein, ABC superfamily, ATP-binding
rbh
|
|
scnpilot_solids1_trim150_scaffold_205_24
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
26505..27218
|
livF; high-affinity branched-chain amino acid transport protein (EC:3.6.3.-); K01996 branched-chain amino acid transport system ATP-binding protein
rbh
Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5ES16_BRASB
rbh
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
|
|
scnpilot_solids1_trim150_scaffold_205_25
Bradyrhizobium sp. DOA9, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
27224..28099
|
Inner-membrane translocator n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q133F9_RHOPS
rbh
High-affinity branched-chain amino acid transport system permease protein LivH {ECO:0000313|EMBL:GAJ37566.1}; TaxID=1126627 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DOA9.;"
inner-membrane translocator; K01997 branched-chain amino acid transport system permease protein
rbh
|
|
scnpilot_solids1_trim150_scaffold_205_26
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
28101..29120
|
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8NQ89_9BRAD
rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS32542.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
inner-membrane translocator; K01998 branched-chain amino acid transport system permease protein
rbh
|
|
scnpilot_solids1_trim150_scaffold_205_27
Bradyrhizobium sp. CCGE-LA001, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
29138..30358
|
branched-chain amino acid ABC transporter substrate-binding protein n=1 Tax=Bradyrhizobium japonicum RepID=UPI00035DE850
Extracellular ligand-binding receptor {ECO:0000313|EMBL:EJZ35227.1}; Flags: Fragment;; TaxID=1223566 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. CCGE-LA001.;"
leucine/isoleucine/valine-binding protein precursor
|
|
scnpilot_solids1_trim150_scaffold_205_28
Mesorhizobium sp. LNHC221B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(30683..31522)
|
Pyrroline-5-carboxylate reductase {ECO:0000256|HAMAP-Rule:MF_01925}; Short=P5C reductase {ECO:0000256|HAMAP-Rule:MF_01925};; Short=P5CR {ECO:0000256|HAMAP-Rule:MF_01925};; EC=1.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01925};; PCA reductase {ECO:0000256|HAMAP-Rule:MF_01925}; TaxID=1287233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC221B00.;"
pyrroline-5-carboxylate reductase (EC:1.5.1.2); K00286 pyrroline-5-carboxylate reductase [EC:1.5.1.2]
PREDICTED: pyrroline-5-carboxylate reductase-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C0FD34
|
|
scnpilot_solids1_trim150_scaffold_205_29
Pseudomonas knackmussii, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(31595..32056)
|
Hypothetical membrane protein {ECO:0000313|EMBL:CDF83119.1}; TaxID=1301098 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas knackmussii (strain DSM 6978 / LMG 23759 / B13).;"
|
|
scnpilot_solids1_trim150_scaffold_205_30
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(32147..32770)
|
Phospholipase/Carboxylesterase n=1 Tax=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) RepID=A6X482_OCHA4
phospholipase/carboxylesterase; K06999 phospholipase/carboxylesterase
Phospholipase/Carboxylesterase {ECO:0000313|EMBL:ABS16036.1}; TaxID=439375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168).;"
|