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scnpilot_solids1_trim150_scaffold_232

Search features with annotation key words

Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_232_1
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(178..3033)
DNA (2856bp) protein (952aa)
TPR repeat-containing protein id=12493048 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein
Tax=RBG_16_Betaproteobacteria_58_11_curated
scnpilot_solids1_trim150_scaffold_232_2
Thioalkalivibrio sulfidiphilus, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3046..4419)
DNA (1374bp) protein (458aa)
Response regulator receiver protein n=1 Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=B8GV82_THISH
response regulator receiver protein; K02481 two-component system, NtrC family, response regulator
Response regulator receiver protein {ECO:0000313|EMBL:ACL73428.1}; TaxID=396588 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio sulfidiphilus (strain HL-EbGR7).;"
scnpilot_solids1_trim150_scaffold_232_3
Phaeospirillum molischianum, Phaeospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4416..6476)
DNA (2061bp) protein (687aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1150626 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Phaeospirillum.;" source="Phaeospirillum molischianum DSM 120.;"
Putative two-component sensor histidine kinase, classical system n=1 Tax=Phaeospirillum molischianum DSM 120 RepID=H8FQC2_PHAMO
integral membrane sensor signal transduction histidine kinase
scnpilot_solids1_trim150_scaffold_232_4
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6644..7747
DNA (1104bp) protein (368aa)
Glycosyl transferase, group 1 n=1 Tax=Phaeospirillum molischianum DSM 120 RepID=H8FQD1_PHAMO
Glycosyl transferase family 1 {ECO:0000313|EMBL:KJB97614.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
group 1 glycosyl transferase
scnpilot_solids1_trim150_scaffold_232_5
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7726..8916)
DNA (1191bp) protein (397aa)
Glycosyltransferase 1 protein {ECO:0000313|EMBL:KFC66158.1}; EC=2.4.1.40 {ECO:0000313|EMBL:KFC66158.1};; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
glycosyltransferase 1 protein (EC:2.4.1.40)
Glycosyl transferase, group 1 n=1 Tax=Caenispirillum salinarum AK4 RepID=K9H5C4_9PROT rbh
scnpilot_solids1_trim150_scaffold_232_6
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8927..10027)
DNA (1101bp) protein (367aa)
Group 1 glycosyl transferase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MTP9_9BURK
Group 1 glycosyl transferase {ECO:0000313|EMBL:GAO26541.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
group 1 glycosyl transferase
scnpilot_solids1_trim150_scaffold_232_7
Blastomonas sp. CACIA14H2, Blastomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10132..11562)
DNA (1431bp) protein (477aa)
UPI0003CFE0D3 related cluster n=1 Tax=unknown RepID=UPI0003CFE0D3
Sugar transferase {ECO:0000313|EMBL:ESZ86745.1}; TaxID=1419876 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Blastomonas.;" source="Blastomonas sp. CACIA14H2.;"
sugar transferase
scnpilot_solids1_trim150_scaffold_232_8
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12059..12697
DNA (639bp) protein (213aa)
Polysaccharide export protein n=1 Tax=gamma proteobacterium IMCC2047 RepID=F3KBQ7_9GAMM
Polysaccharide export protein {ECO:0000313|EMBL:KFC66143.1}; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
polysaccharide export protein; K01991 polysaccharide export outer membrane protein
scnpilot_solids1_trim150_scaffold_232_9
unknown

Not on your lists

12746..14383
DNA (1638bp) protein (546aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_232_10
Thiocystis violascens, Thiocystis, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14394..15461
DNA (1068bp) protein (356aa)
FemAB-related protein, PEP-CTERM system-associated n=1 Tax=Thiocystis violascens (strain ATCC 17096 / DSM 198 / 6111) RepID=I3YGE8_THIV6
FemAB-like protein
FemAB-related protein, PEP-CTERM system-associated {ECO:0000313|EMBL:AFL76066.1}; Flags: Precursor;; TaxID=765911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiocystis.;" source="Thiocystis violascens (strain ATCC 17096 / DSM 198 / 6111) (Chromatium; violascens).;"
scnpilot_solids1_trim150_scaffold_232_11
Candidatus Accumulibacter sp. SK-11, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15427..16905)
DNA (1479bp) protein (493aa)
Polysaccharide biosynthesis protein n=1 Tax=Thauera linaloolentis 47Lol = DSM 12138 RepID=N6Z8B3_9RHOO
Lipopolysaccharide biosynthesis protein WzxC {ECO:0000313|EMBL:EXI76730.1}; TaxID=1454000 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-11.;"
polysaccharide biosynthesis protein
scnpilot_solids1_trim150_scaffold_232_12
Nitrosomonas eutropha, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17848..19425
DNA (1578bp) protein (526aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00037018FD
lipopolysaccharide biosynthesis protein
Lipopolysaccharide biosynthesis {ECO:0000313|EMBL:ABI59152.1}; TaxID=335283 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas eutropha (strain C91).;"
scnpilot_solids1_trim150_scaffold_232_13
Thauera sp. 63, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19422..20372
DNA (951bp) protein (317aa)
protein-tyrosine kinase n=1 Tax=Methylohalobius crimeensis RepID=UPI0003B4DF9C
Protein-tyrosine kinase {ECO:0000313|EMBL:ENO78157.1}; TaxID=497321 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. 63.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_232_14
Phaeospirillum molischianum, Phaeospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20369..21397
DNA (1029bp) protein (343aa)
hypothetical protein n=1 Tax=Kordiimonas gwangyangensis RepID=UPI00037761D3
Uncharacterized protein {ECO:0000313|EMBL:CCG40550.1}; TaxID=1150626 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Phaeospirillum.;" source="Phaeospirillum molischianum DSM 120.;"
ATPase AAA
scnpilot_solids1_trim150_scaffold_232_15
Burkholderiales bacterium GJ-E10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21387..22325
DNA (939bp) protein (313aa)
polysaccharide deacetylase n=1 Tax=Methyloversatilis universalis RepID=UPI00036877DF
Polysaccharide deactylase family protein {ECO:0000313|EMBL:BAP87976.1}; TaxID=1469502 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium GJ-E10.;"
polysaccharide deacetylase
scnpilot_solids1_trim150_scaffold_232_16
Alkalilimnicola ehrlichii, Alkalilimnicola, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22322..23581
DNA (1260bp) protein (420aa)
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI0002E79743
group 1 glycosyl transferase
Glycosyl transferase, group 1 {ECO:0000313|EMBL:ABI55496.1}; TaxID=187272 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Alkalilimnicola.;" source="Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1).;"
scnpilot_solids1_trim150_scaffold_232_17
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23578..25134
DNA (1557bp) protein (519aa)
Exosortase 1 n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C040_NITHN
Membrane protein {ECO:0000313|EMBL:EWY41266.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
exosortase 1
scnpilot_solids1_trim150_scaffold_232_18
Alkalilimnicola ehrlichii, Alkalilimnicola, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25135..27015
DNA (1881bp) protein (627aa)
asparagine synthase (EC:6.3.5.4); K01953 asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
Asparagine synthase (Glutamine-hydrolyzing) {ECO:0000313|EMBL:ABI55493.1}; EC=6.3.5.4 {ECO:0000313|EMBL:ABI55493.1};; TaxID=187272 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Alkalilimnicola.;" source="Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1).;"
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI000306CFA6
scnpilot_solids1_trim150_scaffold_232_19
Thalassomonas actiniarum, Thalassomonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27221..28048
DNA (828bp) protein (276aa)
Uncharacterized protein {ECO:0000313|EMBL:KJE43563.1}; TaxID=485447 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassomonas.;" source="Thalassomonas actiniarum.;"
scnpilot_solids1_trim150_scaffold_232_20
CG_Omnitr_01, Omnitrophica, Bacteria

Not on your lists

comp(28119..29561)
DNA (1443bp) protein (481aa)
Putative uncharacterized protein id=4362583 bin=GWC2_Methylomirabilis_70_24 species=Thiocapsa marina genus=Thiocapsa taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good rbh
hypothetical protein
Tax=CG_Omnitr_01
scnpilot_solids1_trim150_scaffold_232_21
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29800..30831)
DNA (1032bp) protein (344aa)
Uncharacterized protein n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RTW1_ACCPU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV34937.1}; TaxID=522306 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Accumulibacter phosphatis (strain UW-1).;"
scnpilot_solids1_trim150_scaffold_232_22
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31184..32473)
DNA (1290bp) protein (430aa)
polymerase n=1 Tax=Janthinobacterium lividum RepID=UPI000289225C
Uncharacterized protein {ECO:0000313|EMBL:KJB93766.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
O-antigen polymerase
scnpilot_solids1_trim150_scaffold_232_23
Rhodospirillum rubrum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32461..33486)
DNA (1026bp) protein (342aa)
Glycosyl transferase family protein n=2 Tax=Rhodospirillum rubrum RepID=G2TAM5_RHORU
glycosyl transferase family protein
Glycosyl transferase, family 2 {ECO:0000313|EMBL:ABC23885.1}; TaxID=269796 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum rubrum (strain ATCC 11170 / ATH 1.1.1 / DSM 467 / LMG; 4362 / NCIB 8255 / S1).;"
scnpilot_solids1_trim150_scaffold_232_24
RBG_16_Chloroflexi_58_8_curated, Chloroflexi, Bacteria

Not on your lists

comp(33573..34616)
DNA (1044bp) protein (348aa)
hypothetical protein n=1 Tax=Verrucomicrobia bacterium SCGC AAA164-N20 RepID=UPI000377DB55
Tax=RBG_16_Chloroflexi_58_8_curated
scnpilot_solids1_trim150_scaffold_232_25
unknown

Not on your lists

comp(34668..35528)
DNA (861bp) protein (287aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_232_26
Mycobacterium vaccae, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(35763..36842)
DNA (1080bp) protein (360aa)
Cellulose biosynthesis protein CelD-like protein n=1 Tax=Mycobacterium vaccae ATCC 25954 RepID=K0V2Q8_MYCVA
Cellulose biosynthesis protein CelD-like protein {ECO:0000313|EMBL:EJZ11665.1}; TaxID=1194972 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium vaccae ATCC 25954.;"
cellulose biosynthesis protein CelD-like protein
scnpilot_solids1_trim150_scaffold_232_27
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37144..38226
DNA (1083bp) protein (361aa)
Glycosyltransferase, group 1 family protein n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A7K3_9PROT rbh
Glycosyltransferase, group 1 family protein {ECO:0000313|EMBL:EHL96342.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
group 1 glycosyl transferase
scnpilot_solids1_trim150_scaffold_232_28
Rhodocyclaceae bacterium PG1-Ca6, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

38485..39702
DNA (1218bp) protein (406aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00035ED30B
Uncharacterized protein {ECO:0000313|EMBL:AJP48822.1}; TaxID=1565605 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae.;" source="Rhodocyclaceae bacterium PG1-Ca6.;"
scnpilot_solids1_trim150_scaffold_232_29
Streptomyces mutabilis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(39722..40798)
DNA (1077bp) protein (359aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI0003655260
Cellulose biosynthesis protein CelD {ECO:0000313|EMBL:KFG71958.1}; TaxID=67332 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces mutabilis.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_232_30
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(40826..41812)
DNA (987bp) protein (329aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00037FD789 rbh
polysaccharide deacetylase
Polysaccharide deacetylase {ECO:0000313|EMBL:ADU98519.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
Displaying items 1-30 of 42 in total

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