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scnpilot_solids1_trim150_scaffold_386

Search features with annotation key words

Displaying items 1-30 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_386_1
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..565)
DNA (564bp) protein (188aa)
Mlr9360 protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q981I5_RHILO
Uncharacterized protein {ECO:0000313|EMBL:EZQ13435.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_386_2
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(759..1967)
DNA (1209bp) protein (403aa)
Replication protein C n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q981J2_RHILO
Replication initiation protein RepC {ECO:0000313|EMBL:EZQ14533.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
replication initiation protein RepC
scnpilot_solids1_trim150_scaffold_386_3
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2125..3150)
DNA (1026bp) protein (342aa)
Replication protein B n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0I138_9RHIZ rbh
Replication protein B {ECO:0000313|EMBL:EHK53285.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
repB1; replication protein B; K03497 chromosome partitioning protein, ParB family
scnpilot_solids1_trim150_scaffold_386_4
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3154..4362)
DNA (1209bp) protein (403aa)
Replication protein A n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0I139_9RHIZ rbh
Replication protein A {ECO:0000313|EMBL:EHK53286.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
repA; putative replication protein A
scnpilot_solids1_trim150_scaffold_386_5
Mesorhizobium sp. L2C067A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4558..5463)
DNA (906bp) protein (302aa)
UPI0003D0097B related cluster n=1 Tax=unknown RepID=UPI0003D0097B rbh
Transposase ISPsy21 {ECO:0000313|EMBL:ESZ23249.1}; TaxID=1287106 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C067A000.;"
putative transposase for insertion sequence element rbh
scnpilot_solids1_trim150_scaffold_386_6
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5460..5789)
DNA (330bp) protein (110aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HQA4_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHK57076.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_386_7
Mesorhizobium sp. LNHC221B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6096..6359
DNA (264bp) protein (88aa)
UPI0003CEF52E related cluster n=1 Tax=unknown RepID=UPI0003CEF52E
Uncharacterized protein {ECO:0000313|EMBL:ESY73703.1}; TaxID=1287233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC221B00.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_386_8
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6491..7051
DNA (561bp) protein (187aa)
UPI0003CE69C7 related cluster n=1 Tax=unknown RepID=UPI0003CE69C7
Uncharacterized protein {ECO:0000313|EMBL:EZQ14537.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_386_9
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7100..8326)
DNA (1227bp) protein (409aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8NUU9_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS32936.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
phage integrase
scnpilot_solids1_trim150_scaffold_386_10
Chlorobium phaeobacteroides, Chlorobium, Chlorobiales, Chlorobia, Chlorobi, Bacteria

Not on your lists

comp(8329..8853)
DNA (525bp) protein (175aa)
Putative uncharacterized protein n=1 Tax=Chlorobium phaeobacteroides (strain BS1) RepID=B3EP85_CHLPB
N-acetyltransferase GCN5
Uncharacterized protein {ECO:0000313|EMBL:ACE05224.1}; TaxID=331678 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobium/Pelodictyon group; Chlorobium.;" source="Chlorobium phaeobacteroides (strain BS1).;"
scnpilot_solids1_trim150_scaffold_386_11
Pelobacter propionicus, Pelobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8850..9131)
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Pelobacter propionicus (strain DSM 2379) RepID=A0R860_PELPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABL01427.1}; TaxID=338966 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Pelobacteraceae; Pelobacter.;" source="Pelobacter propionicus (strain DSM 2379).;"
scnpilot_solids1_trim150_scaffold_386_12
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9333..10379
DNA (1047bp) protein (349aa)
Mlr9360 protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q981I5_RHILO rbh
Uncharacterized protein {ECO:0000313|EMBL:EXL04914.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
hypothetical protein rbh
scnpilot_solids1_trim150_scaffold_386_13
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10385..11089
DNA (705bp) protein (235aa)
Putative transcriptional regulator n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11AK1_MESSB
putative transcriptional regulator
Putative transcriptional regulator {ECO:0000313|EMBL:ABG65574.1}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
scnpilot_solids1_trim150_scaffold_386_14
Methylobacterium oryzae, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11459..12334
DNA (876bp) protein (292aa)
transcriptional regulator n=1 Tax=Methylobacterium sp. 285MFTsu5.1 RepID=UPI0003829D6E rbh
AraC family transcriptional regulator {ECO:0000313|EMBL:AIQ91395.1}; TaxID=693986 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium oryzae CBMB20.;"
AraC family transcriptional regulator rbh
scnpilot_solids1_trim150_scaffold_386_15
Hoeflea sp. BAL378, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12430..15402
DNA (2973bp) protein (991aa)
cutL; carbon monoxide dehydrogenase (EC:1.2.99.2); K03520 carbon-monoxide dehydrogenase large subunit [EC:1.2.99.2] rbh
Aldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4EZH5_9RHIZ rbh
Carbon monoxide dehydrogenase {ECO:0000313|EMBL:KGF68621.1}; TaxID=1547437 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. BAL378.;"
scnpilot_solids1_trim150_scaffold_386_16
Methylobacterium sp. 4-46, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15399..16226
DNA (828bp) protein (276aa)
FAD-binding molybdopterin dehydrogenase; K03519 carbon-monoxide dehydrogenase medium subunit [EC:1.2.99.2]
Molybdopterin dehydrogenase FAD-binding n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UHY8_METS4
Molybdopterin dehydrogenase FAD-binding {ECO:0000313|EMBL:ACA15820.1}; TaxID=426117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. (strain 4-46).;"
scnpilot_solids1_trim150_scaffold_386_17
Roseovarius sp. BRH_c41, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16214..16723
DNA (510bp) protein (170aa)
2Fe-2S iron-sulfur cluster binding domain-containing protein; K03518 carbon-monoxide dehydrogenase small subunit [EC:1.2.99.2]
Carbon monoxide dehydrogenase small chain n=1 Tax=Dinoroseobacter shibae (strain DFL 12) RepID=A8LT85_DINSH
(2Fe-2S)-binding protein {ECO:0000313|EMBL:KJS41417.1}; TaxID=1629709 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseovarius.;" source="Roseovarius sp. BRH_c41.;"
scnpilot_solids1_trim150_scaffold_386_18
Rhizobium sp. PDO1-076, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16716..18269
DNA (1554bp) protein (518aa)
AMP-dependent synthetase and ligase n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4EZH8_9RHIZ rbh
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:EHS54171.1}; TaxID=1125979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. PDO1-076.;"
AMP-dependent synthetase and ligase rbh
scnpilot_solids1_trim150_scaffold_386_19
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18266..19063
DNA (798bp) protein (266aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NLZ1_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:EKS30136.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
enoyl-CoA hydratase/isomerase
scnpilot_solids1_trim150_scaffold_386_20
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19116..20291
DNA (1176bp) protein (392aa)
ABC transporter substrate-binding protein n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI00034DA35E rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS41116.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
extracellular ligand-binding receptor; K01999 branched-chain amino acid transport system substrate-binding protein rbh
scnpilot_solids1_trim150_scaffold_386_21
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20318..21208
DNA (891bp) protein (297aa)
ABC transporter permease n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI0003497001 rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS41117.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
inner-membrane translocator; K01997 branched-chain amino acid transport system permease protein rbh
scnpilot_solids1_trim150_scaffold_386_22
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21201..22190
DNA (990bp) protein (330aa)
ABC transporter permease n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI0003B4A677 rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS41118.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
inner-membrane translocator; K01998 branched-chain amino acid transport system permease protein rbh
scnpilot_solids1_trim150_scaffold_386_23
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22187..22936
DNA (750bp) protein (250aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PJZ8_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS41119.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
ABC transporter-like protein; K01995 branched-chain amino acid transport system ATP-binding protein rbh
scnpilot_solids1_trim150_scaffold_386_24
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22933..23640
DNA (708bp) protein (236aa)
ABC transporter n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI00034B7900 rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS41120.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
ABC transporter-like protein; K01996 branched-chain amino acid transport system ATP-binding protein rbh
scnpilot_solids1_trim150_scaffold_386_25
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23711..24421
DNA (711bp) protein (237aa)
transposase n=1 Tax=Martelella mediterranea RepID=UPI0003750124 rbh
integrase catalytic region; K07498 putative transposase rbh
Integrase catalytic region {ECO:0000313|EMBL:ABS17196.1}; TaxID=439375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168).;"
scnpilot_solids1_trim150_scaffold_386_26
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24520..25158
DNA (639bp) protein (213aa)
Putative transposase protein n=1 Tax=Sinorhizobium fredii USDA 257 RepID=I3X506_RHIFR
transposase protein
Putative transposase protein {ECO:0000313|EMBL:AFL50962.1}; TaxID=1185652 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium fredii USDA 257.;"
scnpilot_solids1_trim150_scaffold_386_27
Sphingobium sp. ba1, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25310..25831
DNA (522bp) protein (174aa)
Phage integrase, N-terminal SAM-like domain protein n=1 Tax=Exiguobacterium sp. S17 RepID=S3FBE7_9BACL
Integrase/recombinase XerC {ECO:0000313|EMBL:KFL45240.1}; TaxID=1522072 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. ba1.;"
integrase family protein
scnpilot_solids1_trim150_scaffold_386_28
Asticcacaulis benevestitus, Asticcacaulis, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25982..26263
DNA (282bp) protein (94aa)
transposase n=1 Tax=Sphingomonas sp. PAMC 26621 RepID=UPI00028A0E85
Transposase IS110 {ECO:0000313|EMBL:ESQ92871.1}; TaxID=1121022 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis.;" source="Asticcacaulis benevestitus DSM 16100 = ATCC BAA-896.;"
transposase
scnpilot_solids1_trim150_scaffold_386_29
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26241..26501
DNA (261bp) protein (87aa)
transposase n=1 Tax=Sphingomonas sp. PAMC 26621 RepID=UPI00028A0E85
Transposase {ECO:0000313|EMBL:KHA63310.1}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. Ant20.;"
transposase
scnpilot_solids1_trim150_scaffold_386_30
Sphingobium quisquiliarum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26987..27400)
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Sphingobium quisquiliarum P25 RepID=T0GVV8_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB08116.1}; TaxID=1329909 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium quisquiliarum P25.;"
HxlR family transcriptional regulator
Displaying items 1-30 of 45 in total

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