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scnpilot_solids1_trim150_scaffold_423

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Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_423_1
RBG_16_Chloroflexi_57_11_curated, Chloroflexi, Bacteria

Not on your lists

comp(296..1276)
DNA (981bp) protein (327aa)
Putative oligopeptide ABC transporter ATP-binding protein n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I1L3_CALAS rbh
putative oligopeptide ABC transporter ATP-binding protein; K02032 peptide/nickel transport system ATP-binding protein rbh
Tax=RBG_16_Chloroflexi_57_11_curated
scnpilot_solids1_trim150_scaffold_423_2
RBG_16_Chloroflexi_57_11_curated, Chloroflexi, Bacteria

Not on your lists

comp(1281..2249)
DNA (969bp) protein (323aa)
oligopeptide/dipeptide ABC transporter, ATPase subunit (EC:3.6.3.24) rbh
Oligopeptide/dipeptide ABC transporter, ATPase subunit n=1 Tax=Gloeocapsa sp. PCC 7428 RepID=K9XGC5_9CHRO rbh
Tax=RBG_16_Chloroflexi_57_11_curated
scnpilot_solids1_trim150_scaffold_423_3
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2242..3645)
DNA (1404bp) protein (468aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI00030924B2 rbh
Aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A {ECO:0000313|EMBL:KFC76056.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
Putative amidase rbh
scnpilot_solids1_trim150_scaffold_423_4
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3668..4426)
DNA (759bp) protein (253aa)
3-oxoacyl-acyl carrier protein reductase {ECO:0000313|EMBL:KFC76057.1}; EC=1.1.1.100 {ECO:0000313|EMBL:KFC76057.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI000305F905 rbh
fabG; short-chain dehydrogenase/reductase SDR rbh
scnpilot_solids1_trim150_scaffold_423_5
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4436..5197)
DNA (762bp) protein (254aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002E243FC rbh
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:KFC76058.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
short-chain dehydrogenase/reductase SDR
scnpilot_solids1_trim150_scaffold_423_6
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5194..6015)
DNA (822bp) protein (274aa)
Polysaccharide deacetylase n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1BC67_PARDP rbh
Putative xylanase/chitin deacetylase {ECO:0000313|EMBL:KFC76059.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
polysaccharide deacetylase rbh
scnpilot_solids1_trim150_scaffold_423_7

Not on your lists

comp(6076..6909)
DNA (834bp) protein (278aa)
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LFW1_SYNFM
Uncharacterized protein {ECO:0000313|EMBL:KKK80207.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
scnpilot_solids1_trim150_scaffold_423_8
Gordonia terrae, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6950..7864)
DNA (915bp) protein (305aa)
ABC-type uncharacterized transport system, duplicated ATPase component n=1 Tax=Gordonia terrae C-6 RepID=R7Y7T7_9ACTO
ABC-type uncharacterized transport system, duplicated ATPase component {ECO:0000313|EMBL:EON32106.1}; TaxID=1316928 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia terrae C-6.;"
ABC-type uncharacterized transport system, duplicated ATPase component
scnpilot_solids1_trim150_scaffold_423_9
Devosia insulae, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7889..8839)
DNA (951bp) protein (317aa)
ABC-type dipeptide/oligopeptide/nickel transport system, permease component n=1 Tax=Deinococcus peraridilitoris (strain DSM 19664 / LMG 22246 / CIP 109416 / KR-200) RepID=L0A8G4_DEIPD
Glutathione ABC transporter permease {ECO:0000313|EMBL:KKB78530.1}; TaxID=1116389 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia insulae DS-56.;"
dipeptide/oligopeptide/nickel ABC transporter permease
scnpilot_solids1_trim150_scaffold_423_10
Rhizobium sp. CF080, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8969..10513)
DNA (1545bp) protein (515aa)
ABC transporter periplasmic protein n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2MCJ4_9RHIZ
ABC-type transporter, periplasmic subunit {ECO:0000313|EMBL:EUB99869.1}; TaxID=1144310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF080.;"
family 5 extracellular solute-binding protein; K02035 peptide/nickel transport system substrate-binding protein
scnpilot_solids1_trim150_scaffold_423_11
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10660..11175)
DNA (516bp) protein (172aa)
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI0003604516
Putative transcriptional regulator, MarR family {ECO:0000313|EMBL:KFC76065.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
pecS; MarR family transcriptional regulator
scnpilot_solids1_trim150_scaffold_423_12
Pelagibaca bermudensis, Pelagibaca, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12369..13223
DNA (855bp) protein (285aa)
Uncharacterized protein n=1 Tax=Pelagibaca bermudensis (strain JCM 13377 / KCTC 12554 / HTCC2601) RepID=Q0FX15_PELBH rbh
Uncharacterized protein {ECO:0000313|EMBL:EAU48387.1}; TaxID=314265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Pelagibaca.;" source="Pelagibaca bermudensis (strain JCM 13377 / KCTC 12554 / HTCC2601).;"
amidohydrolase; K07045
scnpilot_solids1_trim150_scaffold_423_13
Pelagibaca bermudensis, Pelagibaca, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13229..14671
DNA (1443bp) protein (481aa)
AMP-dependent synthetase and ligase; K01897 long-chain acyl-CoA synthetase [EC:6.2.1.3]
Acyl-CoA synthase n=1 Tax=Pelagibaca bermudensis (strain JCM 13377 / KCTC 12554 / HTCC2601) RepID=Q0FX11_PELBH rbh
Acyl-CoA synthase {ECO:0000313|EMBL:EAU48391.1}; TaxID=314265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Pelagibaca.;" source="Pelagibaca bermudensis (strain JCM 13377 / KCTC 12554 / HTCC2601).;"
scnpilot_solids1_trim150_scaffold_423_14
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14812..15660
DNA (849bp) protein (283aa)
hypothetical protein n=1 Tax=Sphingomonas wittichii RepID=UPI0002E6E74B
Carboxy-lyase {ECO:0000313|EMBL:AHH95455.1}; TaxID=1449976 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
acetoacetate decarboxylase
scnpilot_solids1_trim150_scaffold_423_15
Pelagibaca bermudensis, Pelagibaca, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15700..16725
DNA (1026bp) protein (342aa)
Uncharacterized protein n=1 Tax=Pelagibaca bermudensis (strain JCM 13377 / KCTC 12554 / HTCC2601) RepID=Q0FX20_PELBH
Uncharacterized protein {ECO:0000313|EMBL:EAU48382.1}; TaxID=314265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Pelagibaca.;" source="Pelagibaca bermudensis (strain JCM 13377 / KCTC 12554 / HTCC2601).;"
NMT1/THI5 like domain-containing protein; K02051 NitT/TauT family transport system substrate-binding protein
scnpilot_solids1_trim150_scaffold_423_16
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16691..17338
DNA (648bp) protein (216aa)
Uncharacterized protein n=1 Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2B539_STRRD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:GAO56603.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
scnpilot_solids1_trim150_scaffold_423_17
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17331..18143
DNA (813bp) protein (271aa)
ABC transporter ATP-binding protein n=1 Tax=Amycolatopsis methanolica RepID=UPI0003798BB6
ABC transporter ATP-binding protein {ECO:0000313|EMBL:AIJ23910.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;"
ABC transporter-like protein; K02049 NitT/TauT family transport system ATP-binding protein
scnpilot_solids1_trim150_scaffold_423_18
Saccharomonospora marina, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18158..18925
DNA (768bp) protein (256aa)
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component n=1 Tax=Saccharomonospora marina XMU15 RepID=H5X1N4_9PSEU
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component {ECO:0000313|EMBL:EHR50897.1}; TaxID=882083 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora marina XMU15.;"
binding-protein-dependent transport system inner membrane protein; K02050 NitT/TauT family transport system permease protein
scnpilot_solids1_trim150_scaffold_423_19
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18954..19799
DNA (846bp) protein (282aa)
Uncharacterized protein n=1 Tax=Pelagibaca bermudensis (strain JCM 13377 / KCTC 12554 / HTCC2601) RepID=Q0FX15_PELBH
putative TIM-barrel fold metal-dependent hydrolase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
scnpilot_solids1_trim150_scaffold_423_20
Pelagibaca bermudensis, Pelagibaca, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19916..20701
DNA (786bp) protein (262aa)
Putative GntR-family transcriptional regulator n=1 Tax=Pelagibaca bermudensis (strain JCM 13377 / KCTC 12554 / HTCC2601) RepID=Q0FX03_PELBH
Putative GntR-family transcriptional regulator {ECO:0000313|EMBL:EAU48399.1}; TaxID=314265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Pelagibaca.;" source="Pelagibaca bermudensis (strain JCM 13377 / KCTC 12554 / HTCC2601).;"
transcriptional regulator, GntR family
scnpilot_solids1_trim150_scaffold_423_21
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20795..21121)
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5ET04_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CCV07367.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_423_22
Sulfitobacter mediterraneus, Sulfitobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21236..22018)
DNA (783bp) protein (261aa)
Putative short chain dehydrogenase n=1 Tax=Roseobacter litoralis (strain ATCC 49566 / DSM 6996 / JCM 21268 / NBRC 15278 / OCh 149) RepID=F7ZI78_ROSLO rbh
Short-chain dehydrogenase {ECO:0000313|EMBL:KAJ02602.1}; TaxID=83219 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sulfitobacter.;" source="Sulfitobacter mediterraneus.;"
short chain dehydrogenase rbh
scnpilot_solids1_trim150_scaffold_423_23
Sulfitobacter mediterraneus, Sulfitobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22078..23007)
DNA (930bp) protein (310aa)
Uncharacterized protein n=1 Tax=Oceanicola granulosus HTCC2516 RepID=Q2CEL3_9RHOB rbh
Uncharacterized protein {ECO:0000313|EMBL:KAJ02600.1}; TaxID=83219 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sulfitobacter.;" source="Sulfitobacter mediterraneus.;"
hypothetical protein rbh
scnpilot_solids1_trim150_scaffold_423_24
Roseobacter litoralis, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23009..23959)
DNA (951bp) protein (317aa)
3-hydroxyacyl-CoA dehydrogenase n=1 Tax=Roseobacter litoralis (strain ATCC 49566 / DSM 6996 / JCM 21268 / NBRC 15278 / OCh 149) RepID=F7ZI81_ROSLO rbh
3-hydroxyacyl-CoA dehydrogenase rbh
3-hydroxyacyl-CoA dehydrogenase {ECO:0000313|EMBL:AEI96217.1}; TaxID=391595 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source="Roseobacter litoralis (strain ATCC 49566 / DSM 6996 / JCM 21268 / NBRC; 15278 / OCh 149).;"
scnpilot_solids1_trim150_scaffold_423_25
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(24035..25201)
DNA (1167bp) protein (389aa)
Inner-membrane translocator n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C9J8_SPHTD
inner-membrane translocator; K10544 D-xylose transport system permease protein
Inner-membrane translocator {ECO:0000313|EMBL:ACZ40491.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
scnpilot_solids1_trim150_scaffold_423_26
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(25270..26046)
DNA (777bp) protein (259aa)
ABC transporter related protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C9J9_SPHTD rbh
ABC transporter rbh
ABC transporter related protein {ECO:0000313|EMBL:ACZ40492.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
scnpilot_solids1_trim150_scaffold_423_27
Acidiphilium sp. PM, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26086..27225)
DNA (1140bp) protein (380aa)
monosaccharide-transporting ATPase (EC:3.6.3.17); K10543 D-xylose transport system substrate-binding protein
Monosaccharide ABC transporter substrate-binding protein, CUT2 family n=3 Tax=Acidiphilium RepID=A5FZZ2_ACICJ
Monosaccharide-transporting ATPase {ECO:0000313|EMBL:EGO96333.1}; TaxID=1043206 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. PM.;"
scnpilot_solids1_trim150_scaffold_423_28
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27425..28303
DNA (879bp) protein (293aa)
SMP-30/Gluconolaconase/LRE domain protein n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5F6W8_9RHIZ rbh
SMP-30/Gluconolaconase/LRE domain protein {ECO:0000313|EMBL:CCV12041.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
SMP-30/gluconolaconase/LRE-like region-containing protein rbh
scnpilot_solids1_trim150_scaffold_423_29
Oceanicola granulosus, Oceanicola, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28370..29455
DNA (1086bp) protein (362aa)
Transcriptional regulator (LacI family protein) n=1 Tax=Oceanicola granulosus HTCC2516 RepID=Q2CEL5_9RHOB rbh
Transcriptional regulator (LacI family protein) {ECO:0000313|EMBL:EAR51117.1}; TaxID=314256 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oceanicola.;" source="Oceanicola granulosus (strain ATCC BAA-861 / DSM 15982 / KCTC 12143 /; HTCC2516).;"
HTH-type LacI family transcriptional regulator; K02529 LacI family transcriptional regulator rbh
scnpilot_solids1_trim150_scaffold_423_30
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29977..31557
DNA (1581bp) protein (527aa)
AMP-dependent synthetase and ligase n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IMQ4_XANP2 rbh
AMP-dependent synthetase and ligase rbh
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:ABS69297.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
Displaying items 1-30 of 40 in total

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