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scnpilot_solids1_trim150_scaffold_460

Search features with annotation key words

Displaying items 1-30 of 52 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_460_1
unknown

Not on your lists

comp(1..105)
DNA (105bp) protein (35aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_460_2
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

303..989
DNA (687bp) protein (229aa)
UPI0003CFF785 related cluster n=1 Tax=unknown RepID=UPI0003CFF785
Transposase {ECO:0000313|EMBL:CDX53162.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
transcriptional regulator; K07497 putative transposase
scnpilot_solids1_trim150_scaffold_460_3
Mesorhizobium australicum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1213..3303
DNA (2091bp) protein (697aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=754035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073).;"
DNA/RNA helicase, superfamily I n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KQU8_MESAW rbh
DNA/RNA helicase, superfamily I rbh
scnpilot_solids1_trim150_scaffold_460_4
Phyllobacterium sp. YR531, Phyllobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3325..3696)
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Phyllobacterium sp. YR531 RepID=J3HUI6_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EJN06276.1}; TaxID=1144343 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Phyllobacterium.;" source="Phyllobacterium sp. YR531.;"
scnpilot_solids1_trim150_scaffold_460_5
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3903..4664
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QHN2_BREDI
Inducible mutagenesis protein ImuA 2 {ECO:0000313|EMBL:CDN94485.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;"
hypothetical protein; K14160 protein ImuA
scnpilot_solids1_trim150_scaffold_460_6
Xanthomonas axonopodis, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4678..5598
DNA (921bp) protein (307aa)
hypothetical protein n=1 Tax=Xanthomonas sp. M97 RepID=UPI0003A90CA8
UPF0753 protein XAPC_603 {ECO:0000256|HAMAP-Rule:MF_01871}; TaxID=1085630 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas axonopodis pv. punicae str. LMG 859.;"
hypothetical protein; K09822 hypothetical protein
scnpilot_solids1_trim150_scaffold_460_7
unknown

Not on your lists

5669..5890
DNA (222bp) protein (74aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_460_8
Agrobacterium rhizogenes, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5908..6075
DNA (168bp) protein (56aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002DE3A39
Uncharacterized protein {ECO:0000313|EMBL:KEA08210.1}; TaxID=359 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium rhizogenes.;"
scnpilot_solids1_trim150_scaffold_460_9
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6452..6925)
DNA (474bp) protein (158aa)
Transcriptional regulatory protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98A76_RHILO
transcriptional regulatory protein
Transcriptional regulatory protein {ECO:0000313|EMBL:BAB52461.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
scnpilot_solids1_trim150_scaffold_460_10
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7153..9042)
DNA (1890bp) protein (630aa)
heat shock protein Hsp90 n=1 Tax=Rhizobium loti RepID=UPI00035DF295 rbh
Chaperone protein HtpG {ECO:0000256|HAMAP-Rule:MF_00505, ECO:0000256|SAAS:SAAS00218406}; Heat shock protein HtpG {ECO:0000256|HAMAP-Rule:MF_00505}; High temperature protein G {ECO:0000256|HAMAP-Rule:MF_00505}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
heat shock protein 90; K04079 molecular chaperone HtpG rbh
scnpilot_solids1_trim150_scaffold_460_11
Mesorhizobium australicum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9151..9447)
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KJM7_MESAW
Protein of unknown function (DUF982)
Uncharacterized protein {ECO:0000313|EMBL:AGB45542.1}; TaxID=754035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073).;"
scnpilot_solids1_trim150_scaffold_460_12
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9428..9841)
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7YBJ1_MESOW
Uncharacterized protein {ECO:0000313|EMBL:CDX24498.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_460_13
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9873..10097)
DNA (225bp) protein (75aa)
UPI0003CFAAD4 related cluster n=1 Tax=unknown RepID=UPI0003CFAAD4
Uncharacterized protein {ECO:0000313|EMBL:ESZ18748.1}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_460_14
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10167..11795)
DNA (1629bp) protein (543aa)
60 kDa chaperonin n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TBW1_MESCW rbh
chaperonin GroEL; K04077 chaperonin GroEL rbh
60 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00600, ECO:0000256|RuleBase:RU000419}; GroEL protein {ECO:0000256|HAMAP-Rule:MF_00600}; Protein Cpn60 {ECO:0000256|HAMAP-Rule:MF_00600}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
scnpilot_solids1_trim150_scaffold_460_15
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11847..12161)
DNA (315bp) protein (105aa)
10 kDa chaperonin 2 n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=CH102_RHILO
10 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00580, ECO:0000256|RuleBase:RU000535}; GroES protein {ECO:0000256|HAMAP-Rule:MF_00580}; Protein Cpn10 {ECO:0000256|HAMAP-Rule:MF_00580}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
groES; co-chaperonin GroES; K04078 chaperonin GroES
scnpilot_solids1_trim150_scaffold_460_16
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12492..12833
DNA (342bp) protein (114aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YFF9_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CDX22203.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_460_17
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12855..13133
DNA (279bp) protein (93aa)
UPI0003D06AEA related cluster n=1 Tax=unknown RepID=UPI0003D06AEA
Protein usg {ECO:0000313|EMBL:ESZ18751.1}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
Usg family protein
scnpilot_solids1_trim150_scaffold_460_18
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13117..13449)
DNA (333bp) protein (111aa)
UPI0003CE9EC7 related cluster n=1 Tax=unknown RepID=UPI0003CE9EC7
Uncharacterized protein {ECO:0000313|EMBL:CDX22201.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_460_19
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13577..13795)
DNA (219bp) protein (73aa)
hypothetical protein n=1 Tax=Rhizobium loti RepID=UPI00035D8E23
hypothetical protein
Msr2388 protein {ECO:0000313|EMBL:BAB49532.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
scnpilot_solids1_trim150_scaffold_460_20
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14023..14499
DNA (477bp) protein (159aa)
Small heat shock protein hspD n=3 Tax=Ochrobactrum intermedium RepID=C4WQV9_9RHIZ
Heat shock chaperone {ECO:0000313|EMBL:CDX61758.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
hspB2; small heat shock protein HspB; K04080 molecular chaperone IbpA
scnpilot_solids1_trim150_scaffold_460_21
Ochrobactrum intermedium, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14596..15105
DNA (510bp) protein (170aa)
molecular chaperone Hsp20 n=1 Tax=Rhizobium mongolense RepID=UPI0003B4CA3F
Small heat shock protein HspB {ECO:0000313|EMBL:ELT49278.1}; TaxID=1234597 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum intermedium M86.;"
heat shock protein Hsp20; K13993 HSP20 family protein
scnpilot_solids1_trim150_scaffold_460_22
unknown

Not on your lists

comp(16126..16260)
DNA (135bp) protein (45aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_460_23
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16330..16770)
DNA (441bp) protein (147aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00037D88B8
Mechanosensitive ion channel protein MscS {ECO:0000313|EMBL:KKB10013.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
small conductance mechanosensitive ion channel (MscS) family protein; K16053 miniconductance mechanosensitive channel
scnpilot_solids1_trim150_scaffold_460_24
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16921..17115)
DNA (195bp) protein (65aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00037D88B8
Mechanosensitive ion channel protein MscS {ECO:0000313|EMBL:KKB10013.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
scnpilot_solids1_trim150_scaffold_460_25
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17149..17532)
DNA (384bp) protein (128aa)
Transcription regulator protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HQ07_9RHIZ
Transcription regulator protein {ECO:0000313|EMBL:EHK57197.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
transcription regulator protein
scnpilot_solids1_trim150_scaffold_460_26
Ruegeria lacuscaerulensis, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17627..18118)
DNA (492bp) protein (164aa)
Glycine betaine transporter OpuD n=1 Tax=Silicibacter lacuscaerulensis ITI-1157 RepID=D0CS64_9RHOB
Glycine betaine transporter OpuD {ECO:0000313|EMBL:EEX11047.1}; TaxID=644107 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Silicibacter lacuscaerulensis ITI-1157.;"
transporter, BCCT family
scnpilot_solids1_trim150_scaffold_460_27
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18552..19988)
DNA (1437bp) protein (479aa)
Aspartate kinase {ECO:0000313|EMBL:KKB07423.1}; EC=2.7.2.4 {ECO:0000313|EMBL:KKB07423.1};; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
aspartokinase associated with ectoine biosynthesis; K00928 aspartate kinase [EC:2.7.2.4] rbh
Aspartokinase associated with ectoine biosynthesis n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RBN6_PELHB rbh
scnpilot_solids1_trim150_scaffold_460_28
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20051..20980)
DNA (930bp) protein (310aa)
ectoine hydroxylase; K10674 ectoine hydroxylase [EC:1.14.11.-] rbh
Ectoine hydroxylase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RBN5_PELHB rbh
Ectoine hydroxylase {ECO:0000313|EMBL:KKB84368.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
scnpilot_solids1_trim150_scaffold_460_29
Pelagibacterium halotolerans, Pelagibacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21028..21426)
DNA (399bp) protein (133aa)
L-ectoine synthase; K06720 L-ectoine synthase [EC:4.2.1.108]
L-ectoine synthase {ECO:0000256|HAMAP-Rule:MF_01255}; EC=4.2.1.108 {ECO:0000256|HAMAP-Rule:MF_01255};; N-acetyldiaminobutyrate dehydratase {ECO:0000256|HAMAP-Rule:MF_01255}; TaxID=1082931 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Pelagibacterium.;" source="Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2).;"
L-ectoine synthase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RBN4_PELHB
scnpilot_solids1_trim150_scaffold_460_30
Pelagibacterium halotolerans, Pelagibacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21439..22737)
DNA (1299bp) protein (433aa)
diaminobutyrate-pyruvate aminotransferase; K00836 diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76] rbh
Diaminobutyrate-pyruvate aminotransferase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RBN3_PELHB rbh
Diaminobutyrate-pyruvate aminotransferase {ECO:0000313|EMBL:AEQ53674.1}; TaxID=1082931 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Pelagibacterium.;" source="Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2).;"
Displaying items 1-30 of 52 in total

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