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scnpilot_solids1_trim150_scaffold_606

Search features with annotation key words

Displaying items 1-30 of 52 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_606_1
unknown

Not on your lists

248..811
DNA (564bp) protein (188aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_606_2
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

808..1590
DNA (783bp) protein (261aa)
Na+/Ca+ antiporter, CaCA family n=1 Tax=Mycobacterium gilvum (strain PYR-GCK) RepID=A4T1P2_MYCGI
Sodium:calcium antiporter {ECO:0000313|EMBL:EZQ13134.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
CaCA family Na(+)/Ca(+) antiporter; K07301 inner membrane protein
scnpilot_solids1_trim150_scaffold_606_3
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1817..4630
DNA (2814bp) protein (938aa)
ATPase, P-type (Transporting), HAD superfamily, subfamily IC n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A8A6_STAND rbh
P-type HAD superfamily ATPase rbh
ATPase, P-type (Transporting), HAD superfamily, subfamily IC {ECO:0000313|EMBL:ADH88579.1}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
scnpilot_solids1_trim150_scaffold_606_4
unknown

Not on your lists

comp(4480..4869)
DNA (390bp) protein (130aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_606_5
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5180..5737)
DNA (558bp) protein (186aa)
Lipoate-protein ligase A-like protein n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2J2H2_POLGS
lipoate-protein ligase A
Lipoate-protein ligase A-like protein {ECO:0000313|EMBL:ADZ70887.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
scnpilot_solids1_trim150_scaffold_606_6
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5727..5972)
DNA (246bp) protein (82aa)
Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex (E2) n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2J2H3_POLGS
dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex (E2)
Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex (E2) {ECO:0000313|EMBL:ADZ70888.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
scnpilot_solids1_trim150_scaffold_606_7
Rhodovulum sp. NI22, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5974..6549)
DNA (576bp) protein (192aa)
TPP-dependent acetoin dehydrogenase complex, E1 component subunit beta; K00162 pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
TPP-dependent acetoin dehydrogenase complex, E1 component, beta subunit n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2J2H4_POLGS
Pyruvate dehydrogenase {ECO:0000313|EMBL:KGB81020.1}; TaxID=1469613 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. NI22.;"
scnpilot_solids1_trim150_scaffold_606_8
unknown

Not on your lists

comp(6564..6836)
DNA (273bp) protein (91aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_606_9
Mesorhizobium sp. LSJC264A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6949..7185
DNA (237bp) protein (79aa)
Transposase n=1 Tax=Mesorhizobium sp. LSJC264A00 RepID=V7EP00_9RHIZ
Transposase {ECO:0000313|EMBL:ESX09807.1}; TaxID=1287321 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC264A00.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_606_10
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7390..7890)
DNA (501bp) protein (167aa)
Activator of Hsp90 ATPase 1 family protein n=1 Tax=Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5) RepID=B6JBT3_OLICO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI07636.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
scnpilot_solids1_trim150_scaffold_606_11
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8262..8966)
DNA (705bp) protein (235aa)
hypothetical protein n=1 Tax=Rhizobium loti RepID=UPI0003644A29
Uncharacterized protein {ECO:0000313|EMBL:EZQ15023.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
hypothetical protein; K07322 regulator of cell morphogenesis and NO signaling
scnpilot_solids1_trim150_scaffold_606_12
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9017..10717)
DNA (1701bp) protein (567aa)
Nitric-oxide reductase subunit B n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WTZ6_9GAMM
Nitric-oxide reductase {ECO:0000313|EMBL:EXL07935.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
nitric oxide reductase large subunit
scnpilot_solids1_trim150_scaffold_606_13
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10714..11682)
DNA (969bp) protein (323aa)
Cytochrome c2 n=1 Tax=Rhodanobacter denitrificans RepID=M4NG81_9GAMM
Cytochrome C {ECO:0000313|EMBL:EZQ15021.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
cytochrome c2
scnpilot_solids1_trim150_scaffold_606_14
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11679..11840)
DNA (162bp) protein (54aa)
Uncharacterized protein {ECO:0000313|EMBL:EZQ15020.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
scnpilot_solids1_trim150_scaffold_606_15
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12111..12560
DNA (450bp) protein (150aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI0003656A47
Rrf2 family transcriptional regulator {ECO:0000313|EMBL:EXL07938.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
BadM/Rrf2 family transcriptional regulator; K13771 Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor
scnpilot_solids1_trim150_scaffold_606_16
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12661..13713)
DNA (1053bp) protein (351aa)
Rhodocoxin reductase {ECO:0000313|EMBL:CDX37063.1}; EC=1.18.1.- {ECO:0000313|EMBL:CDX37063.1};; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
pyridine nucleotide-disulfide oxidoreductase; K00529 ferredoxin--NAD+ reductase [EC:1.18.1.3] rbh
hypothetical protein n=1 Tax=Methylopila sp. M107 RepID=UPI000364963D rbh
scnpilot_solids1_trim150_scaffold_606_17
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14444..14677)
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NRA7_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:EKS30979.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_606_18
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14674..15321)
DNA (648bp) protein (216aa)
Nifu protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JAM0_OLICO
nifu protein
Uncharacterized protein {ECO:0000313|EMBL:AEI05006.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
scnpilot_solids1_trim150_scaffold_606_19
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15368..15904)
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V3C9_9BRAD
SirA-like protein {ECO:0000313|EMBL:CEG07045.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_606_20
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15925..17547)
DNA (1623bp) protein (541aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NPB5_AFIFE rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS30976.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
hypothetical protein rbh
scnpilot_solids1_trim150_scaffold_606_21
unknown

Not on your lists

comp(17598..18086)
DNA (489bp) protein (163aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_606_22
Hoeflea sp. IMCC20628, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18200..18775
DNA (576bp) protein (192aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V3D5_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:AKH98806.1}; TaxID=1620421 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. IMCC20628.;"
scnpilot_solids1_trim150_scaffold_606_23
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18775..19041
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07M05_RHOP5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ07029.1}; TaxID=316055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisA53).;"
scnpilot_solids1_trim150_scaffold_606_24
Hoeflea sp. BRH_c9, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19289..19564
DNA (276bp) protein (92aa)
hypothetical protein n=1 Tax=Mesorhizobium sp. WSM4349 RepID=UPI000369BE8E
Uncharacterized protein {ECO:0000313|EMBL:KJS10184.1}; TaxID=1629712 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. BRH_c9.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_606_25
Methyloceanibacter caenitepidi, Methyloceanibacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19598..20779)
DNA (1182bp) protein (394aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI0003677056
NnrS protein {ECO:0000313|EMBL:BAQ16583.1}; TaxID=1384459 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methyloceanibacter.;" source="Methyloceanibacter caenitepidi.;"
NnrS family protein; K07234 uncharacterized protein involved in response to NO rbh
scnpilot_solids1_trim150_scaffold_606_26
Martelella endophytica, Martelella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20776..21471)
DNA (696bp) protein (232aa)
NnrUfamily protein n=1 Tax=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) RepID=B1M115_METRJ
NnrU family protein {ECO:0000313|EMBL:AJY45537.1}; TaxID=1486262 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Martelella.;" source="Martelella endophytica.;"
NnrU family protein
scnpilot_solids1_trim150_scaffold_606_27
Lutibaculum baratangense, Lutibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21624..22115
DNA (492bp) protein (164aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI000365E074
Nitrite-sensitive transcriptional repressor NsrR {ECO:0000313|EMBL:ESR23426.1}; TaxID=631454 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Lutibaculum.;" source="Lutibaculum baratangense AMV1.;"
hypothetical protein; K13771 Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor
scnpilot_solids1_trim150_scaffold_606_28
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22199..22594
DNA (396bp) protein (132aa)
ferredoxin n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI00036B2C42
Ferredoxin {ECO:0000313|EMBL:AHB47817.1}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; K05524 ferredoxin
scnpilot_solids1_trim150_scaffold_606_29
Corynebacterium glutamicum, Corynebacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22545..23960
DNA (1416bp) protein (472aa)
hypothetical protein n=1 Tax=Methylosinus sp. LW4 RepID=UPI00035CBC2F rbh
hypothetical protein, MMGE/PRPD-family, putative involved in propoinate catabolism rbh
MMGE/PRPD FAMILY PROTEIN {ECO:0000313|EMBL:CAF21200.1}; Uncharacterized protein involved in propionate catabolism {ECO:0000313|EMBL:BAB99931.1}; TaxID=196627 species="Bacteria; Actinobacteria; Corynebacteriales; Corynebacteriaceae; Corynebacterium.;" source="Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 /; LMG 3730 / NCIMB 10025).;"
scnpilot_solids1_trim150_scaffold_606_30
Segniliparus rotundus, Segniliparus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23988..24803
DNA (816bp) protein (272aa)
hypothetical protein n=1 Tax=Methylosinus sp. LW4 RepID=UPI000364E346 rbh
(2R)-phospho-3-sulfolactate synthase ComA
(2R)-phospho-3-sulfolactate synthase ComA {ECO:0000313|EMBL:ADG98867.1}; TaxID=640132 species="Bacteria; Actinobacteria; Corynebacteriales; Segniliparaceae; Segniliparus.;" source="Segniliparus rotundus (strain ATCC BAA-972 / CDC 1076 / CIP 108378 /; DSM 44985 / JCM 13578).;"
Displaying items 1-30 of 52 in total

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