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scnpilot_solids1_trim150_scaffold_1253

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_1253_1
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..123)
DNA (123bp) protein (41aa)
diguanylate cyclase n=1 Tax=Thiobacillus denitrificans RepID=UPI00036DF283
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
scnpilot_solids1_trim150_scaffold_1253_2
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(333..791)
DNA (459bp) protein (153aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036D3CA1
17 kDa surface antigen; K06077 outer membrane lipoprotein SlyB
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
scnpilot_solids1_trim150_scaffold_1253_3
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1046..2077
DNA (1032bp) protein (344aa)
mechanosensitive ion channel protein MscS n=1 Tax=Thiobacillus denitrificans RepID=UPI00037E2A21 rbh
small-conductance mechanosensitive channel protein; K16052 MscS family membrane protein YnaI rbh
Small-conductance mechanosensitive channel protein {ECO:0000313|EMBL:AAZ97415.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
scnpilot_solids1_trim150_scaffold_1253_4
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2391..2651
DNA (261bp) protein (87aa)
translation initiation factor IF-1 n=1 Tax=Thiobacillus denitrificans RepID=UPI000368996D
translation initiation factor IF-1; K02518 translation initiation factor IF-1
Translation initiation factor IF-1 2 {ECO:0000255|HAMAP-Rule:MF_00075}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
scnpilot_solids1_trim150_scaffold_1253_5
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2708..3205)
DNA (498bp) protein (166aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003635963 rbh
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
scnpilot_solids1_trim150_scaffold_1253_6
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3202..3675)
DNA (474bp) protein (158aa)
tRNA-adenosine deaminase (EC:3.5.4.-); K01485 cytosine deaminase [EC:3.5.4.1]
CRISPR-associated protein Csn1 n=1 Tax=Thiobacillus denitrificans RepID=UPI00037E76EF rbh
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
scnpilot_solids1_trim150_scaffold_1253_7
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3957..4274)
DNA (318bp) protein (106aa)
plasmid stabilization protein n=1 Tax=Methylohalobius crimeensis RepID=UPI0003B43810
plasmid stabilization system
Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
scnpilot_solids1_trim150_scaffold_1253_8
CG_Beta_01, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4256..4447)
DNA (192bp) protein (64aa)
Uncharacterized protein n=1 Tax=Halomonas sp. PBN3 RepID=U7NL84_9GAMM
hypothetical protein
Tax=CG_Beta_01
scnpilot_solids1_trim150_scaffold_1253_9
BJP_IG2158_Methylococcales_50_91, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4539..5522)
DNA (984bp) protein (328aa)
Integron integrase Phage integrase Phage integrase N-terminal SAM-like domain n=1 Tax=Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298) RepID=Q820I6_NITEU rbh
intINeu; integron integrase rbh
Tax=BJP_IG2158_Methylococcales_50_91
scnpilot_solids1_trim150_scaffold_1253_10
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5747..6139
DNA (393bp) protein (131aa)
Tax=CG_Rhodof_04
scnpilot_solids1_trim150_scaffold_1253_11
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6074..6628)
DNA (555bp) protein (185aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa CF614 RepID=U8ARV4_PSEAI
Uncharacterized protein {ECO:0000313|EMBL:CDH77878.1}; TaxID=1306165 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa MH27.;"
phage protein
scnpilot_solids1_trim150_scaffold_1253_12
Sideroxydans lithotrophicus, Sideroxydans, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6734..7300
DNA (567bp) protein (189aa)
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CSR4_SIDLE
alkyl hydroperoxide reductase/Thiol specific antioxidant/Mal allergen
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen {ECO:0000313|EMBL:ADE12000.1}; TaxID=580332 species="Bacteria; Proteobacteria; Betaproteobacteria; Gallionellales; Gallionellaceae; Sideroxydans.;" source="Sideroxydans lithotrophicus (strain ES-1).;"
scnpilot_solids1_trim150_scaffold_1253_13
Marinobacter hydrocarbonoclasticus, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7968..9008)
DNA (1041bp) protein (347aa)
Transposase IS116/IS110/IS902 family protein n=1 Tax=Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) RepID=A1TZB8_MARAV rbh
transposase IS116/IS110/IS902 family protein rbh
Transposase IS116/IS110/IS902 family protein {ECO:0000313|EMBL:ABM18087.1}; TaxID=351348 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source="Marinobacter hydrocarbonoclasticus (strain ATCC 700491 / DSM 11845 /; VT8).;"
scnpilot_solids1_trim150_scaffold_1253_14
Cupriavidus basilensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9125..9736
DNA (612bp) protein (204aa)
Amino acid transporter LysE n=1 Tax=Pseudomonas stutzeri DSM 10701 RepID=I7ACJ7_PSEST rbh
Cupriavidus basilensis strain 4G11 chromosome secondary, complete sequence {ECO:0000313|EMBL:AJG24386.1}; TaxID=68895 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus basilensis.;"
amino acid transporter LysE rbh
scnpilot_solids1_trim150_scaffold_1253_15
Alishewanella jeotgali, Alishewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9846..10475
DNA (630bp) protein (210aa)
cytochrome B561; K12262 cytochrome b561 id=12493161 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
Cytochrome B561 {ECO:0000313|EMBL:EHR39712.1}; TaxID=1129374 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Alishewanella.;" source="Alishewanella jeotgali KCTC 22429.;"
cytochrome B561; K12262 cytochrome b561
scnpilot_solids1_trim150_scaffold_1253_16

Not on your lists

10619..10939
DNA (321bp) protein (107aa)
multidrug transporter n=1 Tax=Thiobacillus denitrificans RepID=UPI0003600367
Uncharacterized protein {ECO:0000313|EMBL:KKO09806.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
small multidrug resistance protein; K11741 quaternary ammonium compound-resistance protein SugE
scnpilot_solids1_trim150_scaffold_1253_17
Pseudomonas taeanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11092..11472
DNA (381bp) protein (127aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036D4D58
DoxX family protein {ECO:0000313|EMBL:KFX70324.1}; TaxID=1395571 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas taeanensis MS-3.;"
DoxX family protein; K15977 putative oxidoreductase
scnpilot_solids1_trim150_scaffold_1253_18
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11486..11839
DNA (354bp) protein (118aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003771AD8
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
scnpilot_solids1_trim150_scaffold_1253_19
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12388..12957
DNA (570bp) protein (190aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00035FBB42 rbh
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
scnpilot_solids1_trim150_scaffold_1253_20
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12983..13381
DNA (399bp) protein (133aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037C30F9
glyoxalase/bleomycin resistance protein/dioxygenase; K07032
Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
scnpilot_solids1_trim150_scaffold_1253_21
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13431..13775
DNA (345bp) protein (115aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003800893
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
scnpilot_solids1_trim150_scaffold_1253_22
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13840..14574)
DNA (735bp) protein (245aa)
toluene ABC transporter ATP-binding protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003788AD8 rbh
ATP-binding ABC transporter protein; K02065 putative ABC transport system ATP-binding protein
Tax=GWE1_Thiobacillus_62_9_curated
Displaying 22 items

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