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scnpilot_solids1_trim150_scaffold_205_104

Organism: SCNPILOT_SOLID_1_TRIM150_Rhizobiales_63_14

near complete RP 51 / 55 MC: 4 BSCG 51 / 51 MC: 3 ASCG 11 / 38
Location: comp(113496..114023)

Top 3 Functional Annotations

Value Algorithm Source
UPI0003CE3FBC related cluster n=1 Tax=unknown RepID=UPI0003CE3FBC similarity UNIREF
DB: UNIREF100
  • Identity: 65.9
  • Coverage: 179.0
  • Bit_score: 237
  • Evalue 1.10e-59
RNA polymerase sigma factor {ECO:0000313|EMBL:ESY75434.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.9
  • Coverage: 178.0
  • Bit_score: 236
  • Evalue 3.40e-59
RNA polymerase sigma factor, sigma-70 family similarity KEGG
DB: KEGG
  • Identity: 65.4
  • Coverage: 179.0
  • Bit_score: 231
  • Evalue 1.90e-58

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Taxonomy

Mesorhizobium sp. LNHC252B00 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 528
ATGAGCGGCAGGCTCGCTGGCGAACGCTTCCGGGAGGTGGTCCTCCCGCACCTTCCGGATGCGCTTTCATTGGCACGCTGGCTCACCGGCAATGTCCACGATGCCGAAGACGTGGTGCAGGAGGCCTGCCTCAAGGCCCATGCCGGCATCGGTACTTACGCCGGCGGCAACGCGCGCGCCTGGCTTCTGACTATCGTGCGCCACGCCGCCTATACCTGGCTGGCGAAGAACCGCCCGAGCAACCTCGTTGCCGTCGGCGGCCTCTCCGATCTCGACGAATTCGCGCTCCAACCGGATGCGGCGAGCACGCCCGAAGCCGCGTTTCTCGAAAAGGCGGACACGGACGCACTCCAGGCGGCGATCACCGCATTGCCGCTCATCTTCCGCGAGGTGGTGGTGCTGCGCGACGTAAACGGTCTCGGCTATCGGGAGATCGCGCAGATGCTCGATATCCCGATCGGCACAGTGATGTCGCGCCTGGCGCGGGGGCGCGGCACGCTGATTCTGGAGCTGGGGAAGGGGCAATGA
PROTEIN sequence
Length: 176
MSGRLAGERFREVVLPHLPDALSLARWLTGNVHDAEDVVQEACLKAHAGIGTYAGGNARAWLLTIVRHAAYTWLAKNRPSNLVAVGGLSDLDEFALQPDAASTPEAAFLEKADTDALQAAITALPLIFREVVVLRDVNGLGYREIAQMLDIPIGTVMSRLARGRGTLILELGKGQ*