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scnpilot_solids1_trim150_scaffold_400_12

Organism: SCNPILOT_SOLID_1_TRIM150_Rhizobiales_63_14

near complete RP 51 / 55 MC: 4 BSCG 51 / 51 MC: 3 ASCG 11 / 38
Location: comp(11589..12314)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, GntR family n=1 Tax=Agrobacterium tumefaciens (strain C58 / ATCC 33970) RepID=A9CFC4_AGRT5 similarity UNIREF
DB: UNIREF100
  • Identity: 56.2
  • Coverage: 226.0
  • Bit_score: 257
  • Evalue 1.80e-65
GntR family transcriptional regulator {ECO:0000313|EMBL:KGM35504.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.3
  • Coverage: 221.0
  • Bit_score: 267
  • Evalue 1.40e-68
GntR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 56.2
  • Coverage: 226.0
  • Bit_score: 257
  • Evalue 5.70e-66

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Taxonomy

Inquilinus limosus → Inquilinus → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 726
ATGTCGCCGACGATCGAGAAGTCAGACGGACGCGCGCGCGGGCTCGAGTCGCTCATTCCGAAGATCGATCGCAGGCAGCCCGTCCGCGAACAAGTCTACGAGACGTTGCGCTCAGCGATCATCAGCACCCTGCTACAGCCGGGAGCGTCAATCAGCGAAAACGCGCTCGTTCGGCGGTTCGGCGTATCCCGGACTCCCATCCGCGCGGCGATCCAGCGGCTTTCGGAGGAAGGCTTGATCGACGTCTTCCCGCAGCAAGGCAGCTTCATCGCTCCGATCAGGCTGTCCGAGATCGCCGACAGTCATTTCGTCCGCCGCGCGCTCGAGGTCGCTATCCTCGCGGAGGTTTCGAAGGTCTGGTCGCCGGACAAGAGCGCAATCGCGCGCGCCTGTATCGACCGTTTGAGCGCGATGATCGCCGCTGGCGACGACGGGGGCTTCCACGCCGAAGACGAGCTGTTCCACGAATTGATGGCTCAGTTCGCAAAGCGGGAGGGCGTATGGGCGACGATCTTATCCGCCAAGACGCGTCTTACCCGGCTTCATCGGCTGTGGGGTCGGCCGGAGCGCCTGCCGATGGTTGTCGCAGAGCATCTGGCGATCGTCGATGCCCTCGACGCGGGAGATACCCAGCGGGCGCAAGAAGCGTTGATCGACCATCTCGATAAGGTCTTCACGATGCTGAACAACCTGCCGGAAGAAATCCGGGTTCACGTCCATGACTAG
PROTEIN sequence
Length: 242
MSPTIEKSDGRARGLESLIPKIDRRQPVREQVYETLRSAIISTLLQPGASISENALVRRFGVSRTPIRAAIQRLSEEGLIDVFPQQGSFIAPIRLSEIADSHFVRRALEVAILAEVSKVWSPDKSAIARACIDRLSAMIAAGDDGGFHAEDELFHELMAQFAKREGVWATILSAKTRLTRLHRLWGRPERLPMVVAEHLAIVDALDAGDTQRAQEALIDHLDKVFTMLNNLPEEIRVHVHD*