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scnpilot_solids1_trim150_scaffold_30_30

Organism: SCNPILOT_SOLID_1_TRIM150_Rhizobiales_63_14

near complete RP 51 / 55 MC: 4 BSCG 51 / 51 MC: 3 ASCG 11 / 38
Location: 43925..45016

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Aureimonas ureilytica RepID=UPI000366F85F similarity UNIREF
DB: UNIREF100
  • Identity: 45.3
  • Coverage: 369.0
  • Bit_score: 296
  • Evalue 4.10e-77
Type VI secretion protein, VC_A0111 family {ECO:0000313|EMBL:EYR83996.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.3
  • Coverage: 364.0
  • Bit_score: 393
  • Evalue 2.60e-106
hypothetical protein; K11895 type VI secretion system protein ImpH similarity KEGG
DB: KEGG
  • Identity: 37.7
  • Coverage: 355.0
  • Bit_score: 253
  • Evalue 7.30e-65

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1092
ATGGCCCGCGCGCGGAGGCGACCGCATACTTCTTTGAAGTCGGATGTTTTCGACCGCCCGCAGGCCTACGAACTCTTCCAGGCCATGCGGATCGTCGAGTTGATCGCGGCCGAAGAGAACGCGACTACCAACCTGCCGGTCCCCGAGACGGCCGGACGAGGCGTCGATTTGAAGCGCGCCACGATGCGGATACGCTCCGGCGTCCCGCTCGGCTTCGCGGCGATCGAGGTGGCCTCCGTTCGTCGGCCGAAGGGAAGCAGCCAGATCGAATTGACACAGACCGTCTTCGGCCTGACCGGACCGTCCGGCGCGCTTCCGCATGCCTTCAGCGAGCTTGTCCATCTTAGCGTGCGCGAACGAAATCCGGGCCTGCGCGATTTCCTCGATCTCTTCAACAACCGTCTGAGCGGGCTTTACTTCGAGGCCTGGGCCAAGCATCAGCTGGCCGCGGAATTCGAGCGCGGCGCCCGCCTGGAGCTGCCGCGCCCGATAGACGCCGCGCTGAGAGCCGTGGTCGGCTTCGGCCTGCCATCCATGCTGGACCGCACCGCTGCCGACGACAACACGCTCGTGCATTATGGCGGCCTGCTTTCACGCAACGCCCGATCTGCACAGGCCGTCGAACAATTGCTGGGCGGCGCCACCGGCCTTCCCATCCGTGTCGAGCAGTTCCACGCGCGCTGGCTGCCGATCGCCAAAGACGACCGCACTCTTCTGCCGGCTCCCGGCAGGCCGCAAGGCTCGTTCTGCCGGCTTGGGGACGACATGGTCATCGGCGAACGCATCTACGATATCCAGTCGACCGTGCGGCTGATCGTCGGGCCGGTCGGATATTCCGATTTCCGCGCGCTGCTGCCGGACGGGACAAGCTCGCGCGGGTTCGGCGATCTCGCCGCCGTCGCACTTGGACCGGAGATGTGCTTCCGGCTTTCGATTGAACTCAAGCCGGACGAGCTTCCGTCACTGCGTCTCGAAAGCCGGGACCATCCTGAAACCGGAAGCCGGCTGGGGTGGAATACCTGGCTTTACATGGACAAGCCGCGCCAGGCACCGGCACGCGTCGACATAGAGCCGCCCGCGCATCTGCGCTGA
PROTEIN sequence
Length: 364
MARARRRPHTSLKSDVFDRPQAYELFQAMRIVELIAAEENATTNLPVPETAGRGVDLKRATMRIRSGVPLGFAAIEVASVRRPKGSSQIELTQTVFGLTGPSGALPHAFSELVHLSVRERNPGLRDFLDLFNNRLSGLYFEAWAKHQLAAEFERGARLELPRPIDAALRAVVGFGLPSMLDRTAADDNTLVHYGGLLSRNARSAQAVEQLLGGATGLPIRVEQFHARWLPIAKDDRTLLPAPGRPQGSFCRLGDDMVIGERIYDIQSTVRLIVGPVGYSDFRALLPDGTSSRGFGDLAAVALGPEMCFRLSIELKPDELPSLRLESRDHPETGSRLGWNTWLYMDKPRQAPARVDIEPPAHLR*