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scnpilot_solids1_trim150_scaffold_887_9

Organism: SCNPILOT_SOLID_1_TRIM150_Rhizobiales_63_14

near complete RP 51 / 55 MC: 4 BSCG 51 / 51 MC: 3 ASCG 11 / 38
Location: 7982..9007

Top 3 Functional Annotations

Value Algorithm Source
UPI0003CED436 related cluster n=1 Tax=unknown RepID=UPI0003CED436 similarity UNIREF
DB: UNIREF100
  • Identity: 83.3
  • Coverage: 341.0
  • Bit_score: 564
  • Evalue 9.80e-158
Type VI secretion protein {ECO:0000313|EMBL:EZQ14594.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.2
  • Coverage: 341.0
  • Bit_score: 642
  • Evalue 3.10e-181
type II secretion system protein E; K03196 type IV secretion system protein VirB11 similarity KEGG
DB: KEGG
  • Identity: 53.5
  • Coverage: 342.0
  • Bit_score: 344
  • Evalue 5.00e-92

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Taxonomy

Pseudomonas bauzanensis → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1026
ATGAACGTCGTCCAGCCCGTTCCCAATCCTTGGGCACGCGCGCCCGTACTGCGTGCCGAACTCGAACCGATCTGGTCTTATCTTGAAGAGGATTCCGTTTCCGAAATCGCCATCAACCGGCCCGGCGAGATTTTCATTGAACGCCTTGGCGCAAAGGAGATGGAGCACGTCGTCAAGCGCGAGTTGACCCGCAACTGGATTCGCTCCGTTTCCACCGGCGTCGCTTCCGCGAGCAACCAGGTGGTCAACGAAGTGACGCCGGTGCTCTCGGCCGCTCTTCCGTCAGGTGAGCGTTTCCAGTGCGTCTTGCCGCCCGCGGCGCCGGACGGCGGCATAATCTCGATCCGCAAGCAGGTCATCATGGACATGACCCTGGACGATTATGCGCGGCGCGGCGCTTTCGAGCGTACGGCATTGGGAAGCGGCTTGGCCCTCTCGGCCGAAGAAAGAAAGCTCGTCGAGATGCTGCACGACACCTCGTCGCTCGAATTTCTGCAATTCGCCGTCCGCAATCGGATCTCCGTGGTCGTGTCGGGCGGCACCTCCACCGGCAAGACGACATTCCTCAATGCTCTCCTGAAGGTCGTTCCGGACCATGAGCGCATCATCACGATCGAGGACACGCGGGAACTGCGGCCGCCGATGCCCAACAATGTCTGCTTGCTCACCTCCAAGGGTGACCAGGGCCTTGCAAAGGTCACACCGCAACAGCTCCTTGAAGCCTCGCTGCGCATGCGGCCGGACCGCCTCCTGCTGGGCGAGTTGCGCGGCTCGGAAGCGTTCTCGTTCCTGCAGGCGATCAATACCGGCCACCCCGGATCGCTGACAACGGTGCATGCGAATTCCGCACGCTCGGCCTACGAGCGGCTCGCCCTCATGGTCATGCAGGGCAATGTCGGGCTCACGCGCGCCGAGATCCTCGACTATCTGCGCGAAGTGATCCCGGTCGTCGTGCAGATGGTTCGGTCGGAAGGTGGCCACCGCGCCATCAGCGAAATCAAATTCACCAAATCGGAGACGATCTGA
PROTEIN sequence
Length: 342
MNVVQPVPNPWARAPVLRAELEPIWSYLEEDSVSEIAINRPGEIFIERLGAKEMEHVVKRELTRNWIRSVSTGVASASNQVVNEVTPVLSAALPSGERFQCVLPPAAPDGGIISIRKQVIMDMTLDDYARRGAFERTALGSGLALSAEERKLVEMLHDTSSLEFLQFAVRNRISVVVSGGTSTGKTTFLNALLKVVPDHERIITIEDTRELRPPMPNNVCLLTSKGDQGLAKVTPQQLLEASLRMRPDRLLLGELRGSEAFSFLQAINTGHPGSLTTVHANSARSAYERLALMVMQGNVGLTRAEILDYLREVIPVVVQMVRSEGGHRAISEIKFTKSETI*