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scnpilot_solids1_trim150_scaffold_887

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_887_1
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..1821
DNA (1821bp) protein (607aa)
UPI0003CF4798 related cluster n=1 Tax=unknown RepID=UPI0003CF4798
Type VI secretion protein {ECO:0000313|EMBL:EXL04872.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
avhB4; type IV secretion protein AvhB4; K03199 type IV secretion system protein VirB4
scnpilot_solids1_trim150_scaffold_887_2
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1805..2959
DNA (1155bp) protein (385aa)
UPI0003CE64A9 related cluster n=1 Tax=unknown RepID=UPI0003CE64A9
Uncharacterized protein {ECO:0000313|EMBL:EZQ14633.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
Soluble lytic murein transglycosylase-like protein
scnpilot_solids1_trim150_scaffold_887_3
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2969..3703
DNA (735bp) protein (245aa)
UPI0003CF61F7 related cluster n=1 Tax=unknown RepID=UPI0003CF61F7
Conjugal transfer protein {ECO:0000313|EMBL:EZQ14590.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
type IV secretion system family protein
scnpilot_solids1_trim150_scaffold_887_4
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3710..3913
DNA (204bp) protein (68aa)
Uncharacterized protein {ECO:0000313|EMBL:EZQ14634.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
scnpilot_solids1_trim150_scaffold_887_5
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3910..4950
DNA (1041bp) protein (347aa)
UPI0003CEB309 related cluster n=1 Tax=unknown RepID=UPI0003CEB309
Uncharacterized protein {ECO:0000313|EMBL:EZQ14635.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
conjugal transfer protein; K03201 type IV secretion system protein VirB6
scnpilot_solids1_trim150_scaffold_887_6
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5024..5743
DNA (720bp) protein (240aa)
VirB8 n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FJA4_9RHIZ
Type VI secretion protein {ECO:0000313|EMBL:EZQ14591.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
VirB8; K03203 type IV secretion system protein VirB8
scnpilot_solids1_trim150_scaffold_887_7
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5740..6546
DNA (807bp) protein (269aa)
UPI0003CE1D32 related cluster n=1 Tax=unknown RepID=UPI0003CE1D32
Conjugal transfer protein {ECO:0000313|EMBL:EXL04875.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
virB9; type IV secretion protein VirB9; K03204 type IV secretion system protein VirB9
scnpilot_solids1_trim150_scaffold_887_8
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6549..7985
DNA (1437bp) protein (479aa)
UPI0003CF3579 related cluster n=1 Tax=unknown RepID=UPI0003CF3579
Conjugal transfer protein TrbI {ECO:0000313|EMBL:EZQ14593.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
conjugation TrbI-like protein; K03195 type IV secretion system protein VirB10
scnpilot_solids1_trim150_scaffold_887_9
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7982..9007
DNA (1026bp) protein (342aa)
UPI0003CED436 related cluster n=1 Tax=unknown RepID=UPI0003CED436
Type VI secretion protein {ECO:0000313|EMBL:EZQ14594.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
type II secretion system protein E; K03196 type IV secretion system protein VirB11
scnpilot_solids1_trim150_scaffold_887_10
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9024..11174
DNA (2151bp) protein (717aa)
UPI0003CE343C related cluster n=1 Tax=unknown RepID=UPI0003CE343C rbh
Uncharacterized protein {ECO:0000313|EMBL:EZQ14636.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
TRAG family protein; K03205 type IV secretion system protein VirD4
scnpilot_solids1_trim150_scaffold_887_11
Xanthomonas fuscans, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11310..11555)
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Xanthomonas axonopodis pv. malvacearum str. GSPB1386 RepID=K8G529_9XANT
Uncharacterized protein {ECO:0000313|EMBL:EFF44847.1}; TaxID=427081 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_887_12
Xanthomonas citri, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11768..12058
DNA (291bp) protein (97aa)
CopG family transcriptional regulator n=2 Tax=Xanthomonas axonopodis RepID=UPI000300341D
Uncharacterized protein {ECO:0000313|EMBL:CEH59363.1}; TaxID=434928 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas citri pv. citri.;"
DNA-binding protein
scnpilot_solids1_trim150_scaffold_887_13
Xanthomonas citri, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12055..12546
DNA (492bp) protein (164aa)
N-acetyltransferase GCN5 n=1 Tax=Xanthomonas axonopodis RepID=UPI0002DA7A51
Uncharacterized protein {ECO:0000313|EMBL:CEH59357.1}; TaxID=434928 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas citri pv. citri.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_887_14
Cupriavidus sp. HMR-1, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12759..13211
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Cupriavidus sp. HMR-1 RepID=L2E9P0_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EKZ95956.1}; TaxID=1249621 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. HMR-1.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_887_15
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13374..13760)
DNA (387bp) protein (129aa)
GATS-like protein 1 n=1 Tax=Agrobacterium sp. 224MFTsu3.1 RepID=UPI00037B135F
Strain MEJ076 contig_45, whole genome shotgun sequence {ECO:0000313|EMBL:KIP98078.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;"
hypothetical protein; K09707 hypothetical protein
scnpilot_solids1_trim150_scaffold_887_16
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13797..14288)
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2M8L5_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EKF17330.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_887_17
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14346..16604)
DNA (2259bp) protein (753aa)
UPI0003CFDB70 related cluster n=1 Tax=unknown RepID=UPI0003CFDB70
Uncharacterized protein {ECO:0000313|EMBL:EZQ14637.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_887_18
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16601..16921)
DNA (321bp) protein (107aa)
UPI0003D06969 related cluster n=1 Tax=unknown RepID=UPI0003D06969
Uncharacterized protein {ECO:0000313|EMBL:EXL04959.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
scnpilot_solids1_trim150_scaffold_887_19
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17464..18144
DNA (681bp) protein (227aa)
Putative ParA-like protein n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FJH4_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EZQ14639.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
parA; chromosome partitioning protein; K03496 chromosome partitioning protein
scnpilot_solids1_trim150_scaffold_887_20
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18141..18557
DNA (417bp) protein (139aa)
UPI0003CF37C6 related cluster n=1 Tax=unknown RepID=UPI0003CF37C6
Uncharacterized protein {ECO:0000313|EMBL:EZQ14640.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
scnpilot_solids1_trim150_scaffold_887_21
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18676..19236)
DNA (561bp) protein (187aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0003064D3F
Uncharacterized protein {ECO:0000313|EMBL:EXL04880.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_887_22
unknown

Not on your lists

comp(19296..19472)
DNA (177bp) protein (59aa)

This feature has no annotations

Displaying 22 items

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