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scnpilot_solids1_trim150_scaffold_988_6

Organism: SCNPILOT_SOLID_1_TRIM150_Rhizobiales_63_14

near complete RP 51 / 55 MC: 4 BSCG 51 / 51 MC: 3 ASCG 11 / 38
Location: 4254..5447

Top 3 Functional Annotations

Value Algorithm Source
Efflux transporter, RND family, MFP subunit n=2 Tax=Oligotropha carboxidovorans RepID=B6JDQ8_OLICO similarity UNIREF
DB: UNIREF100
  • Identity: 69.8
  • Coverage: 397.0
  • Bit_score: 562
  • Evalue 4.40e-157
Hemolysin secretion protein D {ECO:0000313|EMBL:EZQ14988.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.6
  • Coverage: 397.0
  • Bit_score: 625
  • Evalue 5.90e-176
RND family efflux transporter MFP subunit similarity KEGG
DB: KEGG
  • Identity: 69.8
  • Coverage: 397.0
  • Bit_score: 562
  • Evalue 1.40e-157

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Taxonomy

Pseudomonas bauzanensis → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1194
GTGAAATTTCCCTCAATACAACGCCGTACCCTGATGCTTCTCGCGGTCGCAATTTCAATAGCTGCCATGTTTGGTTACGTGGTTCTCAGATCGGGGCCACTGGCGCCGGTCGCTATCATGACTGCCACTGTCGAAAGCCGTTCTATAGCCCCGGCGCTCTTCGGCATCGGTACGGTCGAAGCACGCTACTCCTATAAGATCGGTCCTACCAATGCCGGGCGCATCGGCAAAATATATGTCGATGTCGGTGACAAGGTGCATGCGGGTCAGGTTCTGGCAGAAATGGATCCGGTCGACATTGATGAGCGGATCGTGGCGCTTGATGCCGCGATCGGTCGCGCGGAAGCCTCTGTAAAGATCGCAATAGCGCAGGTCGATGATGCGCTCGCCCGCAAGGGTTACGCTGATGCGCAGGCTGCGCGTTATGAACAACTATGGAAGAGCCGCTCGATAAGCGAGGCGGCCCTCGACGCCAAGCGGCAGGACGGCCAGGTGGCGGGCGCCGTCCTTGCGGCGGCACGCTCAGGTCTTGTTGCCGCACAGCAGGACCTGGAACGTAATCGCGCCGATCGTGACGGGGTGATCAAGCAGAAGGAAAATCTGGTTCTGTGCGCGCCGGTCGATGGCGTGGTCTCGGCGCGCAATGCTGAGCCGGGAACAACGATGGTTGCCGGCCAGGCTATTATCGAGATGATCGACCCCAAGAGCCTGTGGATCAATGCCCGGTTCGACCAGATTGCAGCCGGTGGTCTGCGCAAAGGACTTTCGACAAAAATCGTGCTGCGGTCTCATGACGGAGCGGACATTCCAGGAAAAGTGTCGCGCGTGGAAGTCCTCGCCGACTCGGTAACCGAAGAAAATCTGGGCAAGGTCGCGTTCGACTCGCTTCCCGAGCCTTTGCCTCCAATTGGAGAGCTGGCCGAAGTGACGATCGCTCTGCCCGAACTTCCCGCTTCTCCGGTGGTGCCCAATGCTTCCATCCAGACTATCAGCGGCAAGGCAGGTGTGTGGAAAGTCGAAGATGGGAAAATCCATTTCGTTTCCGTCCGTGTTGGAGCTTCCGACCTCGATGGAAGCATCCAGGTGCTGGAGGGCTTGCAGGTCGGCGACCAGGTTGTCGCTCACAGCGCCTCGCGGCTGACCGGCACGAGCCGCGTTCACATCACCGACAATCCGGCGGAGCTTCTCAAATGA
PROTEIN sequence
Length: 398
VKFPSIQRRTLMLLAVAISIAAMFGYVVLRSGPLAPVAIMTATVESRSIAPALFGIGTVEARYSYKIGPTNAGRIGKIYVDVGDKVHAGQVLAEMDPVDIDERIVALDAAIGRAEASVKIAIAQVDDALARKGYADAQAARYEQLWKSRSISEAALDAKRQDGQVAGAVLAAARSGLVAAQQDLERNRADRDGVIKQKENLVLCAPVDGVVSARNAEPGTTMVAGQAIIEMIDPKSLWINARFDQIAAGGLRKGLSTKIVLRSHDGADIPGKVSRVEVLADSVTEENLGKVAFDSLPEPLPPIGELAEVTIALPELPASPVVPNASIQTISGKAGVWKVEDGKIHFVSVRVGASDLDGSIQVLEGLQVGDQVVAHSASRLTGTSRVHITDNPAELLK*