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scnpilot_solids1_trim150_scaffold_988

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_988_1
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..1533
DNA (1533bp) protein (511aa)
Heavy metal translocating P-type ATPase n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1B781_PARDP
ATPase P {ECO:0000313|EMBL:EXL07878.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
heavy metal translocating P-type ATPase
scnpilot_solids1_trim150_scaffold_988_2
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1580..2428
DNA (849bp) protein (283aa)
Uncharacterized protein n=1 Tax=Nitratireductor indicus C115 RepID=K2NKD3_9RHIZ rbh
Universal stress protein UspA {ECO:0000313|EMBL:EXL07879.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_988_3
unknown

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comp(2822..3001)
DNA (180bp) protein (60aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_988_4
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3266..3874
DNA (609bp) protein (203aa)
Transcriptional regulator n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0B4D9_9RHIZ
TetR family transcriptional regulator {ECO:0000313|EMBL:EZQ14972.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
transcriptional regulator
scnpilot_solids1_trim150_scaffold_988_5
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3871..4257
DNA (387bp) protein (129aa)
Transcriptional regulator n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0B974_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EZQ15034.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
transcriptional regulator
scnpilot_solids1_trim150_scaffold_988_6
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4254..5447
DNA (1194bp) protein (398aa)
Efflux transporter, RND family, MFP subunit n=2 Tax=Oligotropha carboxidovorans RepID=B6JDQ8_OLICO
Hemolysin secretion protein D {ECO:0000313|EMBL:EZQ14988.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
RND family efflux transporter MFP subunit
scnpilot_solids1_trim150_scaffold_988_7
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5444..6646
DNA (1203bp) protein (401aa)
Putative permease n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D1A8_9RHIZ
ABC transporter permease {ECO:0000313|EMBL:EXL07838.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
putative permease; K02004 putative ABC transport system permease protein
scnpilot_solids1_trim150_scaffold_988_8
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6648..7358
DNA (711bp) protein (237aa)
Lipoprotein-releasing system ATP-binding protein LolD n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EXV3_9RHIZ rbh
ABC transporter {ECO:0000313|EMBL:EXL07837.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
putative macrolide export ATP-binding protein/permease MacB; K02003 putative ABC transport system ATP-binding protein rbh
scnpilot_solids1_trim150_scaffold_988_9
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7406..7804
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0B4D5_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EZQ14992.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_988_10
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8920..9552
DNA (633bp) protein (211aa)
hypothetical protein n=1 Tax=Rhizobium leguminosarum RepID=UPI000361631F
Uncharacterized protein {ECO:0000313|EMBL:EXL04028.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_988_11
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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9549..9800
DNA (252bp) protein (84aa)
Hypothetical conserved protein n=1 Tax=Rhizobium etli (strain CFN 42 / ATCC 51251) RepID=Q2K2P9_RHIEC
hypothetical protein
Hypothetical conserved protein {ECO:0000313|EMBL:ABC93025.1}; TaxID=347834 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli (strain CFN 42 / ATCC 51251).;"
scnpilot_solids1_trim150_scaffold_988_12
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10041..11024)
DNA (984bp) protein (328aa)
Putative ATPase (AAA+ superfamily) n=2 Tax=Rhizobium leguminosarum bv. trifolii WSM597 RepID=J0H777_RHILT rbh
hypothetical protein; K07133 rbh
Putative ATPase (AAA+ superfamily) {ECO:0000313|EMBL:EJB05998.1}; TaxID=754764 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM597.;"
scnpilot_solids1_trim150_scaffold_988_13
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11024..11344)
DNA (321bp) protein (107aa)
Putative ATPase (AAA+ superfamily) n=2 Tax=Rhizobium leguminosarum bv. trifolii WSM597 RepID=J0H777_RHILT
hypothetical protein; K07133
Uncharacterized protein {ECO:0000313|EMBL:ACI58295.1}; TaxID=395492 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii (strain WSM2304).;"
scnpilot_solids1_trim150_scaffold_988_14
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11446..11700
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Rhizobium fredii (strain HH103) RepID=G9AC33_RHIFH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCE98612.1}; TaxID=1117943 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium fredii (strain HH103) (Sinorhizobium fredii).;"
scnpilot_solids1_trim150_scaffold_988_15
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11906..12817
DNA (912bp) protein (304aa)
ABC transporter n=1 Tax=Rhizobium giardinii RepID=UPI0003699874 rbh
Putative solute-binding component of ABC transporter {ECO:0000313|EMBL:AHK45642.1}; TaxID=1416753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens OV14.;"
ABC transporter substrate-binding protein; K05845 osmoprotectant transport system substrate-binding protein rbh
scnpilot_solids1_trim150_scaffold_988_16
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12831..14063
DNA (1233bp) protein (411aa)
Putative transporter subunit: permease component of ABC superfamily n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5F3L4_9RHIZ rbh
Putative transporter subunit: permease component of ABC superfamily {ECO:0000313|EMBL:CCV06441.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
ABC-type proline/glycine betaine transport system, permease component rbh
scnpilot_solids1_trim150_scaffold_988_17
Ochrobactrum sp. EGD-AQ16, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14060..14998
DNA (939bp) protein (313aa)
ATP-binding protein n=1 Tax=Ochrobactrum sp. EGD-AQ16 RepID=U1X288_9RHIZ rbh
ATP-binding protein {ECO:0000313|EMBL:ERI14919.1}; TaxID=1390361 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum sp. EGD-AQ16.;"
ABC transporter-like protein; K05847 osmoprotectant transport system ATP-binding protein rbh
scnpilot_solids1_trim150_scaffold_988_18
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14998..15753
DNA (756bp) protein (252aa)
ABC transporter, permease protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q983A4_RHILO rbh
ABC transporter permease; K05846 osmoprotectant transport system permease protein rbh
ABC transporter, permease protein {ECO:0000313|EMBL:BAB54302.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
scnpilot_solids1_trim150_scaffold_988_19
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16049..17851)
DNA (1803bp) protein (601aa)
ATP-dependent metalloprotease FtsH (EC:3.6.4.3); K03798 cell division protease FtsH [EC:3.4.24.-] rbh
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=652103 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain DX-1).;"
ATP-dependent zinc metalloprotease FtsH n=1 Tax=Rhodopseudomonas palustris (strain DX-1) RepID=E6VNS2_RHOPX rbh
Displaying 19 items

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