ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

scnpilot_solids1_trim150_scaffold_991_7

Organism: SCNPILOT_SOLID_1_TRIM150_Rhizobiales_63_14

near complete RP 51 / 55 MC: 4 BSCG 51 / 51 MC: 3 ASCG 11 / 38
Location: comp(5620..7095)

Top 3 Functional Annotations

Value Algorithm Source
proton-translocating NADH-quinone oxidoreductase subunit M; K00342 NADH-quinone oxidoreductase subunit M [EC:1.6.5.3] similarity KEGG
DB: KEGG
  • Identity: 79.2
  • Coverage: 491.0
  • Bit_score: 773
  • Evalue 3.70e-221
  • rbh
Proton-translocating NADH-quinone oxidoreductase, chain M n=1 Tax=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) RepID=B1ZBB1_METPB similarity UNIREF
DB: UNIREF100
  • Identity: 79.2
  • Coverage: 491.0
  • Bit_score: 773
  • Evalue 1.20e-220
  • rbh
Oxidoreductase {ECO:0000313|EMBL:KIZ44801.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.9
  • Coverage: 491.0
  • Bit_score: 816
  • Evalue 2.20e-233

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodopseudomonas palustris → Rhodopseudomonas → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1476
ATGCTGAATCTCGTCATCTTCCTGCCGCTGCTCACCGGCTTCGTCGTGTTAGCCTTGCCGCGCCGCCGCCCGGATCTCGTGCGGCGGATCGCTTTCGCCGGCGCCGCGCTGACGCTGATCGCCGCCATCATCCTGTGGTTCGGCTTCGATCCGAACGGCGGCAATTTGCAATGGCGCATGACTACGTCGTGGATCCCGGCGATCGGCGCGAGCTACGACGTCGCCGTCTCGGGCGTTTCGCTGGCGCTGATCCTGCTCACCGGGGTGCTGCTCACCGTCGTTATGCTCTATGTACTCGGCGAGCACGACCGGGCGCATGCGCATGCCTTTCTTTTTCTCCTGCTTGGCACCGGTCTCATCGGCCTGTTCGCGGCGCAAGACCTGCTGCTGTTCTATTTGTTCTTCGAAATCGGCCTGGTGCCGATGTATTTTATCGTCGGGATCTGGGGCGGGGAGCGGCGGAGCTACGCGGCGCTGAAATTCTTCCTCTATACCCGCGCCGGCAGCCTCGCCATGCTGCTCGGCTTTCTCGCGCTTTATCTCGCCATGGAACCGCATACCTTCTCGCTCCCGGCGATCGTGGCGGCGAAGCCGCTGGCGGGAGCGCCGCTTGCTTCGGCGCTCGTCTTCTTCGCCCTCCTGATCGGCTTCGGTGTCAAGCTGCCCCTCGTACCCCTGCACAACTGGCTGCCCGACGCCCATGTCGAGGCGCCGACCGAAGGCAGCGTCGTCCTTGCCGGCCTGCAGCTCAAGATGGGCGGCTACGGCCTGATCGCCATCCTGCTGCCTGTCCTTCCGGAGACGGTGGCGCGGTTCGGCTGGCTCCTGGTTGTCATCGCTCTGGTATCTCTGCTCTACGGCGCGCTCGCCGCGCTCGCCCAGAGCGACATGAAGCGGCTGGTCGCCTACACCTCGATCAACCATATGGCCTATGTGCTGCTCGGCGTCGCCGTCGCCGCGATGACGGGCAATGCCGCGACGCGCCAACTCGCCCTCAACGGCGCGACGGTGCAAATGGTCAGCCACGGCCTGCTGACAGGCGGCATGTTCCTTATGGTCGGCATGTTGCAACACCGCGCCGGCACGCGCGAGATCGACCGCTTCGGCGGCCTGATCGGGTCCATGCCGGGCTTCAGCTTCCTGTTCGGGCTGCTTGCCTTCGGCTCGCTCGGCCTGCCCGGCCTGTCCGGCTTCATCGCCGAGTTCCAGGTGATCGGCGCCGCCCTGCAGCTTTCCGTCTGGGTCGCTGCGATCACCGTACTCGGCCTGATCGTCGCCACCGCCGTCTATCTGCGACTAACGGCCGGCGTGCTGATGGGAAGCCGGAGCCCGGATACCAAGGCGCTGCCGCCGCTCGCTTCGCGCGAGGCCTGGTCGGCCGGCATCCTCGCCGTGCTTTCCGTCCTGATCGGCGTCCTGCCGGCGGTCCTCATCGCCGCCATCGACGGCGCAACCCGCATCCTGGCGCAATTCTGA
PROTEIN sequence
Length: 492
MLNLVIFLPLLTGFVVLALPRRRPDLVRRIAFAGAALTLIAAIILWFGFDPNGGNLQWRMTTSWIPAIGASYDVAVSGVSLALILLTGVLLTVVMLYVLGEHDRAHAHAFLFLLLGTGLIGLFAAQDLLLFYLFFEIGLVPMYFIVGIWGGERRSYAALKFFLYTRAGSLAMLLGFLALYLAMEPHTFSLPAIVAAKPLAGAPLASALVFFALLIGFGVKLPLVPLHNWLPDAHVEAPTEGSVVLAGLQLKMGGYGLIAILLPVLPETVARFGWLLVVIALVSLLYGALAALAQSDMKRLVAYTSINHMAYVLLGVAVAAMTGNAATRQLALNGATVQMVSHGLLTGGMFLMVGMLQHRAGTREIDRFGGLIGSMPGFSFLFGLLAFGSLGLPGLSGFIAEFQVIGAALQLSVWVAAITVLGLIVATAVYLRLTAGVLMGSRSPDTKALPPLASREAWSAGILAVLSVLIGVLPAVLIAAIDGATRILAQF*