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scnpilot_solids1_trim150_scaffold_991

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_991_1
unknown

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comp(1..81)
DNA (81bp) protein (27aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_991_2
Paracoccus halophilus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(266..448)
DNA (183bp) protein (61aa)
Glutaredoxin {ECO:0000313|EMBL:KGJ02324.1}; TaxID=376733 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus halophilus.;"
scnpilot_solids1_trim150_scaffold_991_3
Tistrella mobilis, Tistrella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(507..3047)
DNA (2541bp) protein (847aa)
actP; copper-transporting ATPase (EC:3.6.3.4); K01533 Cu2+-exporting ATPase [EC:3.6.3.4]
PREDICTED: copper-transporting ATPase RAN1-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C197CA rbh
Heavy metal translocating P-type ATPase {ECO:0000313|EMBL:AFK54076.1}; TaxID=1110502 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Tistrella.;" source="Tistrella mobilis (strain KA081020-065).;"
scnpilot_solids1_trim150_scaffold_991_4
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3233..3436
DNA (204bp) protein (68aa)
hypothetical protein n=1 Tax=Martelella mediterranea RepID=UPI000378910C
Heavy metal transport/detoxification protein {ECO:0000313|EMBL:EKF40273.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
copZ; copper chaperone, heavy metal ion binding protein; K07213 copper chaperone
scnpilot_solids1_trim150_scaffold_991_5
Rhizobium nepotum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3588..4088)
DNA (501bp) protein (167aa)
hypothetical protein n=1 Tax=Aureimonas ureilytica RepID=UPI00035DD736
Membrane protein containing {ECO:0000313|EMBL:KJF65300.1}; TaxID=1368418 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium nepotum 39/7.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_991_6
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4169..5620)
DNA (1452bp) protein (484aa)
NADH-quinone oxidoreductase subunit N {ECO:0000256|HAMAP-Rule:MF_00445}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_00445};; NADH dehydrogenase I subunit N {ECO:0000256|HAMAP-Rule:MF_00445}; NDH-1 subunit N {ECO:0000256|HAMAP-Rule:MF_00445}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
NADH dehydrogenase (quinone); K00343 NADH-quinone oxidoreductase subunit N [EC:1.6.5.3] rbh
NADH-quinone oxidoreductase subunit N n=1 Tax=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) RepID=B1ZBB2_METPB rbh
scnpilot_solids1_trim150_scaffold_991_7
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5620..7095)
DNA (1476bp) protein (492aa)
proton-translocating NADH-quinone oxidoreductase subunit M; K00342 NADH-quinone oxidoreductase subunit M [EC:1.6.5.3] rbh
Proton-translocating NADH-quinone oxidoreductase, chain M n=1 Tax=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) RepID=B1ZBB1_METPB rbh
Oxidoreductase {ECO:0000313|EMBL:KIZ44801.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
scnpilot_solids1_trim150_scaffold_991_8
Methylobacterium populi, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7105..9030)
DNA (1926bp) protein (642aa)
proton-translocating NADH-quinone oxidoreductase subunit L; K00341 NADH-quinone oxidoreductase subunit L [EC:1.6.5.3] rbh
Proton-translocating NADH-quinone oxidoreductase, chain L {ECO:0000313|EMBL:ACB80706.1}; EC=1.6.99.5 {ECO:0000313|EMBL:ACB80706.1};; Flags: Precursor;; TaxID=441620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001).;"
Proton-translocating NADH-quinone oxidoreductase, chain L n=1 Tax=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) RepID=B1ZBB0_METPB rbh
scnpilot_solids1_trim150_scaffold_991_9
Methylobacterium populi, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9027..9338)
DNA (312bp) protein (104aa)
NADH-ubiquinone oxidoreductase chain 4L; K05576 NAD(P)H-quinone oxidoreductase subunit 4L [EC:1.6.5.3]
NADH-quinone oxidoreductase subunit K {ECO:0000256|HAMAP-Rule:MF_01456}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01456};; NADH dehydrogenase I subunit K {ECO:0000256|HAMAP-Rule:MF_01456}; NDH-1 subunit K {ECO:0000256|HAMAP-Rule:MF_01456}; Flags: Precursor;; TaxID=441620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001).;"
NADH-quinone oxidoreductase subunit K n=1 Tax=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) RepID=B1ZBA9_METPB
scnpilot_solids1_trim150_scaffold_991_10
Methylobacterium sp. GXF4, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9335..10228)
DNA (894bp) protein (298aa)
NADH-ubiquinone/plastoquinone oxidoreductase chain 6 n=1 Tax=Methylobacterium sp. GXF4 RepID=I9CJN3_9RHIZ rbh
NADH-ubiquinone/plastoquinone oxidoreductase chain 6 {ECO:0000313|EMBL:EIZ84287.1}; TaxID=1096546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. GXF4.;"
NADH-ubiquinone/plastoquinone oxidoreductase chain 6 rbh
scnpilot_solids1_trim150_scaffold_991_11
Methylobacterium populi, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10225..11118)
DNA (894bp) protein (298aa)
NADH dehydrogenase (quinone); K00337 NADH-quinone oxidoreductase subunit H [EC:1.6.5.3] rbh
NADH dehydrogenase (Quinone) {ECO:0000313|EMBL:ACB80703.1}; EC=1.6.99.5 {ECO:0000313|EMBL:ACB80703.1};; Flags: Precursor;; TaxID=441620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001).;"
NADH dehydrogenase (Quinone) n=1 Tax=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) RepID=B1ZBA7_METPB rbh
scnpilot_solids1_trim150_scaffold_991_12
Methylobacterium aquaticum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11115..11450)
DNA (336bp) protein (112aa)
NADH-quinone oxidoreductase subunit {ECO:0000256|RuleBase:RU003639}; EC=1.6.5.11 {ECO:0000256|RuleBase:RU003639};; TaxID=270351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium aquaticum.;"
NADH-ubiquinone/plastoquinone oxidoreductase chain 3; K00330 NADH-quinone oxidoreductase subunit A [EC:1.6.5.3]
NADH-quinone oxidoreductase subunit n=1 Tax=Methylobacterium sp. GXF4 RepID=I9LHK0_9RHIZ
scnpilot_solids1_trim150_scaffold_991_13
unknown

Not on your lists

comp(11530..11745)
DNA (216bp) protein (72aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_991_14
unknown

Not on your lists

comp(11899..12015)
DNA (117bp) protein (39aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_991_15
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12142..12723)
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FEK5_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CDX19914.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_991_16
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12720..13514)
DNA (795bp) protein (265aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5F6P6_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:CCV11951.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_991_17
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13579..14268)
DNA (690bp) protein (230aa)
Putative oxidoreductase protein n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5F672_9RHIZ rbh
Putative oxidoreductase protein {ECO:0000313|EMBL:CCV11950.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
Protein SCO1 homolog, mitochondrial; K07152
scnpilot_solids1_trim150_scaffold_991_18
unknown

Not on your lists

comp(14339..14638)
DNA (300bp) protein (100aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_991_19
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14674..14961)
DNA (288bp) protein (96aa)
hypothetical protein n=1 Tax=Thalassospira lucentensis RepID=UPI0003B686F4
Uncharacterized protein {ECO:0000313|EMBL:CCV08364.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_991_20
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14976..15500)
DNA (525bp) protein (175aa)
Putative thioredoxin protein n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EWN5_9RHIZ
Putative thioredoxin protein {ECO:0000313|EMBL:CCV08365.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
thioredoxin protein
scnpilot_solids1_trim150_scaffold_991_21
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15497..16105)
DNA (609bp) protein (203aa)
Thiol:disulfide interchange protein cycY n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5F905_9RHIZ rbh
Thiol:disulfide interchange protein cycY {ECO:0000313|EMBL:CCV08366.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
cycY; cytochrome c-type biogenesis protein CycY (periplasmic thioredoxin)
scnpilot_solids1_trim150_scaffold_991_22
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16224..16664)
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5F6P2_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CCV11946.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_991_23
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16702..17892)
DNA (1191bp) protein (397aa)
Copper oxidase n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FEK0_9RHIZ
Copper oxidase {ECO:0000313|EMBL:ESX69990.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
multicopper oxidase, type 3
Displaying 23 items

View Taxonomy