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scnpilot_solids1_trim150_scaffold_776

Search features with annotation key words

Displaying items 1-30 of 67 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_776_1
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..178
DNA (177bp) protein (59aa)
Integrase catalytic subunit (Fragment) n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W7M0_9GAMM
Integrase catalytic subunit {ECO:0000313|EMBL:EIL95461.1}; Flags: Fragment;; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
transposase, IS30 family
scnpilot_solids1_trim150_scaffold_776_2
Candidatus Accumulibacter sp. SK-12, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(274..1803)
DNA (1530bp) protein (510aa)
Methionyl-tRNA formyltransferase {ECO:0000313|EMBL:EXI68196.1}; EC=2.1.2.9 {ECO:0000313|EMBL:EXI68196.1};; TaxID=1454001 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-12.;"
Polysaccharide deacetylase n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RT01_ACCPU rbh
polysaccharide deacetylase rbh
scnpilot_solids1_trim150_scaffold_776_3
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2442..3131
DNA (690bp) protein (230aa)
Phosphatidylserine decarboxylase proenzyme {ECO:0000256|SAAS:SAAS00154492}; EC=4.1.1.65 {ECO:0000256|SAAS:SAAS00093350};; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Phosphatidylserine decarboxylase-like protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WQS8_9GAMM rbh
phosphatidylserine decarboxylase rbh
scnpilot_solids1_trim150_scaffold_776_4
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3128..3325
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WQS7_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG90132.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_776_5
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3353..6160)
DNA (2808bp) protein (936aa)
Putative PEP-CTERM system TPR-repeat lipoprotein n=1 Tax=Rhodanobacter denitrificans RepID=M4NRE6_9GAMM rbh
Putative PEP-CTERM system TPR-repeat lipoprotein {ECO:0000313|EMBL:AGG90131.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
putative PEP-CTERM system TPR-repeat lipoprotein rbh
scnpilot_solids1_trim150_scaffold_776_6
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6198..7559)
DNA (1362bp) protein (454aa)
PEP-CTERM-box response regulator transcription factor n=1 Tax=Rhodanobacter denitrificans RepID=M4NGQ7_9GAMM rbh
PEP-CTERM-box response regulator transcription factor rbh
PEP-CTERM-box response regulator transcription factor {ECO:0000313|EMBL:AGG90130.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_776_7
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7556..9637)
DNA (2082bp) protein (694aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Putative PEP-CTERM system histidine kinase n=1 Tax=Rhodanobacter denitrificans RepID=M4NGV6_9GAMM rbh
putative PEP-CTERM system histidine kinase rbh
scnpilot_solids1_trim150_scaffold_776_8
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9705..10874)
DNA (1170bp) protein (390aa)
UDP-N-acetylglucosamine 2-epimerase n=1 Tax=Rhodanobacter denitrificans RepID=I4WQS3_9GAMM rbh
UDP-N-acetylglucosamine 2-epimerase rbh
UDP-N-acetylglucosamine 2-epimerase {ECO:0000313|EMBL:AGG90128.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_776_9
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11101..11985)
DNA (885bp) protein (295aa)
UBA/THIF-type NAD/FAD binding protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WQS2_9GAMM rbh
dinucleotide-utilizing enzyme possibly involved in molybdopterin or thiamin biosynthesis rbh
Dinucleotide-utilizing enzyme possibly involved in molybdopterin or thiamin biosynthesis {ECO:0000313|EMBL:AGG90127.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_776_10
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12260..13075)
DNA (816bp) protein (272aa)
PEP-CTERM putative exosortase interaction domain-containing protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NRE0_9GAMM rbh
PEP-CTERM putative exosortase interaction domain-containing protein rbh
PEP-CTERM putative exosortase interaction domain-containing protein {ECO:0000313|EMBL:AGG90126.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_776_11
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13702..14757)
DNA (1056bp) protein (352aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NGQ2_9GAMM rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AGG90125.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_776_12
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15318..16121
DNA (804bp) protein (268aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WRW2_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIM02204.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein rbh
scnpilot_solids1_trim150_scaffold_776_13
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16324..17031)
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NKB9_9GAMM rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AGG90123.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_776_14
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17421..18161)
DNA (741bp) protein (247aa)
PEP-CTERM putative exosortase interaction domain-containing protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NJ52_9GAMM rbh
PEP-CTERM putative exosortase interaction domain-containing protein rbh
PEP-CTERM putative exosortase interaction domain-containing protein {ECO:0000313|EMBL:AGG90122.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_776_15
unknown

Not on your lists

18495..18692
DNA (198bp) protein (66aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_776_16
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18710..19210
DNA (501bp) protein (167aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003691D06
ATPase {ECO:0000313|EMBL:KGI77891.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
activator of Hsp90 ATPase 1 family protein
scnpilot_solids1_trim150_scaffold_776_trna_1
unknown

Not on your lists

comp(19424..19496)
DNA (73bp)
transferRNA Phe
scnpilot_solids1_trim150_scaffold_776_17
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19578..19856)
DNA (279bp) protein (93aa)
Probable Fe(2+)-trafficking protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NKA4_9GAMM
Fe-S cluster protector protein
Probable Fe(2+)-trafficking protein {ECO:0000256|HAMAP-Rule:MF_00686, ECO:0000256|SAAS:SAAS00073862}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_776_18
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19969..21009)
DNA (1041bp) protein (347aa)
A/G-specific DNA-adenine glycosylase (EC:3.2.2.-) rbh
A/G-specific DNA-adenine glycosylase {ECO:0000313|EMBL:AGG90107.1}; EC=3.2.2.- {ECO:0000313|EMBL:AGG90107.1};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
A/G-specific DNA-adenine glycosylase n=1 Tax=Rhodanobacter denitrificans RepID=M4NJ39_9GAMM rbh
scnpilot_solids1_trim150_scaffold_776_19
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21006..22076)
DNA (1071bp) protein (357aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WQR4_9GAMM rbh
uncharacterized protein involved in outer membrane biogenesis rbh
Uncharacterized protein involved in outer membrane biogenesis {ECO:0000313|EMBL:AGG90106.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_776_20
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(22100..22285)
DNA (186bp) protein (62aa)
Signal recognition particle receptor FtsY n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WRW8_9GAMM
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
signal recognition particle-docking protein FtsY
scnpilot_solids1_trim150_scaffold_776_21
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22282..23139)
DNA (858bp) protein (286aa)
Signal recognition particle receptor FtsY n=1 Tax=Rhodanobacter denitrificans RepID=I4WQR3_9GAMM
signal recognition particle-docking protein FtsY
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_776_22
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23214..23795
DNA (582bp) protein (194aa)
Ribosomal RNA small subunit methyltransferase D {ECO:0000256|PIRNR:PIRNR004553}; EC=2.1.1.171 {ECO:0000256|PIRNR:PIRNR004553};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
RsmD family RNA methyltransferase n=1 Tax=Rhodanobacter denitrificans RepID=I4WQR2_9GAMM rbh
16S rRNA m(2)G-966 methyltransferase rbh
scnpilot_solids1_trim150_scaffold_776_23
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23822..24373
DNA (552bp) protein (184aa)
pantetheine-phosphate adenylyltransferase (EC:2.7.7.3) rbh
Phosphopantetheine adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109024}; EC=2.7.7.3 {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109037};; Dephospho-CoA pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00151}; Pantetheine-phosphate adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Phosphopantetheine adenylyltransferase n=1 Tax=Rhodanobacter denitrificans RepID=I4WQR1_9GAMM rbh
scnpilot_solids1_trim150_scaffold_776_24
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24366..24869
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WQR0_9GAMM rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AGG90102.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_776_25
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25015..25275
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WQQ9_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG90101.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_776_26
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25272..26996
DNA (1725bp) protein (575aa)
Gamma-glutamyltransferase 1 {ECO:0000313|EMBL:AGG90100.1}; EC=2.3.2.2 {ECO:0000313|EMBL:AGG90100.1};; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
gamma-glutamyltransferase 1 (EC:2.3.2.2) rbh
Gamma-glutamyltranspeptidase n=1 Tax=Rhodanobacter denitrificans RepID=I4WQQ8_9GAMM rbh
scnpilot_solids1_trim150_scaffold_776_27
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27007..27162
DNA (156bp) protein (52aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NGT0_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG90099.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_776_28
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27164..28036
DNA (873bp) protein (291aa)
Beta-lactamase n=1 Tax=Rhodanobacter denitrificans RepID=I4WQQ7_9GAMM rbh
Zn-dependent hydrolase, glyoxylase rbh
Zn-dependent hydrolase, glyoxylase {ECO:0000313|EMBL:AGG90098.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_776_29
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28036..29073
DNA (1038bp) protein (346aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WQQ6_9GAMM rbh
Protein of unknown function (DUF1625) rbh
Uncharacterized protein {ECO:0000313|EMBL:AGG90097.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Displaying items 1-30 of 67 in total

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