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scnpilot_solids1_trim150_scaffold_858

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_858_1
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..1221)
DNA (1221bp) protein (407aa)
Penicillin-binding protein 1C n=1 Tax=Rhodanobacter denitrificans RepID=M4NA97_9GAMM
penicillin-binding protein 1C
Penicillin-binding protein 1C {ECO:0000313|EMBL:AGG87360.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_858_2
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1424..2101)
DNA (678bp) protein (226aa)
Large extracellular alpha-helical protein n=1 Tax=Rhodanobacter denitrificans RepID=M4ND44_9GAMM
large extracellular alpha-helical protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids1_trim150_scaffold_858_3
unknown

Not on your lists

2533..2730
DNA (198bp) protein (66aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_858_4
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3127..3678)
DNA (552bp) protein (184aa)
Large extracellular alpha-helical protein n=1 Tax=Rhodanobacter denitrificans RepID=M4ND44_9GAMM
large extracellular alpha-helical protein
Large extracellular alpha-helical protein {ECO:0000313|EMBL:AGG87358.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_858_5
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3678..6200)
DNA (2523bp) protein (841aa)
Large extracellular alpha-helical protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WWZ8_9GAMM
Large extracellular alpha-helical protein {ECO:0000313|EMBL:AGG87358.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
large extracellular alpha-helical protein
scnpilot_solids1_trim150_scaffold_858_6
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6302..7180)
DNA (879bp) protein (293aa)
Lysophospholipase n=1 Tax=Rhodanobacter denitrificans RepID=I4WWZ7_9GAMM rbh
lysophospholipase rbh
Lysophospholipase {ECO:0000313|EMBL:AGG87357.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_858_7
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7237..9243)
DNA (2007bp) protein (669aa)
Trypsin-like serine protease with C-terminal PDZ domain n=1 Tax=Rhodanobacter denitrificans RepID=I4WWZ6_9GAMM rbh
Trypsin-like serine protease with C-terminal PDZ domain {ECO:0000313|EMBL:AGG87356.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
trypsin-like serine protease with C-terminal PDZ domain rbh
scnpilot_solids1_trim150_scaffold_858_8
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9418..11664)
DNA (2247bp) protein (749aa)
TonB-dependent receptor n=1 Tax=Rhodanobacter denitrificans RepID=I4WWZ5_9GAMM rbh
Outer membrane receptor protein {ECO:0000313|EMBL:AGG87355.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
outer membrane receptor protein rbh
scnpilot_solids1_trim150_scaffold_858_9
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11775..14003)
DNA (2229bp) protein (743aa)
Beta-glucosidase-like glycosyl hydrolase n=1 Tax=Rhodanobacter denitrificans RepID=M4NAA3_9GAMM rbh
Beta-glucosidase-like glycosyl hydrolase {ECO:0000313|EMBL:AGG87354.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
beta-glucosidase-like glycosyl hydrolase rbh
scnpilot_solids1_trim150_scaffold_858_10
Burkholderia sp. BT03, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14149..18687
DNA (4539bp) protein (1513aa)
DEAD/DEAH box helicase; K03724 ATP-dependent helicase Lhr and Lhr-like helicase [EC:3.6.4.-] rbh
Lhr-like helicase n=1 Tax=Burkholderia sp. BT03 RepID=J2HM60_9BURK rbh
DEAD/H associated domain protein {ECO:0000313|EMBL:EUC19040.1}; TaxID=1144309 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. BT03.;"
scnpilot_solids1_trim150_scaffold_858_11
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18814..20415)
DNA (1602bp) protein (534aa)
Carboxypeptidase C (Cathepsin A) n=1 Tax=Rhodanobacter denitrificans RepID=I4WUY4_9GAMM rbh
Carboxypeptidase C (Cathepsin A) {ECO:0000313|EMBL:AGG87343.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
carboxypeptidase C (cathepsin A) rbh
scnpilot_solids1_trim150_scaffold_858_12
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20712..22025
DNA (1314bp) protein (438aa)
Sugar-binding glycoside hydrolase family 2 n=1 Tax=Rhodanobacter denitrificans RepID=I4WQH2_9GAMM rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AGG87609.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_858_13
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22161..23018)
DNA (858bp) protein (286aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WET8_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL97979.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
EamA-like transporter family rbh
scnpilot_solids1_trim150_scaffold_858_14
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23070..23936)
DNA (867bp) protein (289aa)
Metallo-beta-lactamase family protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WUY2_9GAMM rbh
Zn-dependent hydrolase, glyoxylase rbh
Zn-dependent hydrolase, glyoxylase {ECO:0000313|EMBL:AGG87341.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_858_15
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23978..24328)
DNA (351bp) protein (117aa)
ArsR family transcriptional regulator n=1 Tax=Rhodanobacter denitrificans RepID=I4WUY1_9GAMM
putative transcriptional regulator
Putative transcriptional regulator {ECO:0000313|EMBL:AGG87340.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_858_16
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24537..25823
DNA (1287bp) protein (429aa)
NADH dehydrogenase, FAD-containing subunit (EC:1.8.5.-) rbh
NADH dehydrogenase, FAD-containing subunit {ECO:0000313|EMBL:AGG87339.1}; EC=1.8.5.- {ECO:0000313|EMBL:AGG87339.1};; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
NADH dehydrogenase, FAD-containing subunit n=1 Tax=Rhodanobacter denitrificans RepID=I4WUY0_9GAMM rbh
scnpilot_solids1_trim150_scaffold_858_17
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25887..26093
DNA (207bp) protein (69aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WUX9_9GAMM
Protein of unknown function (DUF2892)
Uncharacterized protein {ECO:0000313|EMBL:AGG87338.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_858_18
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26120..26509
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WEU3_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL97984.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_858_19
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26512..27615
DNA (1104bp) protein (368aa)
RND family efflux transporter MFP subunit n=2 Tax=Rhodanobacter denitrificans RepID=I4WUX7_9GAMM rbh
RND family efflux transporter, MFP subunit rbh
RND family efflux transporter, MFP subunit {ECO:0000313|EMBL:AGG87336.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_858_20
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27608..30850
DNA (3243bp) protein (1081aa)
Acriflavin resistance protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WUX6_9GAMM rbh
Cation/multidrug efflux pump {ECO:0000313|EMBL:AGG87335.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
cation/multidrug efflux pump rbh
scnpilot_solids1_trim150_scaffold_858_21
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30881..31744)
DNA (864bp) protein (288aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WUX5_9GAMM rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AGG87334.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_858_22
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31980..32234
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WEU7_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL97988.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_858_23
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32310..32768
DNA (459bp) protein (153aa)
Transcriptional regulator n=1 Tax=Rhodanobacter denitrificans RepID=I4WUX3_9GAMM
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AGG87332.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_858_24
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32792..34231
DNA (1440bp) protein (480aa)
NodT family efflux transporter outer membrane lipoprotein n=1 Tax=Rhodanobacter denitrificans RepID=I4WUX2_9GAMM rbh
efflux transporter, outer membrane factor lipoprotein, NodT family rbh
Efflux transporter, outer membrane factor lipoprotein, NodT family {ECO:0000313|EMBL:AGG87331.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_858_25
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34533..35384
DNA (852bp) protein (284aa)
Multidrug resistance efflux pump n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WEV0_9GAMM
Multidrug resistance efflux pump {ECO:0000313|EMBL:EIL97991.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
multidrug resistance efflux pump
scnpilot_solids1_trim150_scaffold_858_26
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35493..37019
DNA (1527bp) protein (509aa)
Drug resistance transporter, EmrB/QacA subfamily n=1 Tax=Rhodanobacter denitrificans RepID=M4NA90_9GAMM rbh
drug resistance transporter, EmrB/QacA subfamily rbh
Drug resistance transporter, EmrB/QacA subfamily {ECO:0000313|EMBL:AGG87329.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_858_27
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37079..37600)
DNA (522bp) protein (174aa)
Lipid A 3-O-deacylase (PagL) n=1 Tax=Rhodanobacter denitrificans RepID=I4WUW9_9GAMM rbh
Lipid A 3-O-deacylase (PagL) rbh
Lipid A 3-O-deacylase (PagL) {ECO:0000313|EMBL:AGG87328.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_858_28
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37769..39241)
DNA (1473bp) protein (491aa)
Putative Zn-dependent peptidase n=1 Tax=Rhodanobacter denitrificans RepID=M4NC29_9GAMM rbh
putative Zn-dependent peptidase rbh
Putative Zn-dependent peptidase {ECO:0000313|EMBL:AGG87327.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_858_29
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(39238..40617)
DNA (1380bp) protein (460aa)
Putative Zn-dependent peptidase n=1 Tax=Rhodanobacter denitrificans RepID=M4NHM1_9GAMM rbh
putative Zn-dependent peptidase rbh
Putative Zn-dependent peptidase {ECO:0000313|EMBL:AGG87326.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_858_30
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

40909..44223
DNA (3315bp) protein (1105aa)
Autotransporter subtilase family protease n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VNT2_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KGI78053.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
autotransporter-associated beta strand repeat protein
Displaying 30 items

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