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scnpilot_solids1_trim150_scaffold_944

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Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_944_1
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..760
DNA (759bp) protein (253aa)
Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains n=1 Tax=Rhodanobacter denitrificans RepID=M4NEB9_9GAMM
response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains
Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains {ECO:0000313|EMBL:AGG87858.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_944_2
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(771..2027)
DNA (1257bp) protein (419aa)
Antimicrobial peptide ABC transporter permease n=1 Tax=Rhodanobacter denitrificans RepID=I4WZJ7_9GAMM rbh
ABC-type antimicrobial peptide transport system, permease component
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids1_trim150_scaffold_944_3
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2036..3400)
DNA (1365bp) protein (455aa)
Antimicrobial peptide ABC transporter permease n=1 Tax=Rhodanobacter denitrificans RepID=I4WZJ8_9GAMM rbh
ABC-type antimicrobial peptide transport system, permease component rbh
ABC-type antimicrobial peptide transport system, permease component {ECO:0000313|EMBL:AGG87856.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_944_4
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3397..4935)
DNA (1539bp) protein (513aa)
Signal transduction histidine kinase n=1 Tax=Rhodanobacter denitrificans RepID=I4WZJ9_9GAMM rbh
signal transduction histidine kinase rbh
Signal transduction histidine kinase {ECO:0000313|EMBL:AGG87855.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_944_5
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5039..5485)
DNA (447bp) protein (149aa)
Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain n=1 Tax=Rhodanobacter denitrificans RepID=I4WZK0_9GAMM
response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain {ECO:0000313|EMBL:AGG87854.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_944_6
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5495..7276)
DNA (1782bp) protein (594aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
PAS domain S-box n=2 Tax=Rhodanobacter denitrificans RepID=M4NEB5_9GAMM rbh
PAS domain S-box rbh
scnpilot_solids1_trim150_scaffold_944_7
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7382..9685)
DNA (2304bp) protein (768aa)
Alpha-1,2-mannosidase family protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WZK2_9GAMM rbh
alpha-1,2-mannosidase, putative rbh
Alpha-1,2-mannosidase, putative {ECO:0000313|EMBL:AGG87852.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_944_8
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9851..11191
DNA (1341bp) protein (447aa)
L-fucose:H+ symporter permease n=1 Tax=Rhodanobacter denitrificans RepID=I4WZK3_9GAMM rbh
L-fucose:H+ symporter permease rbh
L-fucose:H+ symporter permease {ECO:0000313|EMBL:AGG87851.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_944_9
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11193..12173
DNA (981bp) protein (327aa)
Sugar kinase n=1 Tax=Rhodanobacter denitrificans RepID=I4WZK4_9GAMM rbh
sugar kinase, ribokinase rbh
Sugar kinase, ribokinase {ECO:0000313|EMBL:AGG87850.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_944_10
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12170..13396
DNA (1227bp) protein (409aa)
N-acyl-D-glucosamine 2-epimerase n=1 Tax=Rhodanobacter denitrificans RepID=I4WZK5_9GAMM rbh
N-acyl-D-glucosamine 2-epimerase rbh
N-acyl-D-glucosamine 2-epimerase {ECO:0000313|EMBL:AGG87849.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_944_11
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13422..15392
DNA (1971bp) protein (657aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WAR1_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL96552.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
aminopeptidase N rbh
scnpilot_solids1_trim150_scaffold_944_12
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15417..17576)
DNA (2160bp) protein (720aa)
Outer membrane receptor protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WPU5_9GAMM
Outer membrane receptor protein {ECO:0000313|EMBL:EIM01487.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
outer membrane receptor protein; K02014 iron complex outermembrane recepter protein
scnpilot_solids1_trim150_scaffold_944_13
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17826..18263
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WPU6_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIM01488.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_944_14
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18256..18678
DNA (423bp) protein (141aa)
L-sorbosone dehydrogenase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WPU7_9GAMM
L-sorbosone dehydrogenase {ECO:0000313|EMBL:EIM01489.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
L-sorbosone dehydrogenase
scnpilot_solids1_trim150_scaffold_944_15
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18669..19523
DNA (855bp) protein (285aa)
L-sorbosone dehydrogenase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WPU7_9GAMM
L-sorbosone dehydrogenase {ECO:0000313|EMBL:EIM01489.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
L-sorbosone dehydrogenase
scnpilot_solids1_trim150_scaffold_944_16
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19695..21461)
DNA (1767bp) protein (589aa)
ABC transporter ATP-binding protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WZK8_9GAMM rbh
ABC-type multidrug transport system, ATPase and permease component {ECO:0000313|EMBL:AGG87846.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
ABC-type multidrug transport system, ATPase and permease component rbh
scnpilot_solids1_trim150_scaffold_944_17
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21696..22307)
DNA (612bp) protein (204aa)
Peroxiredoxin n=2 Tax=Rhodanobacter denitrificans RepID=M4NB53_9GAMM rbh
Peroxiredoxin rbh
Peroxiredoxin {ECO:0000313|EMBL:AGG87845.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_944_18
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22447..23532)
DNA (1086bp) protein (362aa)
Serine kinase of the HPr protein, regulates carbohydrate metabolism n=3 Tax=Rhodanobacter denitrificans RepID=M4NB84_9GAMM rbh
serine kinase of the HPr protein, regulates carbohydrate metabolism rbh
Serine kinase of the HPr protein, regulates carbohydrate metabolism {ECO:0000313|EMBL:AGG87844.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_944_19
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23729..25231
DNA (1503bp) protein (501aa)
Fe-S oxidoreductase n=1 Tax=Rhodanobacter denitrificans RepID=M4NEA6_9GAMM rbh
Fe-S oxidoreductase rbh
Fe-S oxidoreductase {ECO:0000313|EMBL:AGG87843.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_944_20
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25206..26426
DNA (1221bp) protein (407aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WCQ7_9GAMM rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AGG87842.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_944_21
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26436..27395
DNA (960bp) protein (320aa)
Type 11 methyltransferase n=1 Tax=Rhodanobacter denitrificans RepID=I4WCQ8_9GAMM rbh
methylase involved in ubiquinone/menaquinone biosynthesis rbh
Methylase involved in ubiquinone/menaquinone biosynthesis {ECO:0000313|EMBL:AGG87841.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_944_22
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27371..28501)
DNA (1131bp) protein (377aa)
Glycosyltransferase n=1 Tax=Rhodanobacter denitrificans RepID=M4NB50_9GAMM rbh
glycosyltransferase rbh
Glycosyltransferase {ECO:0000313|EMBL:AGG87840.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_944_23
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28498..29625)
DNA (1128bp) protein (376aa)
Glycosyltransferase n=1 Tax=Rhodanobacter denitrificans RepID=I4WT51_9GAMM rbh
glycosyltransferase rbh
Glycosyltransferase {ECO:0000313|EMBL:AGG87839.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_944_24
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29639..31156)
DNA (1518bp) protein (506aa)
Radical SAM protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WT52_9GAMM rbh
Fe-S oxidoreductase rbh
Fe-S oxidoreductase {ECO:0000313|EMBL:AGG87838.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_944_25
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31182..31466)
DNA (285bp) protein (95aa)
Biotin synthesis protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WT53_9GAMM
methylase involved in ubiquinone/menaquinone biosynthesis
Methylase involved in ubiquinone/menaquinone biosynthesis {ECO:0000313|EMBL:AGG87837.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_944_26
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31463..31795)
DNA (333bp) protein (111aa)
Biotin synthesis protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WT53_9GAMM
methylase involved in ubiquinone/menaquinone biosynthesis
Methylase involved in ubiquinone/menaquinone biosynthesis {ECO:0000313|EMBL:AGG87837.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_944_27
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31810..33036)
DNA (1227bp) protein (409aa)
Cytosine deaminase-like metal-dependent hydrolase n=1 Tax=Rhodanobacter denitrificans RepID=M4NJ54_9GAMM rbh
cytosine deaminase-like metal-dependent hydrolase rbh
Cytosine deaminase-like metal-dependent hydrolase {ECO:0000313|EMBL:AGG87836.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_944_28
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33041..33925)
DNA (885bp) protein (295aa)
Methylase involved in ubiquinone/menaquinone biosynthesis n=1 Tax=Rhodanobacter denitrificans RepID=M4NB46_9GAMM rbh
methylase involved in ubiquinone/menaquinone biosynthesis rbh
Methylase involved in ubiquinone/menaquinone biosynthesis {ECO:0000313|EMBL:AGG87835.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_944_29
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34084..34902)
DNA (819bp) protein (273aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WT56_9GAMM rbh
uncharacterized protein involved in exopolysaccharide biosynthesis rbh
Uncharacterized protein involved in exopolysaccharide biosynthesis {ECO:0000313|EMBL:AGG87834.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_944_30
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34913..36082)
DNA (1170bp) protein (390aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WT57_9GAMM rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AGG87833.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Displaying items 1-30 of 43 in total

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