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scnpilot_solids1_trim150_scaffold_1008

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_1008_1
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1..129)
DNA (129bp) protein (43aa)
ATP synthase subunit b n=1 Tax=Rhodanobacter denitrificans RepID=I4WMX7_9GAMM
ATP synthase, F0 subunit b
ATP synthase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATP synthase F(0) sector subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATPase subunit I {ECO:0000256|HAMAP-Rule:MF_01398}; F-type ATPase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_1008_2
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(220..498)
DNA (279bp) protein (93aa)
F0F1 ATP synthase subunit C n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WFN0_9GAMM
ATP synthase subunit c {ECO:0000256|SAAS:SAAS00242778}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
ATP synthase F0 subcomplex C subunit
scnpilot_solids1_trim150_scaffold_1008_3
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(567..1385)
DNA (819bp) protein (273aa)
ATP synthase subunit a n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2K7_9GAMM
F0F1-type ATP synthase, alpha subunit
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids1_trim150_scaffold_1008_4
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1846..2235)
DNA (390bp) protein (130aa)
Phasin protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WMY1_9GAMM
Phasin protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids1_trim150_scaffold_1008_5
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2388..2750)
DNA (363bp) protein (121aa)
6-carboxy-5,6,7,8-tetrahydropterin synthase {ECO:0000256|PIRNR:PIRNR006113}; EC=4.-.-.- {ECO:0000256|PIRNR:PIRNR006113};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
6-carboxy-5,6,7,8-tetrahydropterin synthase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WFM6_9GAMM
queuosine biosynthesis protein QueD
scnpilot_solids1_trim150_scaffold_1008_trna_1
unknown

Not on your lists

comp(2813..2886)
DNA (74bp)
transferRNA Met
scnpilot_solids1_trim150_scaffold_1008_6
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3066..3626
DNA (561bp) protein (187aa)
RNA pyrophosphohydrolase {ECO:0000256|HAMAP-Rule:MF_00298, ECO:0000256|SAAS:SAAS00016246}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_00298, ECO:0000256|SAAS:SAAS00016219};; (Di)nucleoside polyphosphate hydrolase {ECO:0000256|HAMAP-Rule:MF_00298}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
RNA pyrophosphohydrolase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WFL2_9GAMM rbh
NTP pyrophosphohydrolase rbh
scnpilot_solids1_trim150_scaffold_1008_7
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3683..3889
DNA (207bp) protein (69aa)
Bacterioferritin-associated ferredoxin n=1 Tax=Rhodanobacter denitrificans RepID=I4WJ46_9GAMM
bacterioferritin-associated ferredoxin
Bacterioferritin-associated ferredoxin {ECO:0000313|EMBL:AGG90879.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_1008_8
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4018..4488
DNA (471bp) protein (157aa)
Ferroxidase {ECO:0000256|PIRNR:PIRNR002560}; EC=1.16.3.1 {ECO:0000256|PIRNR:PIRNR002560};; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
Bacterioferritin n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VLQ8_9GAMM rbh
bacterioferritin
scnpilot_solids1_trim150_scaffold_1008_9
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4601..5356
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NTS1_9GAMM rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AGG90881.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_1008_10
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5343..5771
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WJ43_9GAMM
Integral membrane protein CcmA involved in cell shape determination
Integral membrane protein CcmA involved in cell shape determination {ECO:0000313|EMBL:AGG90882.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_1008_11
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5818..6186
DNA (369bp) protein (123aa)
Iron-sulfur cluster insertion protein ErpA n=1 Tax=Rhodanobacter denitrificans RepID=I4WJ42_9GAMM
Iron-sulfur cluster assembly accessory protein
Iron-sulfur cluster insertion protein ErpA {ECO:0000256|HAMAP-Rule:MF_01380}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_1008_12
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6197..7171
DNA (975bp) protein (325aa)
Zn-finger containing NTP pyrophosphohydrolase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WFK6_9GAMM rbh
Zn-finger containing NTP pyrophosphohydrolase {ECO:0000313|EMBL:EIL98247.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Zn-finger containing NTP pyrophosphohydrolase rbh
scnpilot_solids1_trim150_scaffold_1008_13
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7471..8340
DNA (870bp) protein (290aa)
Membrane protein required for beta-lactamase induction n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WFK4_9GAMM rbh
Membrane protein required for beta-lactamase induction {ECO:0000313|EMBL:EIL98245.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
membrane protein required for beta-lactamase induction rbh
scnpilot_solids1_trim150_scaffold_1008_14
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8349..10223)
DNA (1875bp) protein (625aa)
1-acyl-sn-glycerol-3-phosphate acyltransferase n=1 Tax=Rhodanobacter denitrificans RepID=M4NLD8_9GAMM rbh
1-acyl-sn-glycerol-3-phosphate acyltransferase {ECO:0000313|EMBL:AGG90887.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
1-acyl-sn-glycerol-3-phosphate acyltransferase rbh
scnpilot_solids1_trim150_scaffold_1008_15
Lysobacter defluvii, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10486..13503)
DNA (3018bp) protein (1006aa)
Putative TonB dependent receptor protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WJU6_9GAMM
Oar protein {ECO:0000313|EMBL:KGO98358.1}; TaxID=1385515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter defluvii IMMIB APB-9 = DSM 18482.;"
Oar protein
scnpilot_solids1_trim150_scaffold_1008_16
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13870..14430
DNA (561bp) protein (187aa)
Uncharacterized protein n=2 Tax=Rhodanobacter denitrificans RepID=M4NJ09_9GAMM rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AGG90889.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_1008_17
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14500..16647)
DNA (2148bp) protein (716aa)
glycyl-tRNA synthetase beta chain (EC:6.1.1.14) rbh
Glycine--tRNA ligase beta subunit n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WFK0_9GAMM rbh
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids1_trim150_scaffold_1008_18
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16644..17567)
DNA (924bp) protein (308aa)
glycyl-tRNA synthetase alpha chain (EC:6.1.1.14) rbh
Glycine--tRNA ligase alpha subunit n=1 Tax=Rhodanobacter denitrificans RepID=I4WJ33_9GAMM rbh
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids1_trim150_scaffold_1008_19
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17665..18873
DNA (1209bp) protein (403aa)
Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB n=1 Tax=Rhodanobacter denitrificans RepID=I4WJ32_9GAMM
Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB {ECO:0000313|EMBL:EIL98239.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB
Displaying 20 items

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