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scnpilot_solids1_trim150_scaffold_1135

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_1135_1
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..265
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NDS3_9GAMM
dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein
Uncharacterized protein {ECO:0000313|EMBL:AGG88920.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_1135_2
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

384..1085
DNA (702bp) protein (234aa)
Pirin-related protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NMJ7_9GAMM
Pirin-related protein
Pirin-related protein {ECO:0000313|EMBL:AGG88921.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_1135_3
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1228..2304
DNA (1077bp) protein (359aa)
O-6-methylguanine DNA methyltransferase n=1 Tax=Rhodanobacter denitrificans RepID=M4NFS8_9GAMM
O-6-methylguanine DNA methyltransferase
O-6-methylguanine DNA methyltransferase {ECO:0000313|EMBL:AGG88922.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_1135_4
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2301..3032
DNA (732bp) protein (244aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WXL0_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG88923.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_1135_5
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3029..3682
DNA (654bp) protein (218aa)
Alpha-ketoglutarate-dependent dioxygenase AlkB n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WIB2_9GAMM rbh
Alpha-ketoglutarate-dependent dioxygenase AlkB {ECO:0000313|EMBL:EIL99203.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
alkylated DNA repair protein
scnpilot_solids1_trim150_scaffold_1135_6
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3672..4310
DNA (639bp) protein (213aa)
DNA-3-methyladenine glycosylase II n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WIB1_9GAMM rbh
DNA-3-methyladenine glycosylase II {ECO:0000313|EMBL:EIL99202.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
HhH-GPD superfamily base excision DNA repair protein rbh
scnpilot_solids1_trim150_scaffold_1135_7
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4291..4716)
DNA (426bp) protein (142aa)
Putative membrane protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NMK3_9GAMM
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:AGG88926.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_1135_8
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4726..5067)
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NFT1_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG88927.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_1135_9
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5242..6165
DNA (924bp) protein (308aa)
Beta-lactamase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6X3_9GAMM
Beta-lactamase {ECO:0000313|EMBL:EIL95214.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Zn-dependent hydrolase, glyoxylase
scnpilot_solids1_trim150_scaffold_1135_10
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6181..7056)
DNA (876bp) protein (292aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WIA8_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL99199.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Zn-dependent hydrolase, glyoxylase
scnpilot_solids1_trim150_scaffold_1135_11
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7158..7505)
DNA (348bp) protein (116aa)
tRNA-binding protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WIA7_9GAMM
tRNA-binding protein {ECO:0000313|EMBL:EIL99198.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
EMAP domain-containing protein
scnpilot_solids1_trim150_scaffold_1135_12
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7502..8791)
DNA (1290bp) protein (430aa)
FAD dependent oxidoreductase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WIA6_9GAMM rbh
FAD dependent oxidoreductase {ECO:0000313|EMBL:EIL99197.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
glycine/D-amino acid oxidase, deaminating
scnpilot_solids1_trim150_scaffold_1135_13
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8870..9745)
DNA (876bp) protein (292aa)
UDP-glucose pyrophosphorylase (EC:2.7.7.9) rbh
UTP--glucose-1-phosphate uridylyltransferase {ECO:0000256|RuleBase:RU361259}; EC=2.7.7.9 {ECO:0000256|RuleBase:RU361259};; UDP-glucose pyrophosphorylase {ECO:0000256|RuleBase:RU361259}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
UDP-glucose pyrophosphorylase n=1 Tax=Rhodanobacter denitrificans RepID=I4WXK1_9GAMM rbh
scnpilot_solids1_trim150_scaffold_1135_14
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9742..11640)
DNA (1899bp) protein (633aa)
Putative nucleoside-diphosphate sugar epimerase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WIA4_9GAMM rbh
Putative nucleoside-diphosphate sugar epimerase {ECO:0000313|EMBL:EIL99195.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
putative nucleoside-diphosphate sugar epimerase rbh
scnpilot_solids1_trim150_scaffold_1135_15
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11627..12649)
DNA (1023bp) protein (341aa)
UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WIA3_9GAMM rbh
UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase {ECO:0000313|EMBL:EIL99194.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase rbh
scnpilot_solids1_trim150_scaffold_1135_16
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12685..13857)
DNA (1173bp) protein (391aa)
Putative N-acetylglucosaminyl transferase n=1 Tax=Rhodanobacter denitrificans RepID=M4NDU0_9GAMM rbh
putative N-acetylglucosaminyl transferase rbh
Lipopolysaccharide assembly protein B {ECO:0000256|HAMAP-Rule:MF_00994}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_1135_17
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13854..14102)
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WXJ7_9GAMM
Protein of unknown function (DUF1049)
Uncharacterized protein {ECO:0000313|EMBL:AGG88936.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_1135_18
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14271..14570)
DNA (300bp) protein (100aa)
Integration host factor subunit beta n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WIA0_9GAMM
Integration host factor subunit beta {ECO:0000256|HAMAP-Rule:MF_00381, ECO:0000256|RuleBase:RU003941}; Short=IHF-beta {ECO:0000256|HAMAP-Rule:MF_00381};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
integration host factor, beta subunit
scnpilot_solids1_trim150_scaffold_1135_19
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(14649..15851)
DNA (1203bp) protein (401aa)
30S ribosomal protein S1 n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WI99_9GAMM
30S ribosomal protein S1 {ECO:0000256|PIRNR:PIRNR002111}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
SSU ribosomal protein S1P
Displaying 19 items

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