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scnpilot_solids1_trim150_scaffold_1569

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_1569_1
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1..1164)
DNA (1164bp) protein (388aa)
Glutamine synthetase {ECO:0000256|RuleBase:RU004356}; EC=6.3.1.2 {ECO:0000256|RuleBase:RU004356};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
L-glutamine synthetase (EC:6.3.1.2)
Glutamine synthetase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WC22_9GAMM
scnpilot_solids1_trim150_scaffold_1569_2
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1354..2673)
DNA (1320bp) protein (440aa)
Ammonium transporter n=1 Tax=Rhodanobacter denitrificans RepID=I4WUQ8_9GAMM rbh
ammonium transporter rbh
Ammonium transporter {ECO:0000256|RuleBase:RU362002}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_1569_3
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2695..3033)
DNA (339bp) protein (113aa)
Nitrogen regulatory protein PII n=1 Tax=Rhodanobacter denitrificans RepID=I4WUQ7_9GAMM
nitrogen regulatory protein PII
Nitrogen regulatory protein PII {ECO:0000313|EMBL:AGG87262.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_1569_4
unknown

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3087..3776
DNA (690bp) protein (230aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_1569_5
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4124..4987)
DNA (864bp) protein (288aa)
lipid A biosynthesis acyltransferase n=1 Tax=Janthinobacterium lividum RepID=UPI000287F311
Uncharacterized protein {ECO:0000313|EMBL:EQM80012.1}; TaxID=1333853 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia MF89.;"
scnpilot_solids1_trim150_scaffold_1569_6
unknown

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comp(5200..5952)
DNA (753bp) protein (251aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_1569_7
Bacteroides coprophilus CAG:333, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(5949..7172)
DNA (1224bp) protein (408aa)
hypothetical protein n=1 Tax=Janthinobacterium lividum RepID=UPI000288BEF7
Putative membrane protein {ECO:0000313|EMBL:CDC55421.1}; TaxID=1263041 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides coprophilus CAG:333.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1569_8
unknown

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comp(7195..7314)
DNA (120bp) protein (40aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_1569_9
unknown

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comp(7325..7444)
DNA (120bp) protein (40aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_1569_10
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7564..8619)
DNA (1056bp) protein (352aa)
GumN protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NTH8_9GAMM
GumN protein
GumN protein {ECO:0000313|EMBL:AGG90796.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_1569_11
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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8917..9714
DNA (798bp) protein (266aa)
Undecaprenyl-diphosphatase n=1 Tax=Rhodanobacter denitrificans RepID=I4WUQ5_9GAMM rbh
putative bacitracin resistance protein rbh
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids1_trim150_scaffold_1569_12
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9739..10698)
DNA (960bp) protein (320aa)
Transcriptional regulator n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WC18_9GAMM rbh
Transcriptional regulator {ECO:0000313|EMBL:EIL97009.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
transcriptional regulator rbh
scnpilot_solids1_trim150_scaffold_1569_13
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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10842..12095
DNA (1254bp) protein (418aa)
RND family efflux transporter, MFP subunit n=1 Tax=Rhodanobacter denitrificans RepID=M4NCU4_9GAMM
RND family efflux transporter, MFP subunit
RND family efflux transporter, MFP subunit {ECO:0000313|EMBL:AGG87258.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_1569_14
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12217..12333
DNA (117bp) protein (39aa)
Hydrophobe/amphiphile efflux-1 (HAE1) family transporter n=1 Tax=Rhodanobacter denitrificans RepID=M4NBV7_9GAMM
hydrophobe/amphiphile efflux-1 (HAE1) family transporter
Hydrophobe/amphiphile efflux-1 (HAE1) family transporter {ECO:0000313|EMBL:AGG87257.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_1569_15
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12330..13268
DNA (939bp) protein (313aa)
Hydrophobe/amphiphile efflux-1 (HAE1) family transporter n=1 Tax=Rhodanobacter denitrificans RepID=I4WUQ2_9GAMM
hydrophobe/amphiphile efflux-1 (HAE1) family transporter
Hydrophobe/amphiphile efflux-1 (HAE1) family transporter {ECO:0000313|EMBL:AGG87257.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Displaying 15 items

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