ggKbase home page

scnpilot_solids1_trim150_scaffold_525_22

Organism: SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_69_165

near complete RP 49 / 55 MC: 1 BSCG 47 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: comp(18541..19308)

Top 3 Functional Annotations

Value Algorithm Source
triosephosphate isomerase (EC:5.3.1.1) similarity KEGG
DB: KEGG
  • Identity: 92.9
  • Coverage: 255.0
  • Bit_score: 472
  • Evalue 9.20e-131
  • rbh
Triosephosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517}; Short=TIM {ECO:0000256|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517};; Triose-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.9
  • Coverage: 255.0
  • Bit_score: 472
  • Evalue 4.10e-130
Triosephosphate isomerase n=1 Tax=Rhodanobacter denitrificans RepID=M4NNG7_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 92.9
  • Coverage: 255.0
  • Bit_score: 472
  • Evalue 2.90e-130
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodanobacter denitrificans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 768
ATGCGCAAGAAATTCGTCGCCGGCAACTGGAAAATGCACGGCAGCCGTTCGATGGCCAAAGCCCTGCTGGACGACATCGCCGCCGGCATGCCGGACGGCATCGACGTGGCCGTGTTTCCGCCGTTTCCCTATGTGGCCGAACTGGCCTGGCAACATGCCGAATCCCGGGTAGGCATCGGCGCGCAGGATGTCAGCGAGCACGAGGGGCAAGGCGCGTATACCGGCGAAGTCTCCGCCGCCATGCTCGCCGATGTCGGCGCGCAGTGGGTGCTGGTCGGCCATTCCGAACGTCGCCAGTACCACGGCGAGAGCGACGAGCTGGTGGCGCGCAAGTTCGCCGCGGCCCGTGCCGGCGGCCTGACTCCGATCCTGTGCGTGGGCGAGACGCTGGCACAGCGCCAGGCCGGCGAAACCGAAGCGGTCGTCGCGCGGCAGTTGCAGGCCGTGTTGGCGCTCAACGGCGTGGCCAGCTTCGATACGGCGGTGATCGCATACGAGCCGGTCTGGGCCATCGGCACCGGCCATACTGCGAGCCCGGAACAGGCGCAGCAGGTGCACGCCTTCATTCGTAGCCAACTGGAAAAAGAAGATGTTATGATTGCCCGTCTGACCCGACTGCTTTACGGCGGCAGCGTCAAGGCGGCCAATGCCGCGGAATTGTTCGCGCAGGCGGACGTGGATGGAGGGCTGATCGGCGGGGCCTCCCTGACCGCATCCGACTTCCTTGGAATCTGCGCCGCGGCGCACCAGGCGCCACAGGCTCGATAG
PROTEIN sequence
Length: 256
MRKKFVAGNWKMHGSRSMAKALLDDIAAGMPDGIDVAVFPPFPYVAELAWQHAESRVGIGAQDVSEHEGQGAYTGEVSAAMLADVGAQWVLVGHSERRQYHGESDELVARKFAAARAGGLTPILCVGETLAQRQAGETEAVVARQLQAVLALNGVASFDTAVIAYEPVWAIGTGHTASPEQAQQVHAFIRSQLEKEDVMIARLTRLLYGGSVKAANAAELFAQADVDGGLIGGASLTASDFLGICAAAHQAPQAR*