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scnpilot_solids1_trim150_scaffold_543_11

Organism: SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_69_165

near complete RP 49 / 55 MC: 1 BSCG 47 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: 9058..9813

Top 3 Functional Annotations

Value Algorithm Source
LytTR family two component transcriptional regulator n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VU50_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 93.6
  • Coverage: 250.0
  • Bit_score: 474
  • Evalue 5.80e-131
LytTR family two component transcriptional regulator {ECO:0000313|EMBL:EIL90741.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.6
  • Coverage: 250.0
  • Bit_score: 474
  • Evalue 8.10e-131
LytTR family two component transcriptional regulator; K02477 two-component system, LytT family, response regulator similarity KEGG
DB: KEGG
  • Identity: 43.6
  • Coverage: 250.0
  • Bit_score: 202
  • Evalue 1.30e-49

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Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 756
GTGAACACGCCGCGCCTGCGCACCGTGCTGGTCGACGACGAGGTACTGGCGCGCCTCGCGCTGCGCCAGGCGCTGGCCAGCCACCGCGAAGTGGAGATCGTCGGCGAATGCGGCAACGCCGCCGAGGCCATGCAGGCGGTGCGCGCGTTGCGCCCGGACCTGCTGTTCCTGGACATCCAGATGCCCGGCATGGACGGTTTCGAGCTGTTGCACGAACTGGCCCCCGACCGCCTGCCGCTGGTGGTGTTCGCCACCGCCTTCGCCGAACACGCGCTGCGCGCGTTCGATGCGATGGCGCTGGACTACGTGCTCAAGCCGATCGAACAGGCCCGCTTCGACCAGGCGATGGCGCGCGTCAACCAGCACTGGCAAGGCCTGCACGCCGCGGCCGGCCCCGCGCTCGAGAGCGCGCCGGCCGAAGGCTACGCACAGCGCCTCAGCGTGCGCCACGGCGAACACATCCGCGTGCTCGCCATCGACGACATCGACTGGATCCGCGCCGACGGCAACTACCTGCACATCCACGTCGGCCCGGTCCGCTACCTGCACCGCGACACCCTGCGCCACCTGCTGCTGCAACTCGACCCCACGCGCTTCCTGCGCATCCACCGCGGCACCCTGGTCAACCTGGCGCGCGTCCGCGAGGTGCATCCGCTGTTCAAGGGTGGGGCGGAGATCGTGTTGCACGACGGCACCAGGCTGGACCTGAGTCGGCGGTTTCGTGCAGGTGCACGCAGCGTGCTTGGCTTGCCCTGA
PROTEIN sequence
Length: 252
VNTPRLRTVLVDDEVLARLALRQALASHREVEIVGECGNAAEAMQAVRALRPDLLFLDIQMPGMDGFELLHELAPDRLPLVVFATAFAEHALRAFDAMALDYVLKPIEQARFDQAMARVNQHWQGLHAAAGPALESAPAEGYAQRLSVRHGEHIRVLAIDDIDWIRADGNYLHIHVGPVRYLHRDTLRHLLLQLDPTRFLRIHRGTLVNLARVREVHPLFKGGAEIVLHDGTRLDLSRRFRAGARSVLGLP*