ggKbase home page

scnpilot_solids1_trim150_scaffold_1136_6

Organism: SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_69_165

near complete RP 49 / 55 MC: 1 BSCG 47 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: 4464..4937

Top 3 Functional Annotations

Value Algorithm Source
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395}; Short=MECDP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPS {ECO:0000256|HAMAP-Rule:MF_00107};; EC=4.6.1.12 {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxy similarity UNIPROT
DB: UniProtKB
  • Identity: 92.4
  • Coverage: 157.0
  • Bit_score: 305
  • Evalue 5.30e-80
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC:4.6.1.12) similarity KEGG
DB: KEGG
  • Identity: 90.4
  • Coverage: 156.0
  • Bit_score: 298
  • Evalue 1.50e-78
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WPH7_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 92.4
  • Coverage: 157.0
  • Bit_score: 305
  • Evalue 3.80e-80
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 474
ATGCGCATAGGACAGGGCTTCGACGTACATGCATTCGGCGCGGGCGACCACATCACCCTGGGCGGCGTGCGCGTGCCGCACGGCCGCGGCGTGGTGGCGCACTCGGACGGCGACGTGGTGATCCACGCGCTGTGCGACGCGATCTTCGGCGCGCTGGCGCTGGGCGACATCGGCCAGCACTTTCCGCCCTCCGACGAGCGCTGGCGTGGCGCCGACAGCCGCCAGTTCCTGCGCCACGCGGCGCTGCTGATGGCGCAGCACGGCTACGCGCTGGGCAACGCCGACGTCACCGTGATCGGCGAGGCGCCGAAGGTCGGACCGCATGCGCAGGCGATGCGCGAGAACCTTGCCGCCGACCTGGGCTGCGAACTCGGCCGCGTCAGCGTGAAGGCCACCACCACCGAAAAGCTCGGCTTCTGCGGCCGTGGCGAAGGGATTGCCGCGCAGGCGTGCGTCCTGCTGGAGCGCCTGTGA
PROTEIN sequence
Length: 158
MRIGQGFDVHAFGAGDHITLGGVRVPHGRGVVAHSDGDVVIHALCDAIFGALALGDIGQHFPPSDERWRGADSRQFLRHAALLMAQHGYALGNADVTVIGEAPKVGPHAQAMRENLAADLGCELGRVSVKATTTEKLGFCGRGEGIAAQACVLLERL*