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scnpilot_solids1_trim150_scaffold_2421_1

Organism: SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_69_165

near complete RP 49 / 55 MC: 1 BSCG 47 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: comp(2..1603)

Top 3 Functional Annotations

Value Algorithm Source
RNAse R (EC:3.1.-.-) similarity KEGG
DB: KEGG
  • Identity: 94.8
  • Coverage: 517.0
  • Bit_score: 965
  • Evalue 5.50e-279
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.8
  • Coverage: 517.0
  • Bit_score: 965
  • Evalue 2.50e-278
Ribonuclease R n=1 Tax=Rhodanobacter denitrificans RepID=M4NGE8_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 94.8
  • Coverage: 517.0
  • Bit_score: 965
  • Evalue 1.80e-278

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Taxonomy

Rhodanobacter denitrificans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1602
ATGCTCTGCGACGTGGCATTCTCCGCGGCGCAAACATCACAAGGACCCCGAGTGACCAGAAAAACTCCCCCCCGTTCCGGCAATCCCCGCGACGCGCGCTCCGCGAAGAAAACCGCCAGTCGGGCGCCGCGAGCCGTCGCTGCGCCGGACAAGCGCAGCAAGGCTGCCGCAGGCGCCGTGCGCGACCCGTACGCCGATCGCGAGGCGCAGCGTTATGCGCGCCCGATCCCCAGTCGCGAGGCGATCCTCGCCCTGCTCGAACAGCGCGGCGAATTGCTGACCGAGGCGCGCATCGCCGCAGCGCTCGATATCCACGACGAAACCGACCTCGAGGCGCTGCGCAAGCGGCTCGCCGCGATGGTGCGCGACGGCCAGTTGCTGCTGGGCCGGCGCGGCGGCTACGCGCCGACCCGGAAACTCGACCTGATCGCCGGCGTGGTGCTGGCCAACGCCGAGGGCTACGGCTTCCTGCGCCCGGACGAGGGCGGCGACGACCTGTACCTGTCGCCGCAGCAGATGCGCGCGGTCATGCACGGCGACCGCGTGCTGGCCAGCGTGGTCGGCATCGACCGCCGCGGGCGCCGGCAGGGCGCGGTCGCCGAAGTGCTGCAGCGGCGTTCGCCGCGGCTGGTCGGCCGGGTGGTGATCGACAACGGCGTGACCCTGGTGACCCCGGACGACCGCCGCCTCATCCAGGACGTGATGATCAAGCCGGGCAAGGAGCAGGACGCCCGATCCGGCCAGATCGTGGTGGCCGAGATCACCGACCCGCCGACCTTGCAGCGTGGCCCGATCGGCGAGATCCGCGCCGTGCTGGGCGAGCGCCTGCAGCCCTCGCTGGTGGTGGAAATGGCGATCGCCAGCCACGACCTGCCGCACGAATGGCCAGCCGAGGTGCTGCGCGACGCGGCGCAGGTGGAATCGGCGGTGACCGCCGCCGAGCGCGAGGGCCGCACCGACCTGCGCAAGCTGCCGCTGGTGACCATCGACGGCGCCGACGCGCGCGACTTCGACGATGCCGTGTACGCCGAGCCGCGGCGCGGCGGCGGCTGGCGGCTGATCGTGGCGATCGCCGACGTCTCGCACTACGTGCAGGTCGGCAATGCGTTGGACCGGGAAGCGTTCGAGCGCAGCACCTCCACCTACTTCCCCGGTTTCGTGGTGCCGATGCTGCCGGAGACGCTGTCCAACGGCATCTGCTCGCTGAATCCGCAGGTCGAGCGGCTGTGCATGGTCTGCGACATGCAGGTCGACGCCGAAGGCAGCGTGGTCAAGTCGAGGTTCTACGACGCGGTGATGCTGTCGCATGCGCGGCTCACCTACGACAAGGTCTGGCAGGCGGTGGGCCTGCGCGATCCGGACGCGCGCCACGAGGTGGCCGACGTGCTGCCGCAGCTGGAGAACCTGCATGCGCTGTACAAGGCGATGGCCGCGCAGCGCAAGCGCCGCGGCGCGATCGACTTCGAGACGCCGGAGGTGAAGTTCCGCCTCGACCAGACCGGCGGCGTCGAGTCGATGGGCGCCACCGAGCGCAACGACGCGCACAAGCTGATCGAGGAATGCATGATCGCCGCCAACGTGCAGGCGGCGCTGTTCCTGGAG
PROTEIN sequence
Length: 534
MLCDVAFSAAQTSQGPRVTRKTPPRSGNPRDARSAKKTASRAPRAVAAPDKRSKAAAGAVRDPYADREAQRYARPIPSREAILALLEQRGELLTEARIAAALDIHDETDLEALRKRLAAMVRDGQLLLGRRGGYAPTRKLDLIAGVVLANAEGYGFLRPDEGGDDLYLSPQQMRAVMHGDRVLASVVGIDRRGRRQGAVAEVLQRRSPRLVGRVVIDNGVTLVTPDDRRLIQDVMIKPGKEQDARSGQIVVAEITDPPTLQRGPIGEIRAVLGERLQPSLVVEMAIASHDLPHEWPAEVLRDAAQVESAVTAAEREGRTDLRKLPLVTIDGADARDFDDAVYAEPRRGGGWRLIVAIADVSHYVQVGNALDREAFERSTSTYFPGFVVPMLPETLSNGICSLNPQVERLCMVCDMQVDAEGSVVKSRFYDAVMLSHARLTYDKVWQAVGLRDPDARHEVADVLPQLENLHALYKAMAAQRKRRGAIDFETPEVKFRLDQTGGVESMGATERNDAHKLIEECMIAANVQAALFLE