ggKbase home page

scnpilot_solids1_trim150_scaffold_2421

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_2421_1
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..1603)
DNA (1602bp) protein (534aa)
RNAse R (EC:3.1.-.-)
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Ribonuclease R n=1 Tax=Rhodanobacter denitrificans RepID=M4NGE8_9GAMM
scnpilot_solids1_trim150_scaffold_2421_trna_1
unknown

Not on your lists

1684..1767
DNA (84bp)
transferRNA Leu
scnpilot_solids1_trim150_scaffold_2421_2
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1838..2470)
DNA (633bp) protein (211aa)
Putative uncharacterized protein n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7UT49_PSEUP
hypothetical protein
Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
scnpilot_solids1_trim150_scaffold_2421_3
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2467..5718)
DNA (3252bp) protein (1084aa)
DNA polymerase III subunit alpha (EC:2.7.7.7); K14162 error-prone DNA polymerase [EC:2.7.7.7]
DNA polymerase n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI000381B0A1
Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
scnpilot_solids1_trim150_scaffold_2421_4
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5715..7133)
DNA (1419bp) protein (473aa)
DNA repair nucleotidyltransferase n=1 Tax=Xanthomonas axonopodis RepID=UPI0002DE9BEA
Stenotrophomonas maltophilia strain ZBG7B contig_61, whole genome shotgun sequence {ECO:0000313|EMBL:KIP83318.1}; TaxID=40324 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (Pseudomonas maltophilia) (Xanthomonas; maltophilia).;"
Nucleotidyltransferase/DNA polymerase involved in DNA repair; K14161 protein ImuB
scnpilot_solids1_trim150_scaffold_2421_5
RIFOXYA1_FULL_Xanthomonadales_68_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7143..7769)
DNA (627bp) protein (209aa)
CDP-6-deoxy-delta-3,4-glucoseen reductase n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0002EC3420
hypothetical protein
Tax=RIFOXYA1_FULL_Xanthomonadales_68_6_curated
scnpilot_solids1_trim150_scaffold_2421_6
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7772..8383)
DNA (612bp) protein (204aa)
LexA repressor (EC:3.4.21.88)
LexA repressor n=1 Tax=Xanthomonas fuscans subsp. fuscans RepID=U4M8D0_9XANT
Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
scnpilot_solids1_trim150_scaffold_2421_7
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8864..9271)
DNA (408bp) protein (136aa)
Lactoylglutathione lyase-like lyase n=1 Tax=Rhodanobacter denitrificans RepID=M4NDA8_9GAMM
lactoylglutathione lyase-like lyase
Lactoylglutathione lyase-like lyase {ECO:0000313|EMBL:AGG88730.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_2421_8
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9619..10104
DNA (486bp) protein (162aa)
glycine dehydrogenase, decarboxylating (EC:1.4.4.2)
Glycine dehydrogenase (decarboxylating) {ECO:0000256|HAMAP-Rule:MF_00711}; EC=1.4.4.2 {ECO:0000256|HAMAP-Rule:MF_00711};; Glycine cleavage system P-protein {ECO:0000256|HAMAP-Rule:MF_00711}; Glycine decarboxylase {ECO:0000256|HAMAP-Rule:MF_00711}; Glycine dehydrogenase (aminomethyl-transferring) {ECO:0000256|HAMAP-Rule:MF_00711}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Glycine dehydrogenase (decarboxylating) n=1 Tax=Rhodanobacter denitrificans RepID=I4WY26_9GAMM
Displaying 9 items

View Taxonomy