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scnpilot_solids1_trim150_scaffold_376

Search features with annotation key words

Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_376_1
Photobacterium profundum, Photobacterium, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(83..436)
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Photobacterium profundum 3TCK RepID=Q1YVT6_PHOPR
Uncharacterized protein {ECO:0000313|EMBL:EAS40399.1}; TaxID=314280 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Photobacterium.;" source="Photobacterium profundum 3TCK.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_376_2
Turneriella parva, Turneriella, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(426..1058)
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=Turneriella parva (strain ATCC BAA-1111 / DSM 21527 / NCTC 11395 / H) RepID=I4BA89_TURPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFM14196.1}; Flags: Precursor;; TaxID=869212 species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Turneriella.;" source="Turneriella parva (strain ATCC BAA-1111 / DSM 21527 / NCTC 11395 / H); (Leptospira parva).;"
scnpilot_solids1_trim150_scaffold_376_3
Emticicia oligotrophica, Emticicia, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(1321..2514)
DNA (1194bp) protein (398aa)
neuraminidase n=1 Tax=Spirosoma panaciterrae RepID=UPI0003809757 rbh
neuraminidase (sialidase)-like protein rbh
Neuraminidase (Sialidase)-like protein {ECO:0000313|EMBL:AFK05157.1}; Flags: Precursor;; TaxID=929562 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Emticicia.;" source="Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15).;"
scnpilot_solids1_trim150_scaffold_376_4
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2534..3478)
DNA (945bp) protein (315aa)
glycerophosphoryl diester phosphodiesterase; K01126 glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
Glycerophosphoryl diester phosphodiesterase n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y8F7_9SPHI
Glycerophosphoryl diester phosphodiesterase {ECO:0000313|EMBL:EHQ25875.1}; Flags: Precursor;; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
scnpilot_solids1_trim150_scaffold_376_5
Cyclobacterium marinum, Cyclobacterium, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(3551..6589)
DNA (3039bp) protein (1013aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037A3021
membrane-bound dehydrogenase domain-containing protein
Membrane-bound dehydrogenase domain protein {ECO:0000313|EMBL:AEL27485.1}; Flags: Precursor;; TaxID=880070 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cyclobacterium.;" source="Cyclobacterium marinum (strain ATCC 25205 / DSM 745) (Flectobacillus; marinus).;"
scnpilot_solids1_trim150_scaffold_376_6
Cyclobacteriaceae bacterium AK24, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(6665..8989)
DNA (2325bp) protein (775aa)
Uncharacterized protein n=1 Tax=Cyclobacteriaceae bacterium AK24 RepID=R7ZWC0_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:EON78294.1}; TaxID=1288963 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; unclassified Cyclobacteriaceae.;" source="Cyclobacteriaceae bacterium AK24.;"
hypothetical protein rbh
scnpilot_solids1_trim150_scaffold_376_7
Cyclobacterium qasimii, Cyclobacterium, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(8993..10774)
DNA (1782bp) protein (594aa)
Uncharacterized protein n=1 Tax=Cyclobacterium qasimii M12-11B RepID=S7WF07_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:EPR65344.1}; TaxID=641524 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cyclobacterium.;" source="Cyclobacterium qasimii M12-11B.;"
metallophosphoesterase rbh
scnpilot_solids1_trim150_scaffold_376_8
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(11038..13248)
DNA (2211bp) protein (737aa)
Uncharacterized protein n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EGU7_RUNSL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI49131.1}; Flags: Precursor;; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;"
scnpilot_solids1_trim150_scaffold_376_9
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(13328..14986)
DNA (1659bp) protein (553aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036AB14F rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEI49135.1}; Flags: Precursor;; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;"
scnpilot_solids1_trim150_scaffold_376_10
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(15018..18515)
DNA (3498bp) protein (1166aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003780026 rbh
TonB-dependent receptor plug {ECO:0000313|EMBL:AEI49134.1}; Flags: Precursor;; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;"
TonB-dependent receptor plug rbh
scnpilot_solids1_trim150_scaffold_376_11
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(19121..19993)
DNA (873bp) protein (291aa)
cysteine synthase B; K12339 cysteine synthase B [EC:2.5.1.47]
Cysteine synthase {ECO:0000256|RuleBase:RU003985}; EC=2.5.1.47 {ECO:0000256|RuleBase:RU003985};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Cysteine synthase B n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TFB3_NIAKG
scnpilot_solids1_trim150_scaffold_376_12
Arcticibacter svalbardensis, Arcticibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(19995..20645)
DNA (651bp) protein (217aa)
Serine acetyltransferase {ECO:0000313|EMBL:EOR93438.1}; EC=2.3.1.30 {ECO:0000313|EMBL:EOR93438.1};; TaxID=1150600 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Arcticibacter.;" source="Arcticibacter svalbardensis MN12-7.;"
Serine acetyltransferase n=1 Tax=Arcticibacter svalbardensis MN12-7 RepID=R9GNY7_9SPHI
transferase hexapeptide repeat containing protein
scnpilot_solids1_trim150_scaffold_376_13
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

21183..21779
DNA (597bp) protein (199aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PHJ4_CHIPD
ECF subfamily RNA polymerase sigma-24 subunit
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ACU59930.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_solids1_trim150_scaffold_376_14
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

21902..22825
DNA (924bp) protein (308aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00036872F6
Putative uncharacterized protein {ECO:0000313|EMBL:EHQ25027.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_376_15
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

23089..24147
DNA (1059bp) protein (353aa)
Anti-FecI sigma factor, FecR n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PHJ1_CHIPD rbh
anti-FecI sigma factor FecR rbh
Anti-FecI sigma factor, FecR {ECO:0000313|EMBL:ACU59927.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_solids1_trim150_scaffold_376_16
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

24202..27789
DNA (3588bp) protein (1196aa)
TonB-dependent receptor plug n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6Y0G4_PEDHD rbh
TonB-dependent receptor plug {ECO:0000313|EMBL:ACU02725.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
TonB-dependent receptor plug rbh
scnpilot_solids1_trim150_scaffold_376_17
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

27827..29818
DNA (1992bp) protein (664aa)
RagB/SusD domain protein n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6Y0G5_PEDHD rbh
RagB/SusD domain-containing protein rbh
RagB/SusD domain protein {ECO:0000313|EMBL:ACU02726.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
scnpilot_solids1_trim150_scaffold_376_18
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

29889..31196
DNA (1308bp) protein (436aa)
Putative uncharacterized protein n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6Y0G6_PEDHD rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACU02727.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
scnpilot_solids1_trim150_scaffold_376_19
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

31221..32618
DNA (1398bp) protein (466aa)
Putative uncharacterized protein n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6Y0G7_PEDHD rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACU02728.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
scnpilot_solids1_trim150_scaffold_376_20
unknown

Not on your lists

32848..33402
DNA (555bp) protein (185aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_376_21
Pseudopedobacter saltans, Pseudopedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

33489..34709
DNA (1221bp) protein (407aa)
Uncharacterized protein n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0S8J1_PEDSD rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ADY51275.1}; Flags: Precursor;; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" source="Pseudopedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 /; LMG 10337 / NBRC 100064 / NCIMB 13643) (Pedobacter saltans).;"
scnpilot_solids1_trim150_scaffold_376_22
RLO_PLX_64_10, Bacteria

Not on your lists

34794..38516
DNA (3723bp) protein (1241aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI0003728230 rbh
heparinase II/III family protein
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
scnpilot_solids1_trim150_scaffold_376_23
Pedobacter glucosidilyticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

38615..39865
DNA (1251bp) protein (417aa)
Transporter, major facilitator family protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2FXR2_9SPHI rbh
Putative niacin/nicotinamide transporter NaiP {ECO:0000313|EMBL:KHJ38409.1}; TaxID=1122941 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter glucosidilyticus.;"
major facilitator superfamily protein rbh
scnpilot_solids1_trim150_scaffold_376_24
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

40726..43542
DNA (2817bp) protein (939aa)
peptidase M16 domain-containing protein; K07263 zinc protease [EC:3.4.24.-] rbh
Peptidase M16 domain protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJP4_NIAKG rbh
Peptidase M16 domain protein {ECO:0000313|EMBL:AEW00791.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids1_trim150_scaffold_376_25
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

43555..43887
DNA (333bp) protein (111aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00037F061C
Uncharacterized protein {ECO:0000313|EMBL:AHF16161.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_376_26
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

44009..45100
DNA (1092bp) protein (364aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003758426
YjgP/YjgQ family permease
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
scnpilot_solids1_trim150_scaffold_376_27
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

45223..46548
DNA (1326bp) protein (442aa)
citrate (Si)-synthase; K01647 citrate synthase [EC:2.3.3.1]
Citrate (Si)-synthase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TH82_NIAKG
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
scnpilot_solids1_trim150_scaffold_376_trna_1
unknown

Not on your lists

46907..46979
DNA (73bp)
transferRNA Ala
scnpilot_solids1_trim150_scaffold_376_28
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

47194..49602
DNA (2409bp) protein (803aa)
3-hydroxyacyl-CoA dehydrogenase NAD-binding protein; K07516 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
3-hydroxyacyl-CoA dehydrogenase NAD-binding protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TCU2_NIAKG
3-hydroxyacyl-CoA dehydrogenase NAD-binding protein {ECO:0000313|EMBL:AEW03546.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids1_trim150_scaffold_376_29
Fulvivirga imtechensis, Fulvivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

49719..50315
DNA (597bp) protein (199aa)
Putative transposase n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8JGS3_9BACT
Putative transposase {ECO:0000313|EMBL:ELR68071.1}; TaxID=1237149 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Fulvivirga.;" source="Fulvivirga imtechensis AK7.;"
hypothetical protein
Displaying items 1-30 of 39 in total

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