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scnpilot_solids1_trim150_scaffold_389

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_389_1
unknown

Not on your lists

3..173
DNA (171bp) protein (57aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_389_2
Cyclobacterium marinum, Cyclobacterium, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(429..3536)
DNA (3108bp) protein (1036aa)
Membrane-bound dehydrogenase domain protein n=1 Tax=Cyclobacterium marinum (strain ATCC 25205 / DSM 745) RepID=G0J0K9_CYCMS rbh
Membrane-bound dehydrogenase domain protein {ECO:0000313|EMBL:AEL23925.1}; Flags: Precursor;; TaxID=880070 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cyclobacterium.;" source="Cyclobacterium marinum (strain ATCC 25205 / DSM 745) (Flectobacillus; marinus).;"
membrane-bound dehydrogenase domain-containing protein rbh
scnpilot_solids1_trim150_scaffold_389_3
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3585..5087)
DNA (1503bp) protein (501aa)
Putative uncharacterized protein n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XZ78_PEDHD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU02560.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
scnpilot_solids1_trim150_scaffold_389_4
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5130..6224)
DNA (1095bp) protein (365aa)
Blue (Type 1) copper domain protein n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XZ77_PEDHD
blue (type 1) copper domain-containing protein
Blue (Type 1) copper domain protein {ECO:0000313|EMBL:ACU02559.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
scnpilot_solids1_trim150_scaffold_389_5
GWA2_Bacteroidetes_40_15_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6414..7808)
DNA (1395bp) protein (465aa)
L-alanine-DL-glutamate epimerase-like protein id=3603652 bin=GWC2_Bacteroidetes_40_22 species=Dyadobacter fermentans genus=Dyadobacter taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_40_22 organism_group=Bacteroidetes
L-alanine-DL-glutamate epimerase-like protein
Tax=GWA2_Bacteroidetes_40_15_curated
scnpilot_solids1_trim150_scaffold_389_6
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7862..9316)
DNA (1455bp) protein (485aa)
Putative uncharacterized protein n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XZ78_PEDHD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU02560.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
scnpilot_solids1_trim150_scaffold_389_7
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9578..10522)
DNA (945bp) protein (315aa)
Amidohydrolase 2 n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XZ79_PEDHD rbh
amidohydrolase 2; K07045 rbh
Amidohydrolase 2 {ECO:0000313|EMBL:ACU02561.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
scnpilot_solids1_trim150_scaffold_389_8
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10717..12096)
DNA (1380bp) protein (460aa)
Blue (Type 1) copper domain protein n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XZ77_PEDHD rbh
blue (type 1) copper domain-containing protein rbh
Blue (Type 1) copper domain protein {ECO:0000313|EMBL:ACU02559.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
scnpilot_solids1_trim150_scaffold_389_9
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(12126..12932)
DNA (807bp) protein (269aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI0003638FA5 rbh
amidohydrolase 2 rbh
Amidohydrolase 2 {ECO:0000313|EMBL:ACU02564.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
scnpilot_solids1_trim150_scaffold_389_10
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(12922..13866)
DNA (945bp) protein (315aa)
amidohydrolase n=1 Tax=Niabella aurantiaca RepID=UPI000381FF36
Amidohydrolase {ECO:0000313|EMBL:AHF14517.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
amidohydrolase 2 rbh
scnpilot_solids1_trim150_scaffold_389_11
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13977..14930)
DNA (954bp) protein (318aa)
Amidohydrolase 2 n=1 Tax=Niabella soli DSM 19437 RepID=H1NMB4_9SPHI rbh
Amidohydrolase {ECO:0000313|EMBL:AHF14517.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
amidohydrolase 2
scnpilot_solids1_trim150_scaffold_389_12
GWA2_Bacteroidetes_40_15_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14978..16009)
DNA (1032bp) protein (344aa)
Uncharacterized protein id=4724868 bin=GWC2_Bacteroidetes_40_22 species=unknown genus=Parabacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_40_22 organism_group=Bacteroidetes
amidohydrolase
Tax=GWA2_Bacteroidetes_40_15_curated
scnpilot_solids1_trim150_scaffold_389_13
Cyclobacterium marinum, Cyclobacterium, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(16025..17395)
DNA (1371bp) protein (457aa)
DegT/DnrJ/EryC1/StrS aminotransferase n=1 Tax=Cyclobacterium marinum (strain ATCC 25205 / DSM 745) RepID=G0J0L9_CYCMS rbh
DegT/DnrJ/EryC1/StrS aminotransferase rbh
DegT/DnrJ/EryC1/StrS aminotransferase {ECO:0000313|EMBL:AEL23935.1}; Flags: Precursor;; TaxID=880070 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cyclobacterium.;" source="Cyclobacterium marinum (strain ATCC 25205 / DSM 745) (Flectobacillus; marinus).;"
scnpilot_solids1_trim150_scaffold_389_14
Cyclobacterium marinum, Cyclobacterium, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(17590..19074)
DNA (1485bp) protein (495aa)
RagB/SusD domain-containing protein n=1 Tax=Cyclobacterium marinum (strain ATCC 25205 / DSM 745) RepID=G0J0M2_CYCMS rbh
RagB/SusD domain-containing protein rbh
RagB/SusD domain-containing protein {ECO:0000313|EMBL:AEL23938.1}; Flags: Precursor;; TaxID=880070 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cyclobacterium.;" source="Cyclobacterium marinum (strain ATCC 25205 / DSM 745) (Flectobacillus; marinus).;"
scnpilot_solids1_trim150_scaffold_389_15
Cyclobacterium marinum, Cyclobacterium, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(19107..22499)
DNA (3393bp) protein (1131aa)
TonB-dependent receptor plug n=1 Tax=Cyclobacterium marinum (strain ATCC 25205 / DSM 745) RepID=G0J1T3_CYCMS rbh
TonB-dependent receptor plug {ECO:0000313|EMBL:AEL23939.1}; Flags: Precursor;; TaxID=880070 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cyclobacterium.;" source="Cyclobacterium marinum (strain ATCC 25205 / DSM 745) (Flectobacillus; marinus).;"
TonB-dependent receptor plug rbh
scnpilot_solids1_trim150_scaffold_389_16
Gimesia maris, Gimesia, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(22832..23830)
DNA (999bp) protein (333aa)
Uncharacterized protein n=1 Tax=Planctomyces maris DSM 8797 RepID=A6CBV6_9PLAN
Uncharacterized protein {ECO:0000313|EMBL:EDL57873.1}; TaxID=344747 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gimesia.;" source="Gimesia maris DSM 8797.;"
Kelch repeat type 1-containing protein
scnpilot_solids1_trim150_scaffold_389_17
Gimesia maris, Gimesia, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(23878..24885)
DNA (1008bp) protein (336aa)
Uncharacterized protein n=1 Tax=Planctomyces maris DSM 8797 RepID=A6CBV6_9PLAN
Uncharacterized protein {ECO:0000313|EMBL:EDL57873.1}; TaxID=344747 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gimesia.;" source="Gimesia maris DSM 8797.;"
Kelch repeat type 1-containing protein
scnpilot_solids1_trim150_scaffold_389_18
GWF2_Bacteroidetes_40_14_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24963..26168)
DNA (1206bp) protein (402aa)
Anti-FecI sigma factor, FecR n=1 Tax=Niabella soli DSM 19437 RepID=H1NQW0_9SPHI rbh
anti-FecI sigma factor FecR
Tax=GWF2_Bacteroidetes_40_14_curated
scnpilot_solids1_trim150_scaffold_389_19
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(26301..27260)
DNA (960bp) protein (320aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TGR6_NIAKG
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
scnpilot_solids1_trim150_scaffold_389_20
CG_Bacteroid_02, Bacteroidetes, Bacteria

Not on your lists

27595..29610
DNA (2016bp) protein (672aa)
hypothetical protein n=1 Tax=Flavobacterium sp. ACAM 123 RepID=UPI0002EB249F rbh
hypothetical protein; K06888 rbh
Tax=CG_Bacteroid_02
scnpilot_solids1_trim150_scaffold_389_21
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(29762..30133)
DNA (372bp) protein (124aa)
Putative uncharacterized protein n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XZU5_PEDHD
Seryl-tRNA synthetase {ECO:0000313|EMBL:ETZ20264.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_389_22
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

comp(30520..31788)
DNA (1269bp) protein (423aa)
Putative uncharacterized protein id=5029968 bin=GWA2_Bacteroidetes_32_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_32_17 organism_group=Bacteroidetes
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
scnpilot_solids1_trim150_scaffold_389_23
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(32025..33341)
DNA (1317bp) protein (439aa)
Dihydrolipoyllysine-residue succinyltransferase; K00658 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
Dihydrolipoyllysine-residue succinyltransferase {ECO:0000313|EMBL:AEW00676.1}; EC=2.3.1.61 {ECO:0000313|EMBL:AEW00676.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Dihydrolipoyllysine-residue succinyltransferase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TI59_NIAKG
scnpilot_solids1_trim150_scaffold_389_24
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(33427..34629)
DNA (1203bp) protein (401aa)
3,4-dihydroxy-2-butanone 4-phosphate synthase; K14652 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] rbh
Riboflavin biosynthesis protein RibBA n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PEE3_CHIPD rbh
Riboflavin biosynthesis protein RibBA {ECO:0000256|HAMAP-Rule:MF_01283, ECO:0000256|SAAS:SAAS00280052}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_solids1_trim150_scaffold_389_25
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(34732..36903)
DNA (2172bp) protein (724aa)
TonB-dependent receptor n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TPB5_NIAKG rbh
TonB-dependent receptor; K02014 iron complex outermembrane recepter protein rbh
TonB-dependent receptor {ECO:0000313|EMBL:AEV96721.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids1_trim150_scaffold_389_26
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

37133..37840
DNA (708bp) protein (236aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036CDE54
Uncharacterized protein {ECO:0000313|EMBL:GAO45715.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_389_27
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(37933..38784)
DNA (852bp) protein (284aa)
esterase n=1 Tax=Spirosoma panaciterrae RepID=UPI0003780C94
esterase
Putative esterase {ECO:0000313|EMBL:ADB37391.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
scnpilot_solids1_trim150_scaffold_389_28
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(38971..39171)
DNA (201bp) protein (67aa)
Excinuclease ABC C subunit domain protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TPB9_NIAKG
Excinuclease ABC C subunit domain-containing protein; K07461 putative endonuclease
Excinuclease ABC C subunit domain protein {ECO:0000313|EMBL:AEV96725.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Displaying 28 items

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