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scnpilot_solids1_trim150_scaffold_1387_1

Organism: SCNPILOT_SOLID_1_TRIM150_Sphingobacteriales_39_21

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38
Location: comp(3..299)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit alpha; K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] similarity KEGG
DB: KEGG
  • Identity: 86.3
  • Coverage: 95.0
  • Bit_score: 167
  • Evalue 1.90e-39
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2 similarity UNIPROT
DB: UniProtKB
  • Identity: 86.3
  • Coverage: 95.0
  • Bit_score: 167
  • Evalue 8.30e-39
DNA-directed RNA polymerase subunit alpha n=1 Tax=Segetibacter koreensis RepID=UPI00036A86EE similarity UNIREF
DB: UNIREF100
  • Identity: 82.8
  • Coverage: 99.0
  • Bit_score: 168
  • Evalue 4.50e-39

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Taxonomy

Chitinophaga pinensis → Chitinophaga → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 297
ATGGCCATTTTAAATTTTGTAAAACCAGACAAAATCGTTCTTCAAAAAAGCACTGACTTCGAAGCACAGTTCGAGTTTCGCCCTTTAGAGCCGGGATATGGTGTCACCATAGGAAATGCTCTTCGCAGGGTATTGCTCAATTCGCTGGAAGGGTATGCAATTATAGGTATTAATATTGCCGGCGCCGATCATGAATTTGCAACGATAAAAGGTATTACGGAAGATGTAACTGAAATCATTCTGAATCTGAAGCAGGTTCGCTTTAGAAAGAAGACTGACCAGGAAGGAGGCGTAGAA
PROTEIN sequence
Length: 99
MAILNFVKPDKIVLQKSTDFEAQFEFRPLEPGYGVTIGNALRRVLLNSLEGYAIIGINIAGADHEFATIKGITEDVTEIILNLKQVRFRKKTDQEGGVE