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scnpilot_solids1_trim150_scaffold_2037

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_2037_1
Modestobacter multiseptatus, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(64..468)
DNA (405bp) protein (135aa)
Putative Rieske (2Fe-2S) domain ferredoxin n=1 Tax=Modestobacter marinus (strain BC501) RepID=I4ES61_MODMB
rieske (2Fe-2S) domain ferredoxin
Putative Rieske (2Fe-2S) domain ferredoxin {ECO:0000313|EMBL:CCH86224.1}; TaxID=1144889 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter marinus (strain BC501).;"
scnpilot_solids1_trim150_scaffold_2037_2
Beutenbergia cavernae, Beutenbergia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

551..1315
DNA (765bp) protein (255aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5BZC2_BEUC1 rbh
short-chain dehydrogenase/reductase SDR rbh
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ACQ79094.1}; TaxID=471853 species="Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae; Beutenbergia.;" source="Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432).;"
scnpilot_solids1_trim150_scaffold_2037_3
Intrasporangium chromatireducens, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1439..2866)
DNA (1428bp) protein (476aa)
Drug resistance transporter, EmrB/QacA subfamily n=1 Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LWC1_ACIC1 rbh
MFS transporter {ECO:0000313|EMBL:EWT05725.1}; TaxID=584657 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium chromatireducens Q5-1.;"
EmrB/QacA family drug resistance transporter rbh
scnpilot_solids1_trim150_scaffold_2037_4
Amycolatopsis decaplanina, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3025..4209)
DNA (1185bp) protein (395aa)
4-hydroxybenzoate 3-monooxygenase {ECO:0000313|EMBL:EME63470.1}; EC=1.14.13.2 {ECO:0000313|EMBL:EME63470.1};; TaxID=1284240 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis decaplanina DSM 44594.;"
4-hydroxybenzoate 3-monooxygenase n=1 Tax=Amycolatopsis alba RepID=UPI00036FE3B8 rbh
pobA; p-hydroxybenzoate 3-monooxygenase rbh
scnpilot_solids1_trim150_scaffold_2037_5
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4269..5015)
DNA (747bp) protein (249aa)
Transcriptional regulator, IclR family n=1 Tax=Frankia sp. (strain EuI1c) RepID=E3J3W6_FRASU rbh
IclR family transcriptional regulator rbh
Transcriptional regulator, IclR family {ECO:0000313|EMBL:ADP80599.1}; TaxID=298654 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;"
scnpilot_solids1_trim150_scaffold_2037_6
Terrabacter sp. 28, Terrabacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5239..5934
DNA (696bp) protein (232aa)
3-oxoacid CoA-transferase subunit A (EC:2.8.3.6); K01031 3-oxoadipate CoA-transferase, alpha subunit [EC:2.8.3.6] rbh
3-oxoadipate CoA-transferase subunit A n=1 Tax=Microbacterium sp. B19 RepID=UPI00034D30EE
3-oxoadipate CoA-transferase {ECO:0000313|EMBL:KJK11088.1}; TaxID=1619947 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Terrabacter.;" source="Terrabacter sp. 28.;"
scnpilot_solids1_trim150_scaffold_2037_7
Mumia flava, Mumia, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5931..6611
DNA (681bp) protein (227aa)
3-oxoacid CoA-transferase subunit B; K01032 3-oxoadipate CoA-transferase, beta subunit [EC:2.8.3.6] rbh
3-oxoacid CoA-transferase, B subunit n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CNZ8_PSEUX rbh
3-oxoadipate CoA-transferase {ECO:0000313|EMBL:KHL12478.1}; TaxID=1348852 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Mumia.;" source="Mumia flava.;"
scnpilot_solids1_trim150_scaffold_2037_8
RIFOXYC12_FULL_Burkholderiales_65_23_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6631..7587)
DNA (957bp) protein (319aa)
hypothetical protein n=1 Tax=Sciscionella marina RepID=UPI0003713AA4
AraC family transcriptional regulator
Tax=RIFOXYC12_FULL_Burkholderiales_65_23_curated
scnpilot_solids1_trim150_scaffold_2037_9
Serratia proteamaculans, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7592..8347)
DNA (756bp) protein (252aa)
hypothetical protein n=1 Tax=Serratia sp. S4 RepID=UPI000362050C
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABV43776.1}; TaxID=399741 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia proteamaculans (strain 568).;"
scnpilot_solids1_trim150_scaffold_2037_10

Not on your lists

comp(8359..9372)
DNA (1014bp) protein (338aa)
hypothetical protein, partial n=1 Tax=Nocardiopsis alkaliphila RepID=UPI0003756071 rbh
Uncharacterized protein {ECO:0000313|EMBL:KGA13716.1}; TaxID=449393 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="freshwater metagenome.;"
putative amidohydrolase
scnpilot_solids1_trim150_scaffold_2037_11
Blastococcus saxobsidens, Blastococcus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9312..10763)
DNA (1452bp) protein (484aa)
amidase; K02433 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
Amidase {ECO:0000313|EMBL:CCG03404.1}; EC=3.5.1.4 {ECO:0000313|EMBL:CCG03404.1};; TaxID=1146883 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Blastococcus.;" source="Blastococcus saxobsidens (strain DD2).;"
hypothetical protein n=1 Tax=Nonomuraea coxensis RepID=UPI000371530E rbh
scnpilot_solids1_trim150_scaffold_2037_12
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10756..11823)
DNA (1068bp) protein (356aa)
hypothetical protein n=1 Tax=Nonomuraea coxensis RepID=UPI00035D4210 rbh
inner-membrane translocator; K01998 branched-chain amino acid transport system permease protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
scnpilot_solids1_trim150_scaffold_2037_13
Nocardioidaceae bacterium Broad-1, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11828..12694)
DNA (867bp) protein (289aa)
hypothetical protein n=1 Tax=Nonomuraea coxensis RepID=UPI000376F167 rbh
Branched-chain amino acid ABC transporter, permease protein {ECO:0000313|EMBL:EGD45002.1}; TaxID=408672 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae.;" source="Nocardioidaceae bacterium Broad-1.;"
putative branched-chain amino acid ABC transporter permease protein
scnpilot_solids1_trim150_scaffold_2037_14
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

Not on your lists

comp(12694..13434)
DNA (741bp) protein (247aa)
hypothetical protein n=1 Tax=Nonomuraea coxensis RepID=UPI000371A7AD
livF; high-affinity branched-chain amino acid ABC transporter ATP-binding protein; K01996 branched-chain amino acid transport system ATP-binding protein
Tax=CSP1_4_Chloroflexi
scnpilot_solids1_trim150_scaffold_2037_15
Burkholderia glathei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13431..14174)
DNA (744bp) protein (248aa)
hypothetical protein n=1 Tax=Nonomuraea coxensis RepID=UPI00037627B9 rbh
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KDR38550.1}; TaxID=60547 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia glathei.;"
ABC transporter ATP-binding protein; K01995 branched-chain amino acid transport system ATP-binding protein
scnpilot_solids1_trim150_scaffold_2037_16
Streptomyces turgidiscabies, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14178..15500)
DNA (1323bp) protein (441aa)
hypothetical protein n=1 Tax=Nonomuraea coxensis RepID=UPI00035CFAEC rbh
Tat pathway signal sequence domain protein {ECO:0000313|EMBL:ELP67015.1}; TaxID=698760 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces turgidiscabies Car8.;"
ABC transporter substrate-binding protein
scnpilot_solids1_trim150_scaffold_2037_17
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(15696..16967)
DNA (1272bp) protein (424aa)
hypothetical protein n=1 Tax=Actinomycetospora chiangmaiensis RepID=UPI000361E57D
MFS transporter {ECO:0000313|EMBL:EHN10867.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
major facilitator superfamily cyanate permease; K03449 MFS transporter, CP family, cyanate transporter
scnpilot_solids1_trim150_scaffold_2037_18
Arthrobacter crystallopoietes, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17222..18286
DNA (1065bp) protein (355aa)
ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein n=1 Tax=Arthrobacter crystallopoietes BAB-32 RepID=N1V1W7_9MICC rbh
ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein {ECO:0000313|EMBL:EMY32233.1}; TaxID=1246476 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter crystallopoietes BAB-32.;"
nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein rbh
scnpilot_solids1_trim150_scaffold_2037_19
Cryobacterium sp. MLB-32, Cryobacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18290..19084
DNA (795bp) protein (265aa)
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component n=1 Tax=Arthrobacter phenanthrenivorans (strain DSM 18606 / JCM 16027 / LMG 23796 / Sphe3) RepID=F0MB88_ARTPP rbh
ABC transporter permease {ECO:0000313|EMBL:KFF60578.1}; TaxID=1529318 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Cryobacterium.;" source="Cryobacterium sp. MLB-32.;"
nitrate/sulfonate/bicarbonate ABC transporter permease rbh
Displaying 19 items

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