ggKbase home page

scnpilot_solids1_trim150_scaffold_2122

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_2122_1
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2..220
DNA (219bp) protein (73aa)
betaine-aldehyde dehydrogenase (EC:1.2.1.8)
Betaine-aldehyde dehydrogenase {ECO:0000313|EMBL:ACV80823.1}; EC=1.2.1.8 {ECO:0000313|EMBL:ACV80823.1};; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
Betaine-aldehyde dehydrogenase n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8X6S5_NAKMY
scnpilot_solids1_trim150_scaffold_2122_2
Saccharomonospora viridis, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(257..571)
DNA (315bp) protein (105aa)
Branched-chain amino acid transport protein (AzlD) n=1 Tax=Saccharomonospora viridis (strain ATCC 15386 / DSM 43017 / JCM 3036 / NBRC 12207 / P101) RepID=C7MQZ2_SACVD
Branched-chain amino acid transport protein (AzlD)
Branched-chain amino acid transport protein (AzlD) {ECO:0000313|EMBL:ACU96538.1}; TaxID=471857 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora viridis (strain ATCC 15386 / DSM 43017 / JCM 3036 /; NBRC 12207 / P101).;"
scnpilot_solids1_trim150_scaffold_2122_3
Prauserella sp. Am3, Prauserella, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(568..945)
DNA (378bp) protein (126aa)
hypothetical protein n=1 Tax=Streptomyces sp. CNQ766 RepID=UPI000371CBC4
Putative branched-chain amino acid permease (Azaleucine resistance) {ECO:0000313|EMBL:KID30084.1}; TaxID=1515610 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Prauserella.;" source="Prauserella sp. Am3.;"
AzlC family protein
scnpilot_solids1_trim150_scaffold_2122_4
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1056..2810
DNA (1755bp) protein (585aa)
AAA ATPase central domain protein n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XD35_NAKMY rbh
ATPase AAA central domain-containing protein; K07478 putative ATPase rbh
AAA ATPase central domain protein {ECO:0000313|EMBL:ACV79638.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids1_trim150_scaffold_2122_5
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2814..3989
DNA (1176bp) protein (392aa)
Major facilitator superfamily MFS_1 n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XF03_NAKMY rbh
major facilitator superfamily protein rbh
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ACV77889.1}; Flags: Precursor;; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids1_trim150_scaffold_2122_6
Cellulomonas flavigena, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4041..5786)
DNA (1746bp) protein (582aa)
alpha amylase; K01187 alpha-glucosidase [EC:3.2.1.20] rbh
Alpha amylase catalytic region n=1 Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5UG45_CELFN rbh
Alpha amylase catalytic region {ECO:0000313|EMBL:ADG75068.1}; TaxID=446466 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS; 134).;"
scnpilot_solids1_trim150_scaffold_2122_7
Tetrasphaera japonica, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5882..6586
DNA (705bp) protein (235aa)
hypothetical protein n=1 Tax=Humibacter albus RepID=UPI0003B59552
Uncharacterized protein {ECO:0000313|EMBL:CCH78587.1}; TaxID=1194083 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera japonica T1-X7.;"
scnpilot_solids1_trim150_scaffold_2122_8
unknown

Not on your lists

6583..6783
DNA (201bp) protein (67aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_2122_9
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6845..9817)
DNA (2973bp) protein (991aa)
FAD linked oxidase domain protein n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) RepID=B8JDW9_ANAD2 rbh
FAD linked oxidase domain-containing protein; K06911 rbh
FAD linked oxidase domain protein {ECO:0000313|EMBL:ACL64214.1}; TaxID=455488 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258).;"
scnpilot_solids1_trim150_scaffold_2122_10
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


10460..13129
DNA (2670bp) protein (890aa)
Alanine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015689}; EC=6.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015673};; Alanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00036}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
alaS; alanyl-tRNA synthetase (EC:6.1.1.7); K01872 alanyl-tRNA synthetase [EC:6.1.1.7] rbh
Alanine--tRNA ligase n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XD24_NAKMY rbh
scnpilot_solids1_trim150_scaffold_2122_11
Knoellia aerolata, Knoellia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13143..13619
DNA (477bp) protein (159aa)
Putative Holliday junction resolvase {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086483}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086510};; TaxID=1385519 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia aerolata DSM 18566.;"
Holliday junction resolvase YqgF; K07447 putative holliday junction resolvase [EC:3.1.-.-]
Holliday junction resolvase n=1 Tax=Amycolatopsis RepID=UPI0002629010
scnpilot_solids1_trim150_scaffold_2122_12
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13612..15087
DNA (1476bp) protein (492aa)
Aminodeoxychorismate lyase n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XD22_NAKMY rbh
aminodeoxychorismate lyase; K07082 UPF0755 protein rbh
Aminodeoxychorismate lyase {ECO:0000313|EMBL:ACV79625.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids1_trim150_scaffold_2122_13
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15232..15882
DNA (651bp) protein (217aa)
shikimate-5-dehydrogenase; K00014 shikimate dehydrogenase [EC:1.1.1.25]
Shikimate-5-dehydrogenase n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XD21_NAKMY
Shikimate-5-dehydrogenase {ECO:0000313|EMBL:ACV79624.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids1_trim150_scaffold_2122_14
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15958..17967
DNA (2010bp) protein (670aa)
Chromosome partition protein Smc n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XH72_NAKMY
chromosome segregation protein SMC; K03529 chromosome segregation protein
Chromosome partition protein Smc {ECO:0000256|HAMAP-Rule:MF_01894}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids1_trim150_scaffold_2122_15
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17954..19462
DNA (1509bp) protein (503aa)
Chromosome partition protein Smc n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XH72_NAKMY
chromosome segregation protein SMC; K03529 chromosome segregation protein
Chromosome partition protein Smc {ECO:0000256|HAMAP-Rule:MF_01894}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids1_trim150_scaffold_2122_16
Rhodococcus triatomae, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19733..20578
DNA (846bp) protein (282aa)
Succinate dehydrogenase membrane subunit sdhd1 n=1 Tax=Rhodococcus triatomae BKS 15-14 RepID=M2WVX3_9NOCA
Succinate dehydrogenase membrane subunit sdhd1 {ECO:0000313|EMBL:EME21767.1}; TaxID=1278078 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus triatomae BKS 15-14.;"
integral membrane protein
scnpilot_solids1_trim150_scaffold_2122_17
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20610..22586
DNA (1977bp) protein (659aa)
sdhA; succinate dehydrogenase flavoprotein subunit (EC:1.3.5.1); K00239 succinate dehydrogenase flavoprotein subunit [EC:1.3.99.1] rbh
Succinate dehydrogenase, flavoprotein subunit n=1 Tax=Micromonospora lupini str. Lupac 08 RepID=I0LBN1_9ACTO rbh
Succinate dehydrogenase, flavoprotein subunit {ECO:0000313|EMBL:CCH21228.1}; TaxID=1150864 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupac 08.;"
scnpilot_solids1_trim150_scaffold_2122_18
Amycolatopsis rifamycinica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22590..23357
DNA (768bp) protein (256aa)
sdhB; succinate dehydrogenase iron-sulfur protein; K00240 succinate dehydrogenase iron-sulfur subunit [EC:1.3.99.1] rbh
fumarate reductase n=1 Tax=Mycobacterium avium RepID=UPI0002DC0FC1 rbh
Fumarate reductase {ECO:0000313|EMBL:KDN19863.1}; TaxID=287986 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis rifamycinica.;"
scnpilot_solids1_trim150_scaffold_2122_19
unknown

Not on your lists

23718..23897
DNA (180bp) protein (60aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_2122_20
Knoellia aerolata, Knoellia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24061..24837
DNA (777bp) protein (259aa)
Uncharacterized protein {ECO:0000313|EMBL:KGN40434.1}; TaxID=1385519 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia aerolata DSM 18566.;"
scnpilot_solids1_trim150_scaffold_2122_21
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24913..25356)
DNA (444bp) protein (148aa)
glutamine synthetase; K01915 glutamine synthetase [EC:6.3.1.2]
Glutamine synthetase {ECO:0000256|RuleBase:RU004356}; EC=6.3.1.2 {ECO:0000256|RuleBase:RU004356};; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
Glutamine synthetase n=1 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2SAU0_GEOOG
Displaying 21 items

View Taxonomy