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scnpilot_solids1_trim150_scaffold_737

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_737_1
Rhodococcus erythropolis, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3..1181)
DNA (1179bp) protein (393aa)
dehydrogenase, E1 component; K11381 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4] rbh
Transketolase, C-terminal domain protein n=1 Tax=Rhodococcus erythropolis SK121 RepID=C3JP80_RHOER rbh
Transketolase, C-terminal domain protein {ECO:0000313|EMBL:EEN86690.1}; TaxID=596309 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus erythropolis SK121.;"
scnpilot_solids1_trim150_scaffold_737_2
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1504..2046
DNA (543bp) protein (181aa)
hypothetical protein n=1 Tax=Actinoplanes globisporus RepID=UPI00036E79D7
Mll5435 protein {ECO:0000313|EMBL:CEL13346.1}; TaxID=703222 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-NF4.;"
glyoxalase/bleomycin resistance protein/dioxygenase; K08234 glyoxylase I family protein
scnpilot_solids1_trim150_scaffold_737_3
Actinotalea ferrariae, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2160..3023
DNA (864bp) protein (288aa)
ABC transporter permease {ECO:0000313|EMBL:EYR64100.1}; TaxID=948458 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea ferrariae CF5-4.;"
Inner-membrane translocator id=2355477 bin=GWA2_Methylomirabilis_73_35 species=beta proteobacterium CB genus=unknown taxon_order=unknown taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
amino acid/amide ABC transporter membrane protein 1, HAAT family
scnpilot_solids1_trim150_scaffold_737_4
Actinotalea ferrariae, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3020..4120
DNA (1101bp) protein (367aa)
hypothetical protein n=1 Tax=Thiomonas sp. FB-6 RepID=UPI00037E2F6F
ABC transporter permease {ECO:0000313|EMBL:EYR64099.1}; TaxID=948458 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea ferrariae CF5-4.;"
Inner-membrane translocator
scnpilot_solids1_trim150_scaffold_737_5
Actinotalea ferrariae, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4120..5517
DNA (1398bp) protein (466aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI00031CFF3E
Uncharacterized protein {ECO:0000313|EMBL:EYR64106.1}; TaxID=948458 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea ferrariae CF5-4.;"
amino acid/amide ABC transporter substrate-binding protein, HAAT family
scnpilot_solids1_trim150_scaffold_737_6
Actinotalea ferrariae, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5520..6311
DNA (792bp) protein (264aa)
ABC transporter, ATP-binding protein n=1 Tax=Modestobacter marinus (strain BC501) RepID=I4EWM3_MODMB
ABC transporter permease {ECO:0000313|EMBL:EYR64098.1}; TaxID=948458 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea ferrariae CF5-4.;"
ABC transporter ATP-binding protein
scnpilot_solids1_trim150_scaffold_737_7
Actinotalea ferrariae, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6358..7023
DNA (666bp) protein (222aa)
Branched-chain amino acid ABC transporter ATPase n=1 Tax=Pandoraea sp. SD6-2 RepID=R7X320_9BURK
ABC transporter ATP-binding protein {ECO:0000313|EMBL:EYR64097.1}; TaxID=948458 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea ferrariae CF5-4.;"
ABC transporter-like protein; K01996 branched-chain amino acid transport system ATP-binding protein
scnpilot_solids1_trim150_scaffold_737_8
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7739..8284
DNA (546bp) protein (182aa)
cytosine deaminase or related metal-dependent hydrolase (EC:3.5.4.-)
Cytosine deaminase or related metal-dependent hydrolase n=1 Tax=Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) RepID=Q0K444_CUPNH
Micromonospora carbonacea strain JXNU-1 contig3, whole genome shotgun sequence {ECO:0000313|EMBL:KIR62050.1}; TaxID=47853 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora carbonacea.;"
scnpilot_solids1_trim150_scaffold_737_9
Rhodococcus qingshengii, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8372..9043
DNA (672bp) protein (224aa)
Transcriptional regulator, GntR family n=2 Tax=Rhodococcus RepID=C3JP82_RHOER
GntR family transcriptional regulator {ECO:0000313|EMBL:EME14928.1}; TaxID=1278077 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus qingshengii BKS 20-40.;"
GntR family transcriptional regulator
scnpilot_solids1_trim150_scaffold_737_10
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9070..10305)
DNA (1236bp) protein (412aa)
Peptidase M24 n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SQ86_NOCSJ rbh
peptidase M24 rbh
Peptidase M24 {ECO:0000313|EMBL:ABL83971.1}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
scnpilot_solids1_trim150_scaffold_737_11
Candidatus Aquiluna sp. IMCC13023, Candidatus Aquiluna, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10302..11234)
DNA (933bp) protein (311aa)
6-phosphogluconate dehydrogenase, NAD-binding n=1 Tax=Candidatus Aquiluna sp. IMCC13023 RepID=I0QZZ8_9MICO rbh
6-phosphogluconate dehydrogenase, NAD-binding {ECO:0000313|EMBL:EIC91184.1}; TaxID=1081644 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Luna cluster; Luna-1 subcluster; Candidatus Aquiluna.;" source="Candidatus Aquiluna sp. IMCC13023.;"
6-phosphogluconate dehydrogenase
scnpilot_solids1_trim150_scaffold_737_12
Rhizobium sp. CF080, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11392..12585)
DNA (1194bp) protein (398aa)
FAD-dependent oxidoreductase n=1 Tax=Nocardiopsis synnemataformans RepID=UPI0003676932
Uncharacterized protein {ECO:0000313|EMBL:EUB98612.1}; TaxID=1144310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF080.;"
FAD dependent oxidoreductase; K07222 putative flavoprotein involved in K+ transport
scnpilot_solids1_trim150_scaffold_737_13
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12678..13025)
DNA (348bp) protein (116aa)
Cupin 2, conserved barrel domain protein n=1 Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LT97_ACIC1
cupin
Cupin 2, conserved barrel domain protein {ECO:0000313|EMBL:ABK52657.1}; TaxID=351607 species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulolyticus (strain ATCC 43068 / 11B).;"
scnpilot_solids1_trim150_scaffold_737_14
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13153..13911)
DNA (759bp) protein (253aa)
hypothetical protein n=1 Tax=Actinoplanes globisporus RepID=UPI0003620945
FAD dependent oxidoreductase
FAD dependent oxidoreductase {ECO:0000313|EMBL:ABL83941.1}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
scnpilot_solids1_trim150_scaffold_737_15
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14814..16091
DNA (1278bp) protein (426aa)
hypothetical protein n=1 Tax=Glaciibacter superstes RepID=UPI0003B75854 rbh
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
scnpilot_solids1_trim150_scaffold_737_16
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16130..17302)
DNA (1173bp) protein (391aa)
peptidase M24; K01262 Xaa-Pro aminopeptidase [EC:3.4.11.9]
peptidase M24 id=14631820 bin=bin9_gal15 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=bin9_gal15 organism_group=GAL15
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
scnpilot_solids1_trim150_scaffold_737_17
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

17438..18937
DNA (1500bp) protein (500aa)
glutamyl-tRNA(Gln) amidotransferase subunit A (EC:6.3.5.-); K02433 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
Amidase id=4599606 bin=GWC2_Methylomirabilis_70_16 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 rbh
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
scnpilot_solids1_trim150_scaffold_737_18
Jonquetella anthropi, Jonquetella, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

18934..20094
DNA (1161bp) protein (387aa)
Endoribonuclease L-PSP, putative n=3 Tax=Jonquetella RepID=H0UIU8_9BACT
Putative endoribonuclease L-PSP {ECO:0000313|EMBL:EEX48971.1}; TaxID=645512 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Jonquetella.;" source="Jonquetella anthropi E3_33 E1.;"
endoribonuclease L-PSP; K07567 TdcF protein
scnpilot_solids1_trim150_scaffold_737_19
Streptomyces auratus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20104..20859)
DNA (756bp) protein (252aa)
hypothetical protein n=1 Tax=Streptomyces sp. HmicA12 RepID=UPI000381D056
Uncharacterized protein {ECO:0000313|EMBL:EJJ04350.1}; TaxID=1160718 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces auratus AGR0001.;"
hypothetical protein; K07090
scnpilot_solids1_trim150_scaffold_737_20
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20902..23046)
DNA (2145bp) protein (715aa)
Aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding protein n=1 Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LTB0_ACIC1 rbh
molybdopterin binding aldehyde oxidase and xanthine dehydrogenase rbh
Aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding protein {ECO:0000313|EMBL:ABK52670.1}; TaxID=351607 species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulolyticus (strain ATCC 43068 / 11B).;"
scnpilot_solids1_trim150_scaffold_737_21
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23043..23510)
DNA (468bp) protein (156aa)
(2Fe-2S)-binding domain protein n=1 Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LTA9_ACIC1
Isoquinoline 1-oxidoreductase {ECO:0000313|EMBL:EWM12579.1}; TaxID=345341 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
2Fe-2S iron-sulfur cluster binding domain-containing protein
scnpilot_solids1_trim150_scaffold_737_22
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23564..24496)
DNA (933bp) protein (311aa)
6-phosphogluconate dehydrogenase, NAD-binding protein n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SQ87_NOCSJ rbh
6-phosphogluconate dehydrogenase rbh
6-phosphogluconate dehydrogenase, NAD-binding protein {ECO:0000313|EMBL:ABL83972.1}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
scnpilot_solids1_trim150_scaffold_737_23
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24577..25635)
DNA (1059bp) protein (353aa)
Amino acid ABC transporter permease protein n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2IYM2_POLGS rbh
amino acid ABC transporter permease; K01998 branched-chain amino acid transport system permease protein rbh
Amino acid ABC transporter permease protein {ECO:0000313|EMBL:ADZ69469.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
scnpilot_solids1_trim150_scaffold_737_24
RBG_16_Chloroflexi_48_8_curated, Chloroflexi, Bacteria

Not on your lists

comp(25632..26507)
DNA (876bp) protein (292aa)
Amino acid ABC transporter permease protein n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2IYM3_POLGS
amino acid ABC transporter permease; K01997 branched-chain amino acid transport system permease protein
Tax=RBG_16_Chloroflexi_48_8_curated
scnpilot_solids1_trim150_scaffold_737_25
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26504..27244)
DNA (741bp) protein (247aa)
High-affinity branched-chain amino acid transport ATP-binding protein BraG n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CZI4_9RHIZ
High-affinity branched-chain amino acid transport ATP-binding protein BraG {ECO:0000313|EMBL:EYR77426.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
branched-chain amino acid transport ATP-binding protein LivF; K01996 branched-chain amino acid transport system ATP-binding protein
scnpilot_solids1_trim150_scaffold_737_26
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27241..28047)
DNA (807bp) protein (269aa)
ABC-type branched-chain amino acid transport systems, ATPase component n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2IYM5_POLGS
branched-chain amino acid ABC transporter ATPase; K01995 branched-chain amino acid transport system ATP-binding protein
ABC-type branched-chain amino acid transport systems, ATPase component {ECO:0000313|EMBL:ADZ69472.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
scnpilot_solids1_trim150_scaffold_737_27
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28044..28481)
DNA (438bp) protein (146aa)
hypothetical protein n=1 Tax=Amorphus coralli RepID=UPI00036506AA
endoribonuclease L-PSP; K07567 TdcF protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
scnpilot_solids1_trim150_scaffold_737_28
RBG_16_Chloroflexi_48_8_curated, Chloroflexi, Bacteria

Not on your lists

comp(28581..29954)
DNA (1374bp) protein (458aa)
ABC-type branched-chain amino acid transporter periplasmic amino acid-binding protein n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2IYM6_POLGS rbh
branched-chain amino acid ABC transporter substrate-binding protein; K01999 branched-chain amino acid transport system substrate-binding protein rbh
Tax=RBG_16_Chloroflexi_48_8_curated
scnpilot_solids1_trim150_scaffold_737_29
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30327..31403
DNA (1077bp) protein (359aa)
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase n=1 Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LT96_ACIC1 rbh
nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase rbh
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase {ECO:0000313|EMBL:ABK52656.1}; TaxID=351607 species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulolyticus (strain ATCC 43068 / 11B).;"
scnpilot_solids1_trim150_scaffold_737_30
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31414..32406)
DNA (993bp) protein (331aa)
Transcriptional regulator, LacI family n=1 Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LTA5_ACIC1 rbh
LacI family transcriptional regulator; K02529 LacI family transcriptional regulator rbh
Transcriptional regulator, LacI family {ECO:0000313|EMBL:ABK52665.1}; TaxID=351607 species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulolyticus (strain ATCC 43068 / 11B).;"
Displaying items 1-30 of 35 in total

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