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scnpilot_solids1_trim150_scaffold_941

Search features with annotation key words

Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_941_1
Cellulomonas bogoriensis, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2..475
DNA (474bp) protein (158aa)
thioredoxin reductase (EC:1.8.1.9); K00384 thioredoxin reductase (NADPH) [EC:1.8.1.9]
Thioredoxin reductase {ECO:0000256|RuleBase:RU003881}; EC=1.8.1.9 {ECO:0000256|RuleBase:RU003881};; TaxID=1386082 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas bogoriensis 69B4 = DSM 16987.;"
Thioredoxin reductase n=1 Tax=Isoptericola variabilis (strain 225) RepID=F6FWP7_ISOV2
scnpilot_solids1_trim150_scaffold_941_2
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

534..857
DNA (324bp) protein (108aa)
thioredoxin n=1 Tax=Actinomycetospora chiangmaiensis RepID=UPI0003758501
thioredoxin; K03671 thioredoxin 1
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids1_trim150_scaffold_941_3
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1067..2215
DNA (1149bp) protein (383aa)
cell wall hydrolase/autolysin; K01448 N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] rbh
Cell wall hydrolase/autolysin n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XE82_NAKMY rbh
Cell wall hydrolase/autolysin {ECO:0000313|EMBL:ACV81666.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids1_trim150_scaffold_941_4
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2212..3510
DNA (1299bp) protein (433aa)
Putative transcriptional regulator, GntR family n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XE84_NAKMY rbh
GntR family transcriptional regulator rbh
Putative transcriptional regulator, GntR family {ECO:0000313|EMBL:ACV81668.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids1_trim150_scaffold_941_5
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3547..4497
DNA (951bp) protein (317aa)
D-alanine--D-alanine ligase (EC:6.3.2.4); K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] rbh
D-alanine--D-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732}; EC=6.3.2.4 {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732};; D-Ala-D-Ala ligase {ECO:0000256|HAMAP-Rule:MF_00047}; D-alanylalanine synthetase {ECO:0000256|HAMAP-Rule:MF_00047}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
D-alanine--D-alanine ligase n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XE85_NAKMY rbh
scnpilot_solids1_trim150_scaffold_941_6
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4633..5595)
DNA (963bp) protein (321aa)
Putative transcriptional regulator n=1 Tax=Saccharomonospora glauca K62 RepID=I1D8D4_9PSEU rbh
Chromosome partitioning protein ParB {ECO:0000313|EMBL:EWM14856.1}; TaxID=345341 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
putative transcriptional regulators rbh
scnpilot_solids1_trim150_scaffold_941_7
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5595..6455)
DNA (861bp) protein (287aa)
Cobyrinic acid ac-diamide synthase n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XE87_NAKMY rbh
cobyrinic acid ac-diamide synthase; K03496 chromosome partitioning protein rbh
Cobyrinic acid ac-diamide synthase {ECO:0000313|EMBL:ACV81671.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids1_trim150_scaffold_941_8
unknown

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6525..7424
DNA (900bp) protein (300aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_941_9
Knoellia subterranea, Knoellia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7352..7981)
DNA (630bp) protein (210aa)
Uncharacterized protein n=1 Tax=Bacillus sp. EGD-AK10 RepID=U2AHB1_9BACI
Acetyltransferase {ECO:0000313|EMBL:KGN38072.1}; TaxID=1385521 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia subterranea KCTC 19937.;"
GCN5-related N-acetyltransferase
scnpilot_solids1_trim150_scaffold_941_10
Streptomyces roseochromogenus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7978..8625)
DNA (648bp) protein (216aa)
Uncharacterized protein n=1 Tax=Streptomyces roseochromogenes subsp. oscitans DS 12.976 RepID=V6KS67_STRRC
Uncharacterized protein {ECO:0000313|EMBL:EST34863.1}; TaxID=1352936 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces roseochromogenus subsp. oscitans DS 12.976.;"
methyltransferase
scnpilot_solids1_trim150_scaffold_941_11
Modestobacter multiseptatus, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9004..9318)
DNA (315bp) protein (105aa)
rsmG; ribosomal RNA small subunit methyltransferase G (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase G {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00095882}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00277524};; 16S rRNA 7-methylguanosine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00074}; TaxID=1144889 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter marinus (strain BC501).;"
16S rRNA methyltransferase n=1 Tax=Actinomadura flavalba RepID=UPI0003808F8A
scnpilot_solids1_trim150_scaffold_941_12
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9320..9868)
DNA (549bp) protein (183aa)
Single-stranded nucleic acid binding R3H domain protein n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XE90_NAKMY
single-stranded nucleic acid binding R3H domain-containing protein; K06346 spoIIIJ-associated protein
Single-stranded nucleic acid binding R3H domain protein {ECO:0000313|EMBL:ACV81674.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids1_trim150_scaffold_941_13
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9937..11142)
DNA (1206bp) protein (402aa)
60 kDa inner membrane insertion protein n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XE91_NAKMY rbh
hypothetical protein; K03217 preprotein translocase subunit YidC rbh
60 kDa inner membrane insertion protein {ECO:0000313|EMBL:ACV81675.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids1_trim150_scaffold_941_14
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11139..11597)
DNA (459bp) protein (153aa)
Putative membrane protein insertion efficiency factor n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XE92_NAKMY
hypothetical protein; K08998 hypothetical protein
Putative membrane protein insertion efficiency factor {ECO:0000256|HAMAP-Rule:MF_00386, ECO:0000256|SAAS:SAAS00100919}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids1_trim150_scaffold_941_15
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11594..11944)
DNA (351bp) protein (117aa)
Ribonuclease P protein component {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143752}; Short=RNase P protein {ECO:0000256|HAMAP-Rule:MF_00227};; Short=RNaseP protein {ECO:0000256|HAMAP-Rule:MF_00227};; EC=3.1.26.5 {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143815};; Protein C5 {ECO:0000256|HAMAP-Rule:MF_00227}; TaxID=909613 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongiae.;"
ribonuclease P protein component; K03536 ribonuclease P protein component [EC:3.1.26.5]
Ribonuclease P protein component n=1 Tax=Saccharomonospora paurometabolica YIM 90007 RepID=G4IXW7_9PSEU
scnpilot_solids1_trim150_scaffold_941_16
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12644..14149
DNA (1506bp) protein (502aa)
chromosomal replication initiation protein n=1 Tax=Amycolatopsis methanolica RepID=UPI0003728035 rbh
Chromosomal replication initiator protein DnaA {ECO:0000256|HAMAP-Rule:MF_00377}; TaxID=345341 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
Chromosomal replication initiator protein rbh
scnpilot_solids1_trim150_scaffold_941_17

Not on your lists

14685..15800
DNA (1116bp) protein (372aa)
DNA polymerase III subunit beta (EC:2.7.7.7); K02338 DNA polymerase III subunit beta [EC:2.7.7.7] rbh
Smu19B (Fragment) n=1 Tax=uncultured organism RepID=Q0GNI3_9ZZZZ rbh
Smu19B {ECO:0000313|EMBL:ABI21619.1}; Flags: Fragment;; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
scnpilot_solids1_trim150_scaffold_941_18
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15890..16795
DNA (906bp) protein (302aa)
6-phosphogluconate dehydrogenase; K00033 6-phosphogluconate dehydrogenase [EC:1.1.1.44] rbh
6-phosphogluconate dehydrogenase, decarboxylating n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XHV0_NAKMY rbh
6-phosphogluconate dehydrogenase, decarboxylating {ECO:0000313|EMBL:ACV76441.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids1_trim150_scaffold_941_19
Saccharopolyspora erythraea, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16916..18073
DNA (1158bp) protein (386aa)
DNA replication and repair protein RecF n=1 Tax=Saccharopolyspora erythraea (strain NRRL 23338) RepID=RECF_SACEN rbh
DNA replication and repair protein RecF; K03629 DNA replication and repair protein RecF rbh
DNA replication and repair protein RecF {ECO:0000255|HAMAP-Rule:MF_00365}; TaxID=405948 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora erythraea (strain NRRL 23338).;"
scnpilot_solids1_trim150_scaffold_941_20
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18070..18693
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XHV2_NAKMY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV76443.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids1_trim150_scaffold_941_21
Corynebacterium glyciniphilum, Corynebacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19155..21311
DNA (2157bp) protein (719aa)
DNA gyrase subunit B {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363};; TaxID=1404245 species="Bacteria; Actinobacteria; Corynebacteriales; Corynebacteriaceae; Corynebacterium.;" source="Corynebacterium glyciniphilum AJ 3170.;"
DNA gyrase subunit B; K02470 DNA gyrase subunit B [EC:5.99.1.3] rbh
DNA gyrase subunit B n=1 Tax=Gordonia kroppenstedtii RepID=UPI00036B2F4D rbh
scnpilot_solids1_trim150_scaffold_941_22
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


21427..23961
DNA (2535bp) protein (845aa)
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
DNA gyrase subunit A (EC:5.99.1.3); K02469 DNA gyrase subunit A [EC:5.99.1.3] rbh
DNA gyrase subunit A n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XHV5_NAKMY rbh
scnpilot_solids1_trim150_scaffold_941_23
Saccharomonospora azurea, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23958..24545
DNA (588bp) protein (196aa)
Uncharacterized protein n=1 Tax=Saccharomonospora azurea NA-128 RepID=H8GB14_9PSEU
Uncharacterized protein {ECO:0000313|EMBL:EHY89670.1}; TaxID=882081 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora azurea NA-128.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_941_trna_1
unknown

Not on your lists

24661..24734
DNA (74bp)
transferRNA Ile
scnpilot_solids1_trim150_scaffold_941_24
unknown

Not on your lists

24872..24997
DNA (126bp) protein (42aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_941_trna_2
unknown

Not on your lists

25036..25108
DNA (73bp)
transferRNA Ala
scnpilot_solids1_trim150_scaffold_941_25
Rhodococcus wratislaviensis, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25348..26358
DNA (1011bp) protein (337aa)
NAD-dependent epimerase/dehydratase family protein; K00091 dihydroflavonol-4-reductase [EC:1.1.1.219] rbh
Reductase n=1 Tax=Rhodococcus opacus M213 RepID=K8XM67_RHOOP rbh
NAD-dependent epimerase/dehydratase family protein {ECO:0000313|EMBL:GAF49588.1}; TaxID=1219028 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus wratislaviensis NBRC 100605.;"
scnpilot_solids1_trim150_scaffold_941_26
Tetrasphaera australiensis, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26377..27069)
DNA (693bp) protein (231aa)
Two-component system response regulator n=1 Tax=Nocardioidaceae bacterium Broad-1 RepID=E9UTC2_9ACTO
Two-component response regulator (YvqE) responding to cell wall stress {ECO:0000313|EMBL:CCH75641.1}; TaxID=1193182 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera australiensis Ben110.;"
LuxR family two component transcriptional regulator
scnpilot_solids1_trim150_scaffold_941_27
Leucobacter komagatae, Leucobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27066..28238)
DNA (1173bp) protein (391aa)
signal transduction histidine kinase (EC:2.7.13.3)
histidine kinase n=1 Tax=Leucobacter chromiiresistens RepID=UPI000262A982
Leucobacter komagatae strain VKM ST2845 L_komagatae_09, whole genome shotgun sequence {ECO:0000313|EMBL:KIP52536.1}; Flags: Fragment;; TaxID=55969 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leucobacter.;" source="Leucobacter komagatae.;"
scnpilot_solids1_trim150_scaffold_941_28
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28207..30363)
DNA (2157bp) protein (719aa)
hypothetical protein n=1 Tax=Leucobacter salsicius RepID=UPI000347BDE5
Membrane protein {ECO:0000313|EMBL:KDA05160.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
hypothetical protein; K06994 putative drug exporter of the RND superfamily
Displaying items 1-30 of 42 in total

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