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scnpilot_solids1_trim150_scaffold_403_2

Organism: SCNPILOT_SOLID_1_TRIM150_Actinobacteria_69_91

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 ASCG 13 / 38 MC: 1
Location: comp(140..655)

Top 3 Functional Annotations

Value Algorithm Source
Ribosome maturation factor RimM n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XBW3_NAKMY similarity UNIREF
DB: UNIREF100
  • Identity: 64.9
  • Coverage: 168.0
  • Bit_score: 212
  • Evalue 3.70e-52
16S rRNA processing protein RimM; K02860 16S rRNA processing protein RimM similarity KEGG
DB: KEGG
  • Identity: 64.9
  • Coverage: 168.0
  • Bit_score: 212
  • Evalue 1.10e-52
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.9
  • Coverage: 168.0
  • Bit_score: 212
  • Evalue 5.10e-52

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Taxonomy

Nakamurella multipartita → Nakamurella → Nakamurellales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 516
ATGCTCGTTGCCGTCGGCCGGATCGGGCGTCCACACGGGATCAGAGGTGACGTCACCGTCGAGGTGCTCACCGACGATCCGGACGTCCGGTTCGCCCCCGGCAGCGCACTGGTCACCGATCCGCCGGACATCGGCCCGCTGACCGTCACCGGATCCGGGCGTAGCGGTGCCGTGACCACGCTGCACTTCGAGGGCGTCGACGACCGCGACGCCGCCGAGACGCTGCGCGGCACGGTGCTACAGGTCGATACCGCCGATCTGCCGGACCTCACCGACGGGGACGACTTCTACGACCACCAGCTCATCGGCCTCGCCGCCGTGGATCCGTCCGGCGCCGTCCTGGGCACGGTCACCGCCATCCTGCACGCGCCGGCCGCGCCGGTGCTCACCGTCGCGCGCCCGGACGGCGGCGACGAGCTGGTGCCGTTCGTCTCGGCGATCGTCACCGAGGTCGACCTGGCCGCAGGGCGCCTGACCATCGATCCGCCGGACGGCATGTTCGCCCCGCAGTCGTGA
PROTEIN sequence
Length: 172
MLVAVGRIGRPHGIRGDVTVEVLTDDPDVRFAPGSALVTDPPDIGPLTVTGSGRSGAVTTLHFEGVDDRDAAETLRGTVLQVDTADLPDLTDGDDFYDHQLIGLAAVDPSGAVLGTVTAILHAPAAPVLTVARPDGGDELVPFVSAIVTEVDLAAGRLTIDPPDGMFAPQS*