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scnpilot_solids1_trim150_scaffold_608_11

Organism: SCNPILOT_SOLID_1_TRIM150_Actinobacteria_69_91

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 ASCG 13 / 38 MC: 1
Location: comp(11150..12499)

Top 3 Functional Annotations

Value Algorithm Source
Receptor family ligand-binding protein n=4 Tax=Clostridium RepID=E9SJF5_CLOSY similarity UNIREF
DB: UNIREF100
  • Identity: 41.3
  • Coverage: 407.0
  • Bit_score: 288
  • Evalue 1.40e-74
Uncharacterized protein {ECO:0000313|EMBL:EGA95822.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 41.3
  • Coverage: 407.0
  • Bit_score: 288
  • Evalue 1.90e-74
extracellular ligand-binding receptor; K01999 branched-chain amino acid transport system substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 41.5
  • Coverage: 349.0
  • Bit_score: 257
  • Evalue 1.10e-65

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Taxonomy

[Clostridium] symbiosum → Lachnoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1350
ATGAAGCGCACACCTATGGGCCGGATCACCGCGGCCGCGGCCGTGGCATTGATGGGCATCGGCCTGGCCGCCTGCTCGTCGGCATCGACGGACACCGGGACCAGCACCACGGGATCGAGCGACCAGGGCCAGAGCAGTGCAGCGTCGGCCGGCTCCGGCTCGAGCGACAGTTCCGCCGCTGAGTCCGGCGACACCATCAAGATCGGGTTCTTCTCCCCGCAGTCGGGATTCGCCGCATCGGACGGCAAGTCCGCCCTGGACGCTGCGAACCTCGCCGTGAAGCACATCAACGCGGGTGGCGGCATGAACGGCGCGAGTATCCAGCTCGTCCCCTACGACGACGGCTCCGACGCGAAGCAAGCCGTGTCCATCGCCACGAAACTCACCACCCAGGACAACGTCTCGGCCGTGGTCTCGGGCTCCTACAGTGACCAGACACTGGCCGCCGCGTCCATCTTCCAGCGTGCCGGCATCCCGATGACGGCCGCCTACGCCGTGAATCCCGGTATCCCGGCGACCGGCGACGGCATGTTCCAGATCGCCACCTCCGGCACCGTCGAGGGCCGCGCCGGGGCGGTCGCGCTCATCGACAAACTCGGCGTGAAGAAGGTCGCCATCATCGCTATCGACAACGACTTCGGCAACGCGCTGATCGACGGGTTCAAGCAGGAGGCGGACAAGCTCGGCGCCACCATCGTCTCCACCGACAAGAACCAGTTCGGCGAGAAGGACTTCGGTCCGGTCATCGACAAGGGCATCGCGGCCGGCGCGGAGGGCTTCTACATCCCGCAGTACTCCGCTGAGGCGCAGCAGTTCCTCACCGCCTACCGGCAGCGCAACCTGACCCAGCCGATCGTCGGCACCGAGGGCATCGACTCGACATTGCAGTTCATCGAACCGAACGCGAAGCTCGCGGACGGCATGGTGTTCACCACGGTGCTCAACCGGGACAGCACGGACCCGGCCACCAAGAAGTTCCTGACCGACTTCCAGGACGCCTACGGGCACGCACCGGACATGGTCGCCGCGACCACATATGACGCCGTGATGGTGCTGAAGGCCGCTGCCGACAACGAGAAATCGACCGACGCGGCCGCCCTGAAGAAGGGCATCACCGACCTGACGAACTACCCCGGCGCCGCGGGCACGATCGAGAAGTTCGTCGACCGCGTGTCCATCCACCCGGTCGAGCTGGAGGTGTTCAAGGACGGCGGCGTTGGAGGTGTTCAAGGACGGCGGCGTGCACCACTACGCGACCGTGGACGACCCCGCGATCATCACGCCATGACGAGGCGGCCGGCCCGGTATCGGGTATGGCGCTGTATCGGATATGACGAGCATCTGACGTGA
PROTEIN sequence
Length: 450
MKRTPMGRITAAAAVALMGIGLAACSSASTDTGTSTTGSSDQGQSSAASAGSGSSDSSAAESGDTIKIGFFSPQSGFAASDGKSALDAANLAVKHINAGGGMNGASIQLVPYDDGSDAKQAVSIATKLTTQDNVSAVVSGSYSDQTLAAASIFQRAGIPMTAAYAVNPGIPATGDGMFQIATSGTVEGRAGAVALIDKLGVKKVAIIAIDNDFGNALIDGFKQEADKLGATIVSTDKNQFGEKDFGPVIDKGIAAGAEGFYIPQYSAEAQQFLTAYRQRNLTQPIVGTEGIDSTLQFIEPNAKLADGMVFTTVLNRDSTDPATKKFLTDFQDAYGHAPDMVAATTYDAVMVLKAAADNEKSTDAAALKKGITDLTNYPGAAGTIEKFVDRVSIHPVELEVFKDGGVGGVQGRRRAPLRDRGRPRDHHAMTRRPARYRVWRCIGYDEHLT*