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scnpilot_solids1_trim150_scaffold_2_118

Organism: SCNPILOT_SOLID_1_TRIM150_Sphingobacteriales_39_76

near complete RP 52 / 55 MC: 1 BSCG 50 / 51 ASCG 13 / 38
Location: 143360..143911

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TMT1_NIAKG similarity UNIREF
DB: UNIREF100
  • Identity: 71.0
  • Coverage: 183.0
  • Bit_score: 280
  • Evalue 1.50e-72
RNA polymerase sigma factor {ECO:0000313|EMBL:KIC92387.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.6
  • Coverage: 183.0
  • Bit_score: 289
  • Evalue 4.60e-75
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 71.0
  • Coverage: 183.0
  • Bit_score: 280
  • Evalue 4.80e-73

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Taxonomy

Flavihumibacter sp. ZG627 → Flavihumibacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 552
ATGAGTCAACAACCGGACGATAAAGAACTCTTACTGCAGTTTAAAAATGCAAGTACCCGGGAAGCCGCCTATACCCAAATCATTAAGAAGTACCAGGAAAAGCTGTACTGGCATATCCGCCGCTTAGTGATTGGGCACGACGACGCCAATGATGTATTACAGAATATGTTTATAAAAGTTTGGAAAAACTTAGATAATTTCAGGGAAGACAGCCAATTGTACACCTGGCTATACCGTATTGCTACCAATGAATCTCTTAGCTTTATTGACCAGGCGAAGCGAAAAGCCACCACTTCGATGAGTGATCATGAAGATTATTACAGCAATAAATTAAAATCAGATAAAGATTTTGACAGTAAGAAATTAGAATGGAAACTGCAATTGGCAATACAGGAATTACCCGAAAAACAAAAAGCGGTATTTAATTTACGCTATTTTGATGAAATGCCCTACGAAGAAATGAGTAAAGTGTTGGAAACCAGTGAGGGAGCGCTAAAAGCCAGTTATCATCATGCGGTAAAGAAAATTGAAGATTATATACTTAATCGTTAA
PROTEIN sequence
Length: 184
MSQQPDDKELLLQFKNASTREAAYTQIIKKYQEKLYWHIRRLVIGHDDANDVLQNMFIKVWKNLDNFREDSQLYTWLYRIATNESLSFIDQAKRKATTSMSDHEDYYSNKLKSDKDFDSKKLEWKLQLAIQELPEKQKAVFNLRYFDEMPYEEMSKVLETSEGALKASYHHAVKKIEDYILNR*