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scnpilot_solids1_trim150_scaffold_2

Search features with annotation key words

Displaying items 91-120 of 499 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_2_91
Riemerella anatipestifer, Riemerella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(109314..109514)
DNA (201bp) protein (67aa)
Uncharacterized protein n=1 Tax=Riemerella anatipestifer (strain ATCC 11845 / DSM 15868 / JCM 9532 / NCTC 11014) RepID=H8MAZ0_RIEAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFD56261.1}; TaxID=693978 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Riemerella.;" source="Riemerella anatipestifer (strain ATCC 11845 / DSM 15868 / JCM 9532 /; NCTC 11014).;"
scnpilot_solids1_trim150_scaffold_2_92
Chryseobacterium sp. JM1, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(109550..110131)
DNA (582bp) protein (194aa)
Uncharacterized protein {ECO:0000313|EMBL:KFF23025.1}; TaxID=1233950 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. JM1.;"
scnpilot_solids1_trim150_scaffold_2_93
Riemerella anatipestifer, Riemerella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(110143..111807)
DNA (1665bp) protein (555aa)
Uncharacterized protein n=1 Tax=Riemerella anatipestifer (strain ATCC 11845 / DSM 15868 / JCM 9532 / NCTC 11014) RepID=H8MAZ0_RIEAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFD56261.1}; TaxID=693978 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Riemerella.;" source="Riemerella anatipestifer (strain ATCC 11845 / DSM 15868 / JCM 9532 /; NCTC 11014).;"
scnpilot_solids1_trim150_scaffold_2_94
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

111942..113849
DNA (1908bp) protein (636aa)
RecQ familyATP-dependent DNA helicase; K03654 ATP-dependent DNA helicase RecQ [EC:3.6.4.12]
ATP-dependent DNA helicase, RecQ family n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TP55_NIAKG
ATP-dependent DNA helicase, RecQ family {ECO:0000313|EMBL:AEW03173.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids1_trim150_scaffold_2_95
Pedobacter kyungheensis, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(114052..115965)
DNA (1914bp) protein (638aa)
hypothetical protein n=1 Tax=Pedobacter arcticus RepID=UPI00031EAFB0 rbh
Sulfatase {ECO:0000313|EMBL:KIA96899.1}; TaxID=1069985 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter kyungheensis.;"
phosphoglycerol transferase family protein, alkaline phosphatase superfamily rbh
scnpilot_solids1_trim150_scaffold_2_96
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(116008..117549)
DNA (1542bp) protein (514aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000361D544
ATPase {ECO:0000313|EMBL:KIC92453.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
hypothetical protein; K06915 rbh
scnpilot_solids1_trim150_scaffold_2_97
Pedobacter sp. NL19, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

117704..119014
DNA (1311bp) protein (437aa)
Putative Zn-dependent peptidase n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KNZ0_SOLCM rbh
Contig80, whole genome shotgun sequence {ECO:0000313|EMBL:KIO75853.1}; TaxID=1503925 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. NL19.;"
putative Zn-dependent peptidase rbh
scnpilot_solids1_trim150_scaffold_2_98
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

119038..121125
DNA (2088bp) protein (696aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00037415C8 rbh
putative Zn-dependent peptidase rbh
Putative Zn-dependent peptidase {ECO:0000313|EMBL:AFD05511.1}; Flags: Precursor;; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
scnpilot_solids1_trim150_scaffold_2_99
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

121279..121977
DNA (699bp) protein (233aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TP51_NIAKG
Putative two-component response regulator {ECO:0000313|EMBL:GAO45042.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
two component transcriptional regulator, winged helix family
scnpilot_solids1_trim150_scaffold_2_100
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(122151..122978)
DNA (828bp) protein (276aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037F5518 rbh
Beta-lactamase {ECO:0000313|EMBL:KIC92464.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
beta-lactamase; K06167 PhnP protein
scnpilot_solids1_trim150_scaffold_2_101
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(122994..123272)
DNA (279bp) protein (93aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000370F53A
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
scnpilot_solids1_trim150_scaffold_2_102
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(123373..124929)
DNA (1557bp) protein (519aa)
Response regulator receiver protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TP66_NIAKG
response regulator receiver protein
Response regulator receiver protein {ECO:0000313|EMBL:AEW03184.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids1_trim150_scaffold_2_103
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

125082..126266
DNA (1185bp) protein (395aa)
Metal dependent phosphohydrolase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TP65_NIAKG
Phosphohydrolase {ECO:0000313|EMBL:KIC92865.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
metal dependent phosphohydrolase; K06885
scnpilot_solids1_trim150_scaffold_2_104
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

126288..127337
DNA (1050bp) protein (350aa)
UDP-3-O-acylglucosamine N-acyltransferase {ECO:0000256|HAMAP-Rule:MF_00523}; EC=2.3.1.- {ECO:0000256|HAMAP-Rule:MF_00523};; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase; K02536 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
UDP-3-O-acylglucosamine N-acyltransferase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TP64_NIAKG
scnpilot_solids1_trim150_scaffold_2_105
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

127424..128830
DNA (1407bp) protein (469aa)
UDP-3-O-(3-hydroxymyristoyl) N-acetylglucosamine deacetylase, 3-hydroxyacyl-(acyl-carrier-protein) dehydratase; K02372 3R-hydroxymyristoyl ACP dehydrase [EC:4.2.1.-]; K02535 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ {ECO:0000256|SAAS:SAAS00064869}; EC=3.5.1.- {ECO:0000256|SAAS:SAAS00041386};; EC=4.2.1.59 {ECO:0000256|SAAS:SAAS00064862};; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase {ECO:0000256|SAAS:SAAS00041388}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
UDP-3-O-(3-hydroxymyristoyl) N-acetylglucosamine deacetylase, 3-hydroxyacyl-(Acyl-carrier-protein) dehydratase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TP63_NIAKG
scnpilot_solids1_trim150_scaffold_2_106
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

128844..129689
DNA (846bp) protein (282aa)
acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase; K00677 UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase {ECO:0000256|SAAS:SAAS00064156}; EC=2.3.1.129 {ECO:0000256|SAAS:SAAS00001267};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Acyl-(Acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TP62_NIAKG
scnpilot_solids1_trim150_scaffold_2_107
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

129727..130335
DNA (609bp) protein (203aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037B4D7A
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KIC92458.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
ABC transporter
scnpilot_solids1_trim150_scaffold_2_108
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(130336..131550)
DNA (1215bp) protein (405aa)
Alanine dehydrogenase; K00259 alanine dehydrogenase [EC:1.4.1.1]
Alanine dehydrogenase {ECO:0000313|EMBL:AEW03176.1}; EC=1.4.1.1 {ECO:0000313|EMBL:AEW03176.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Alanine dehydrogenase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TP58_NIAKG
scnpilot_solids1_trim150_scaffold_2_109
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(131577..131990)
DNA (414bp) protein (138aa)
Uncharacterized protein family UPF0079, ATPase n=1 Tax=Niabella soli DSM 19437 RepID=H1NQM3_9SPHI
ATP/GTP hydrolase {ECO:0000313|EMBL:AHF15928.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hydrolase; K06925 UPF0079 ATP-binding protein
scnpilot_solids1_trim150_scaffold_2_110
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

132053..134176
DNA (2124bp) protein (708aa)
heavy metal translocating P-type ATPase; K01533 Cu2+-exporting ATPase [EC:3.6.3.4]
Heavy metal translocating P-type ATPase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TP56_NIAKG
ATPase P {ECO:0000313|EMBL:KIC92872.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
scnpilot_solids1_trim150_scaffold_2_111
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

134327..135703
DNA (1377bp) protein (459aa)
iron-sulfur cluster binding protein n=1 Tax=Segetibacter koreensis RepID=UPI00037061D2
[Fe-S]-binding protein {ECO:0000313|EMBL:KIC96059.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
iron-sulfur cluster binding protein
scnpilot_solids1_trim150_scaffold_2_112
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

135749..137032
DNA (1284bp) protein (428aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000360617F
Uncharacterized protein {ECO:0000313|EMBL:KIC89703.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_2_113
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(137013..137951)
DNA (939bp) protein (313aa)
DMT(Drug/metabolite transporter) superfamily permease id=4402472 bin=GWA2_Flavobacterium_35_26 species=Flavobacterium sp. CF136 genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWA2_Flavobacterium_35_26 organism_group=Bacteroidetes organism_desc=Good+ six scaffolds
putative drug/metabolite-transporting permease
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
scnpilot_solids1_trim150_scaffold_2_114
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(137956..139467)
DNA (1512bp) protein (504aa)
phosphoribosylaminoimidazolecarboxamide formyltransferase; K00602 phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
IMP cyclohydrolase n=1 Tax=Niabella aurantiaca RepID=UPI00036C37A1
Bifunctional purine biosynthesis protein PurH {ECO:0000256|HAMAP-Rule:MF_00139, ECO:0000256|SAAS:SAAS00010516}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
scnpilot_solids1_trim150_scaffold_2_115
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(139482..141578)
DNA (2097bp) protein (699aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037835FD
ComEC/Rec2-like protein; K02238 competence protein ComEC
ComEC/Rec2-related protein {ECO:0000313|EMBL:AEW02013.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids1_trim150_scaffold_2_116
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(141620..142417)
DNA (798bp) protein (266aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003827F39
S1/P1 nuclease
S1/P1 nuclease {ECO:0000313|EMBL:ADZ78108.1}; Flags: Precursor;; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. (strain 21).;"
scnpilot_solids1_trim150_scaffold_2_117
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(142442..143218)
DNA (777bp) protein (259aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5IUL7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK02917.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
FkbM family methyltransferase
scnpilot_solids1_trim150_scaffold_2_118
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

143360..143911
DNA (552bp) protein (184aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TMT1_NIAKG
RNA polymerase sigma factor {ECO:0000313|EMBL:KIC92387.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily
scnpilot_solids1_trim150_scaffold_2_119
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

143943..144668
DNA (726bp) protein (242aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TMT0_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW03101.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids1_trim150_scaffold_2_120
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

144679..145092
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TMS9_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW03100.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Displaying items 91-120 of 499 in total

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