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scnpilot_solids1_trim150_scaffold_2

Search features with annotation key words

Displaying items 61-90 of 499 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_2_61
unknown

Not on your lists

72223..72627
DNA (405bp) protein (135aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_2_62
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(72650..75415)
DNA (2766bp) protein (922aa)
alanyl-tRNA synthetase; K01872 alanyl-tRNA synthetase [EC:6.1.1.7] rbh
Alanine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015673}; EC=6.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015673};; Alanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00036}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Alanine--tRNA ligase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TMH3_NIAKG rbh
scnpilot_solids1_trim150_scaffold_2_63
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

75490..76464
DNA (975bp) protein (325aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00035F53D4
Peptidase M23 {ECO:0000313|EMBL:KIC96078.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
peptidase M23
scnpilot_solids1_trim150_scaffold_2_64
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

76571..77152
DNA (582bp) protein (194aa)
Regulatory protein MerR n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TMK1_NIAKG
regulatory protein MerR
Regulatory protein MerR {ECO:0000313|EMBL:AEW01989.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids1_trim150_scaffold_2_65
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

77157..77672
DNA (516bp) protein (172aa)
Thioredoxin-like protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NSM4_9SPHI
Thioredoxin {ECO:0000313|EMBL:AHF16074.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_2_66
Pedobacter sp. NL19, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(77679..78161)
DNA (483bp) protein (161aa)
Contig16, whole genome shotgun sequence {ECO:0000313|EMBL:KIO78332.1}; TaxID=1503925 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. NL19.;"
scnpilot_solids1_trim150_scaffold_2_67
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(78192..79313)
DNA (1122bp) protein (374aa)
MscS Mechanosensitive ion channel n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TMK4_NIAKG
mechanosensitive ion channel MscS; K16052 MscS family membrane protein YnaI
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
scnpilot_solids1_trim150_scaffold_2_68
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(79319..80185)
DNA (867bp) protein (289aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TMK5_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW01993.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids1_trim150_scaffold_2_69
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(80185..80943)
DNA (759bp) protein (253aa)
metallophosphoesterase; K03269 UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
UDP-2,3-diacylglucosamine hydrolase n=1 Tax=Niabella aurantiaca RepID=UPI00037182C7
UDP-2,3-diacylglucosamine hydrolase {ECO:0000313|EMBL:AHF16075.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
scnpilot_solids1_trim150_scaffold_2_70
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(80953..81384)
DNA (432bp) protein (144aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000364A005
AIG2 family protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
scnpilot_solids1_trim150_scaffold_2_71
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(81549..82178)
DNA (630bp) protein (210aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00035EBE1F
Lactate utilization protein B/C {ECO:0000313|EMBL:KIC89689.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
lactate utilization protein B/C; K00782 hypothetical protein
scnpilot_solids1_trim150_scaffold_2_72
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(82198..84279)
DNA (2082bp) protein (694aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
membrane protease FtsH catalytic subunit; K03798 cell division protease FtsH [EC:3.4.24.-]
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003817E86
scnpilot_solids1_trim150_scaffold_2_73
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(84316..84705)
DNA (390bp) protein (130aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000367A469
iojap family protein; K09710 ribosome-associated protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
scnpilot_solids1_trim150_scaffold_2_74
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

84824..85564
DNA (741bp) protein (247aa)
biotin--acetyl-CoA-carboxylase ligase; K03524 BirA family transcriptional regulator, biotin operon repressor / biotin-[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000366A2CF
Uncharacterized protein {ECO:0000313|EMBL:KIC96182.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
scnpilot_solids1_trim150_scaffold_2_75
Deinococcus peraridilitoris, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(85588..85911)
DNA (324bp) protein (108aa)
hypothetical protein n=1 Tax=Deinococcus apachensis RepID=UPI000376258F
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFZ69492.1}; TaxID=937777 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="Deinococcus peraridilitoris (strain DSM 19664 / LMG 22246 / CIP 109416; / KR-200).;"
scnpilot_solids1_trim150_scaffold_2_76
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(85889..86368)
DNA (480bp) protein (160aa)
peroxiredoxin; K03564 peroxiredoxin Q/BCP [EC:1.11.1.15]
Peroxiredoxin n=1 Tax=Niabella soli DSM 19437 RepID=H1NS65_9SPHI
Thiol peroxidase {ECO:0000313|EMBL:AHF16043.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
scnpilot_solids1_trim150_scaffold_2_77
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(86380..88152)
DNA (1773bp) protein (591aa)
Peptidase M23 n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TML8_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:KIC89696.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
peptidase M23
scnpilot_solids1_trim150_scaffold_2_78
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

88369..91218
DNA (2850bp) protein (950aa)
Carbamoyl-phosphate synthase (glutamine-hydrolyzing) {ECO:0000256|SAAS:SAAS00086116}; EC=6.3.5.5 {ECO:0000256|SAAS:SAAS00086116};; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
carbamoyl-phosphate synthase large subunit; K01955 carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
Carbamoyl-phosphate synthase, large subunit n=1 Tax=Niabella soli DSM 19437 RepID=H1NS52_9SPHI
scnpilot_solids1_trim150_scaffold_2_79
Leadbetterella byssophila, Leadbetterella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

91374..94640
DNA (3267bp) protein (1089aa)
peptidase s41; K08676 tricorn protease [EC:3.4.21.-] rbh
Peptidase S41 n=1 Tax=Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15) RepID=E4RW77_LEAB4 rbh
Peptidase S41 {ECO:0000313|EMBL:ADQ17112.1}; Flags: Precursor;; TaxID=649349 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Leadbetterella.;" source="Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15).;"
scnpilot_solids1_trim150_scaffold_2_80
unknown

Not on your lists

94951..96474
DNA (1524bp) protein (508aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_2_81
unknown

Not on your lists

96479..96883
DNA (405bp) protein (135aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_2_82
Elizabethkingia anophelis, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

97687..98658
DNA (972bp) protein (324aa)
Uncharacterized protein n=2 Tax=Elizabethkingia anophelis RepID=L8K6I0_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:ELR79680.1}; TaxID=1246994 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia anophelis R26.;"
scnpilot_solids1_trim150_scaffold_2_83
unknown

Not on your lists

98649..99275
DNA (627bp) protein (209aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_2_84
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(99432..100391)
DNA (960bp) protein (320aa)
1-deoxy-D-xylulose-5-phosphate synthase; K00615 transketolase [EC:2.2.1.1]
1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Niabella soli DSM 19437 RepID=H1NUF4_9SPHI
Transketolase {ECO:0000313|EMBL:KIC92388.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
scnpilot_solids1_trim150_scaffold_2_85
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(100435..101532)
DNA (1098bp) protein (366aa)
UDP-galactose 4-epimerase; K01784 UDP-glucose 4-epimerase [EC:5.1.3.2]
UDP-galactose 4-epimerase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TMT5_NIAKG
UDP-glucose 4-epimerase {ECO:0000313|EMBL:GAO45094.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
scnpilot_solids1_trim150_scaffold_2_86
GWF2_Bacteroidetes_38_335_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(101572..102714)
DNA (1143bp) protein (381aa)
Phosphate transporter id=4204637 bin=GWF2_Bacteroidetes_38_335 species=unknown genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_38_335 organism_group=Bacteroidetes organism_desc=a11
phosphate transporter; K03306 inorganic phosphate transporter, PiT family
Tax=GWF2_Bacteroidetes_38_335_curated
scnpilot_solids1_trim150_scaffold_2_87
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(102750..103493)
DNA (744bp) protein (248aa)
Putative phosphate transport regulator n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TMT8_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:GAO45091.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
putative phosphate transport regulator; K07220 hypothetical protein
scnpilot_solids1_trim150_scaffold_2_88
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

103515..104819
DNA (1305bp) protein (435aa)
Phosphate-selective porin O and P n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PP23_CHIPD rbh
phosphate-selective porin O and P rbh
Phosphate-selective porin O and P {ECO:0000313|EMBL:ACU58720.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_solids1_trim150_scaffold_2_89
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

104918..107716
DNA (2799bp) protein (933aa)
TonB-dependent receptor plug n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TMU1_NIAKG
TonB-dependent receptor plug
TonB-dependent receptor plug {ECO:0000313|EMBL:AEW03112.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids1_trim150_scaffold_2_90
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

107747..109162
DNA (1416bp) protein (472aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TMU2_NIAKG rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEW03113.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Displaying items 61-90 of 499 in total

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