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scnpilot_solids1_trim150_scaffold_2

Search features with annotation key words

Displaying items 121-150 of 499 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_2_121
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(145306..146037)
DNA (732bp) protein (244aa)
Beta-lactamase domain protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TMS8_NIAKG
beta-lactamase
Beta-lactamase domain protein {ECO:0000313|EMBL:AEW03099.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids1_trim150_scaffold_2_122
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(146065..147411)
DNA (1347bp) protein (449aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003789EDD
cell cycle protein; K05837 rod shape determining protein RodA
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
scnpilot_solids1_trim150_scaffold_2_123
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(147420..149564)
DNA (2145bp) protein (715aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036078A2
Penicillin-binding protein {ECO:0000313|EMBL:GAO45101.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
peptidoglycan glycosyltransferase; K05515 penicillin-binding protein 2
scnpilot_solids1_trim150_scaffold_2_124
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(149621..150154)
DNA (534bp) protein (178aa)
Rod shape-determining protein MreD n=1 Tax=Niabella soli DSM 19437 RepID=H1NUF1_9SPHI
Rod shape-determining protein MreD {ECO:0000313|EMBL:AHF15716.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
rod shape-determining protein MreD
scnpilot_solids1_trim150_scaffold_2_125
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(150164..151024)
DNA (861bp) protein (287aa)
Cell shape-determining protein MreC n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TMS4_NIAKG
rod shape-determining protein MreC; K03570 rod shape-determining protein MreC
Rod shape-determining protein MreC {ECO:0000313|EMBL:AEW03095.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids1_trim150_scaffold_2_126
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(151091..152116)
DNA (1026bp) protein (342aa)
Cell shape determining protein, MreB/Mrl family n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TMS3_NIAKG
Rod shape-determining protein MreB {ECO:0000313|EMBL:KIC92381.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
MreB/Mrl family cell shape determining protein; K03569 rod shape-determining protein MreB and related proteins
scnpilot_solids1_trim150_scaffold_2_127
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(152247..153530)
DNA (1284bp) protein (428aa)
phosphoribosylamine--glycine ligase; K01945 phosphoribosylamine--glycine ligase [EC:6.3.4.13]
Phosphoribosylamine--glycine ligase {ECO:0000256|HAMAP-Rule:MF_00138}; EC=6.3.4.13 {ECO:0000256|HAMAP-Rule:MF_00138};; GARS {ECO:0000256|HAMAP-Rule:MF_00138}; Glycinamide ribonucleotide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; Phosphoribosylglycinamide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Phosphoribosylamine--glycine ligase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TMS1_NIAKG
scnpilot_solids1_trim150_scaffold_2_128
Chryseobacterium antarcticum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

153743..155524
DNA (1782bp) protein (594aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00036CAEE8 rbh
Amino acid transporter {ECO:0000313|EMBL:KEY19427.1}; TaxID=266748 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium antarcticum.;"
amino acid/peptide transporter (peptide:H symporter)
scnpilot_solids1_trim150_scaffold_2_129
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

155601..157643
DNA (2043bp) protein (681aa)
peptide transporter n=1 Tax=Niabella aurantiaca RepID=UPI00037B49B4 rbh
oligopeptide transporter rbh
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
scnpilot_solids1_trim150_scaffold_2_130
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

157733..158872
DNA (1140bp) protein (380aa)
Butyryl-CoA dehydrogenase {ECO:0000313|EMBL:AEW03190.1}; EC=1.3.8.1 {ECO:0000313|EMBL:AEW03190.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Butyryl-CoA dehydrogenase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TP72_NIAKG
butyryl-CoA dehydrogenase
scnpilot_solids1_trim150_scaffold_2_131
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

159029..159826
DNA (798bp) protein (266aa)
lipid A biosynthesis acyltransferase; K02517 lipid A biosynthesis lauroyl acyltransferase [EC:2.3.1.-]
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036BCDD3
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
scnpilot_solids1_trim150_scaffold_2_132
BJP_08E140C01_Flavobacteriales_35_8, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(159889..160104)
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=uncultured Desulfofustis sp. PB-SRB1 RepID=V4L091_9DELT
response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
Tax=BJP_08E140C01_Flavobacteriales_35_8
scnpilot_solids1_trim150_scaffold_2_133
unknown

Not on your lists

160535..161062
DNA (528bp) protein (176aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_2_134
unknown

Not on your lists

161088..161729
DNA (642bp) protein (214aa)
hypothetical protein n=1 Tax=Cytophagales str. B6 RepID=UPI0003B30277
scnpilot_solids1_trim150_scaffold_2_135
Fulvivirga imtechensis, Fulvivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

161726..162505
DNA (780bp) protein (260aa)
Uncharacterized protein n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8JX76_9BACT
Uncharacterized protein {ECO:0000313|EMBL:ELR73676.1}; TaxID=1237149 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Fulvivirga.;" source="Fulvivirga imtechensis AK7.;"
signal transduction histidine kinase
scnpilot_solids1_trim150_scaffold_2_136
Fulvivirga imtechensis, Fulvivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

162514..163170
DNA (657bp) protein (219aa)
Two-component response regulator yhcZ n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8JY25_9BACT
Two-component response regulator yhcZ {ECO:0000313|EMBL:ELR73675.1}; TaxID=1237149 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Fulvivirga.;" source="Fulvivirga imtechensis AK7.;"
LuxR family transcriptional regulator
scnpilot_solids1_trim150_scaffold_2_137
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(163174..163857)
DNA (684bp) protein (228aa)
tRNA (guanine-N1)-methyltransferase; K00554 tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
tRNA (guanine-N(1)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464}; EC=2.1.1.228 {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464};; M1G-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; tRNA [GM37] methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).
tRNA (guanine-N(1)-)-methyltransferase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PQD9_CHIPD
scnpilot_solids1_trim150_scaffold_2_138
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(163875..164261)
DNA (387bp) protein (129aa)
Heat shock protein Hsp15 n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQK1_NIAKG
heat shock protein Hsp15; K04762 ribosome-associated heat shock protein Hsp15
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
scnpilot_solids1_trim150_scaffold_2_139
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

164345..166516
DNA (2172bp) protein (724aa)
dipeptidyl-peptidase IV (EC:3.4.14.5); K01278 dipeptidyl-peptidase 4 [EC:3.4.14.5]
Dipeptidyl-peptidase IV {ECO:0000313|EMBL:AEI51031.1}; EC=3.4.14.5 {ECO:0000313|EMBL:AEI51031.1};; Flags: Precursor;; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;"
peptidase S9 n=1 Tax=Spirosoma panaciterrae RepID=UPI00037E632B
scnpilot_solids1_trim150_scaffold_2_140
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(166558..167874)
DNA (1317bp) protein (439aa)
DNA mismatch repair protein MutS domain protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TIG8_NIAKG
DNA mismatch repair protein MutS domain-containing protein
DNA mismatch repair protein MutS domain protein {ECO:0000313|EMBL:AEW01784.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids1_trim150_scaffold_2_141
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(167877..169220)
DNA (1344bp) protein (448aa)
Allantoinase; K01465 dihydroorotase [EC:3.5.2.3]
Allantoinase {ECO:0000313|EMBL:AEW01783.1}; EC=3.5.2.5 {ECO:0000313|EMBL:AEW01783.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Allantoinase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TIG7_NIAKG
scnpilot_solids1_trim150_scaffold_2_142
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

169263..170978
DNA (1716bp) protein (572aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TIG6_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW01782.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids1_trim150_scaffold_2_143
Joostella marina, Joostella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(170992..171915)
DNA (924bp) protein (308aa)
Putative membrane protein n=1 Tax=Joostella marina DSM 19592 RepID=I3C8J7_9FLAO rbh
Putative membrane protein {ECO:0000313|EMBL:EIJ39940.1}; TaxID=926559 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Joostella.;" source="Joostella marina DSM 19592.;"
hypothetical protein rbh
scnpilot_solids1_trim150_scaffold_2_144
Zobellia galactanivorans, Zobellia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(171988..172872)
DNA (885bp) protein (295aa)
LysR-type transcriptional regulator n=1 Tax=Zobellia galactanivorans (strain DSM 12802 / CIP 106680 / NCIMB 13871 / Dsij) RepID=G0L4Z0_ZOBGA rbh
LysR family transcriptional regulator rbh
LysR-type transcriptional regulator {ECO:0000313|EMBL:CAZ95849.1}; TaxID=63186 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Zobellia.;" source="Zobellia galactanivorans (strain DSM 12802 / CIP 106680 / NCIMB 13871; / Dsij).;"
scnpilot_solids1_trim150_scaffold_2_145
Arcticibacter svalbardensis, Arcticibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(172984..174273)
DNA (1290bp) protein (430aa)
Uncharacterized protein n=1 Tax=Arcticibacter svalbardensis MN12-7 RepID=R9GPC3_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:EOR93395.1}; TaxID=1150600 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Arcticibacter.;" source="Arcticibacter svalbardensis MN12-7.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_2_146
Flavobacterium suncheonense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

174444..174938
DNA (495bp) protein (165aa)
Cytochrome c class I n=1 Tax=Flavobacterium saliperosum S13 RepID=V6SLY3_9FLAO
Cytochrome C {ECO:0000313|EMBL:KGO89604.1}; TaxID=1121899 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium suncheonense GH29-5 = DSM 17707.;"
cytochrome c class I
scnpilot_solids1_trim150_scaffold_2_147
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

175039..177036
DNA (1998bp) protein (666aa)
nitrous oxide reductase apoprotein; K00376 nitrous-oxide reductase [EC:1.7.2.4]
nitrous-oxide reductase n=1 Tax=Segetibacter koreensis RepID=UPI00036A0A00
Nitrous oxide reductase {ECO:0000313|EMBL:KIC89491.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
scnpilot_solids1_trim150_scaffold_2_148
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

177092..177691
DNA (600bp) protein (200aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TDS2_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW01522.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids1_trim150_scaffold_2_149
Pseudopedobacter saltans, Pseudopedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

177684..178127
DNA (444bp) protein (148aa)
Nitrous-oxide reductase accessory protein NosL n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0S500_PEDSD
nitrous-oxide reductase accessory protein NosL
Nitrous-oxide reductase accessory protein NosL {ECO:0000313|EMBL:ADY54174.1}; Flags: Precursor;; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" source="Pseudopedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 /; LMG 10337 / NBRC 100064 / NCIMB 13643) (Pedobacter saltans).;"
scnpilot_solids1_trim150_scaffold_2_150
Flavobacterium saliperosum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

178172..179488
DNA (1317bp) protein (439aa)
Copper-binding protein n=1 Tax=Flavobacterium saliperosum S13 RepID=V6SNB0_9FLAO
Copper-binding protein {ECO:0000313|EMBL:ESU27712.1}; TaxID=1341155 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium saliperosum S13.;"
copper-binding protein; K07218 nitrous oxidase accessory protein
Displaying items 121-150 of 499 in total

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