ggKbase home page

scnpilot_solids1_trim150_scaffold_2_144

Organism: SCNPILOT_SOLID_1_TRIM150_Sphingobacteriales_39_76

near complete RP 52 / 55 MC: 1 BSCG 50 / 51 ASCG 13 / 38
Location: comp(171988..172872)

Top 3 Functional Annotations

Value Algorithm Source
LysR-type transcriptional regulator n=1 Tax=Zobellia galactanivorans (strain DSM 12802 / CIP 106680 / NCIMB 13871 / Dsij) RepID=G0L4Z0_ZOBGA similarity UNIREF
DB: UNIREF100
  • Identity: 62.9
  • Coverage: 294.0
  • Bit_score: 360
  • Evalue 1.90e-96
  • rbh
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 62.9
  • Coverage: 294.0
  • Bit_score: 360
  • Evalue 5.90e-97
  • rbh
LysR-type transcriptional regulator {ECO:0000313|EMBL:CAZ95849.1}; TaxID=63186 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Zobellia.;" source="Zobellia galactanivorans (strain DSM 12802 / CIP 106680 / NCIMB 13871; / Dsij).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.9
  • Coverage: 294.0
  • Bit_score: 360
  • Evalue 2.60e-96

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Zobellia galactanivorans → Zobellia → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 885
ATGCGAACCAAATTACACATTTTTAAAGCTGCTGCACACCATTTAAGTTTTACCAAGGCAGCAGAAAAATTATTTATTTCTCAACCGGCTGTTTCAAAAGTAATTGGTGAATTAGAATCGTTGTACAAAACCAATTTTTTTATACGAAAACGAAATAGTATAGAGCTTACGCCACAGGGTATCCTTTTTTTACAGTATACTGATAAAATATTGGCCATTTATTCAGAAATGGAAGACCGTTTCCTGAACCCTGAAAAAGAAACACCCGCACAATTAAATTTTGGGGCCAGCACCACAGTTGCTAATTATGTAGTACCTAAAATACTGGCCACTTATAAACTCAAATATCCTATTACCCACTTTACTATTAAGAGTGGTAATTCTGAAGAAATAGAAGAGTTAATCCTGAATCAGCAGTTGGATTTTGGTATTACCGAAGGGAAAAATACAAACCGGAAACTACAGTTCAAAAATTTTATAAAAGATGAAATCGTTTTAGTAACCCGGTTTGGTAATAATAGCATAAAGCAAGGCCCGGTTTCTAAAAAAGAGTTTATACAATGCCCGATTATTGAAAGAGAAGCGGGGTCGGGAACCCGAAAAATCATTTATAAAACTTTAAAAAGCCAGGGTATTGATAAATTAAATGTAACCGTGCATTTAAACAGTACCGAAGCCATAAAGAATTATTTATACCATACTAATAGTTTTGCCCTGGTTTCCCGGCATGCCATCCGGGAAGATATATTATACCATAAACTAAAAATAATCCCCATCAAAGACCTGGTTTTTGAAAGATGGTTTTACTTTGTATGCCGCACCGGGTTTCAGTCAAAAACCATGGACCAGTTTCAACGTTTTTTTTTGCACAACCATAACTTATAG
PROTEIN sequence
Length: 295
MRTKLHIFKAAAHHLSFTKAAEKLFISQPAVSKVIGELESLYKTNFFIRKRNSIELTPQGILFLQYTDKILAIYSEMEDRFLNPEKETPAQLNFGASTTVANYVVPKILATYKLKYPITHFTIKSGNSEEIEELILNQQLDFGITEGKNTNRKLQFKNFIKDEIVLVTRFGNNSIKQGPVSKKEFIQCPIIEREAGSGTRKIIYKTLKSQGIDKLNVTVHLNSTEAIKNYLYHTNSFALVSRHAIREDILYHKLKIIPIKDLVFERWFYFVCRTGFQSKTMDQFQRFFLHNHNL*