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scnpilot_solids1_trim150_scaffold_118_27

Organism: SCNPILOT_SOLID_1_TRIM150_Sphingobacteriales_39_76

near complete RP 52 / 55 MC: 1 BSCG 50 / 51 ASCG 13 / 38
Location: comp(22268..24211)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S1 n=1 Tax=Segetibacter koreensis RepID=UPI00035FE542 similarity UNIREF
DB: UNIREF100
  • Identity: 77.6
  • Coverage: 646.0
  • Bit_score: 1013
  • Evalue 6.80e-293
RNA binding S1 domain-containing protein; K02945 small subunit ribosomal protein S1 similarity KEGG
DB: KEGG
  • Identity: 77.2
  • Coverage: 646.0
  • Bit_score: 1008
  • Evalue 9.00e-292
RNA binding S1 domain protein {ECO:0000313|EMBL:AEW00915.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.2
  • Coverage: 646.0
  • Bit_score: 1008
  • Evalue 4.00e-291

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Taxonomy

Niastella koreensis → Niastella → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1944
ATGTCTTTTAATATTAATAAACAATTAAACGCAGACGAACAGGAACCAAAAGCCTCTGAGGCGGTTGAGTCAACTGCGACAACAAATGAGCCTGTACAAGCTGAAACAGAGTCAGAGTCAAAATCAGAACCGGTAGCAGTAGAAACAGCCCATGATGATTTCGACTGGAGCAGGGATAAAAGAAATATTTCTGCCTACAGCCAGGAAGAAAAAGAAAAGTACGACAAAGTATATGAAGGTACTTTTAAACAAATTAACGATGGCGAAATGATCCAGGCTACTGTAGAATCATTAACCAAAACTGATGCCGTAGTAAACATTGGCTTCAAAAGCGATGGGCTCATCTCTTTAAACGAATTCAGGGATATTCCCGGAGGTGTAAAAGTTGGTGATATCGTAGAAGTAATGGTGGTTGAAAAAGAAGACCGGGACGGTAACCTGAACCTGAGCAGGAAATCTGCACGGATTACAAGGGCCTGGGAAAAAATTATGGAAGTAAATAAGACCGGCGAAATAGTTACCGGTATCGTTACCAGTAAAACAAAAGGCGGCTTGATTGTAGATGTATTTGGAATGGAAACCTTCTTGCCGGGATCACAAATTGATGTAAAACCCGTTACCGATTACGACCAGTTTGTGGGTAAAACCATGGAGTTTAAAGTGGTTAAAATTAATGAAGCCATTAAAAATGCAGTGGTATCTCACAAAGCACTTATTGAAAGTGATATTGAAGCACAAAGAGCTGAAATTATCGGTAAACTTGAAAAAGGACAAGTACTGGAAGGTACCATCAAAAACATCACTGACTTTGGCGCATTTCTTGACCTGGGCGGTTTAGATGGCTTACTCTATATTACAGATATTTCATGGGGACGCATCACACACCCTTCTGAAGTGTTGAAATTAGATCAAAAATTAAATGTGGTTGTTTTAGACTTTGATGATGATAAAAAACGCATCAGTCTGGGCTTAAAACAATTAACTCCCCACCCATGGGATACACTGGCAGAAAATATTAAAGAAGGTGAAATAGTAAAAGGTAAAGTAGTGAATATTGAAGATTATGGCGCTTTCCTTGAAATGATGCCCGGTGTAGAAGGACTTGTACATGTAAGCGAAATTACATGGGCAAATACACCCATTAACGCAAAAGAATTCTTTAAACTGGGTGATGAATATGAAGCCAAAGTAGTAACCTTAGATAAAGAAACCCGTAAAATGAGTCTTTCTATCAAGCAAATGACAGAAGACCCATGGAGTACCATTGAAACACGTTTCCCCGAAGGCAGCAAACACAACGGCGTAGTGAAAAATATTACTCCCTATGGTGTGTTTGTAGAACTTGCCACCGGTATTGGCGGTATGATTCACATTAGCGACCTGAGTTGGTTAAGGCGTTTTAATAACCCCAGTGAATATACCAAAGTAGGTAACGAGATAGAAGTGATCATTCTGAATATTGATAAGGAAAGCCGTAAATTACAATTGGGGCATAAACAATTAGAAGAAGATCCCTGGAATGCTTTGGAAGCAACTTTTGGAATCGGTTCTATACATGAAGGCACCGTAATTAAAAAAGACGATAAAGGCGTAATGGTTCAATTACCTTACGGGCTTGAAGGTTTTACACCGGCCCGCCATTGTGTGAAAGAAGATGGTAAAACCTTAGCGCTGGATGAAGTGGCAAACTTTATGGTAATAGAATTTGAACGCAGTGACAAACGTATCATCCTAAGCCATACCCGCTGCTGGGAACAAGTGAAAGAAGAAGAACATCACGCCCATGTAAAAGAGAAAAAGGTAGAAGCTGAAACAACTAAAAAAGCGGTAAAAAACCTGCAAAGCAAAGTTGAAAAAGCAACCTTAGGCGACCTGGGAGCCCTGGCGGATATAAAAGCCAAATTAGATAATGAAAATAGTGAATCAGAGGCTAAACCTGAATAA
PROTEIN sequence
Length: 648
MSFNINKQLNADEQEPKASEAVESTATTNEPVQAETESESKSEPVAVETAHDDFDWSRDKRNISAYSQEEKEKYDKVYEGTFKQINDGEMIQATVESLTKTDAVVNIGFKSDGLISLNEFRDIPGGVKVGDIVEVMVVEKEDRDGNLNLSRKSARITRAWEKIMEVNKTGEIVTGIVTSKTKGGLIVDVFGMETFLPGSQIDVKPVTDYDQFVGKTMEFKVVKINEAIKNAVVSHKALIESDIEAQRAEIIGKLEKGQVLEGTIKNITDFGAFLDLGGLDGLLYITDISWGRITHPSEVLKLDQKLNVVVLDFDDDKKRISLGLKQLTPHPWDTLAENIKEGEIVKGKVVNIEDYGAFLEMMPGVEGLVHVSEITWANTPINAKEFFKLGDEYEAKVVTLDKETRKMSLSIKQMTEDPWSTIETRFPEGSKHNGVVKNITPYGVFVELATGIGGMIHISDLSWLRRFNNPSEYTKVGNEIEVIILNIDKESRKLQLGHKQLEEDPWNALEATFGIGSIHEGTVIKKDDKGVMVQLPYGLEGFTPARHCVKEDGKTLALDEVANFMVIEFERSDKRIILSHTRCWEQVKEEEHHAHVKEKKVEAETTKKAVKNLQSKVEKATLGDLGALADIKAKLDNENSESEAKPE*