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scnpilot_solids1_trim150_scaffold_401_26

Organism: SCNPILOT_SOLID_1_TRIM150_Sphingobacteriales_42_11

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38
Location: comp(27190..28848)

Top 3 Functional Annotations

Value Algorithm Source
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.1
  • Coverage: 569.0
  • Bit_score: 819
  • Evalue 2.90e-234
Transcription termination factor Rho n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TF35_NIAKG similarity UNIREF
DB: UNIREF100
  • Identity: 74.7
  • Coverage: 584.0
  • Bit_score: 817
  • Evalue 6.10e-234
  • rbh
transcription termination factor Rho; K03628 transcription termination factor Rho similarity KEGG
DB: KEGG
  • Identity: 74.7
  • Coverage: 584.0
  • Bit_score: 817
  • Evalue 1.90e-234
  • rbh

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Taxonomy

Flavihumibacter sp. ZG627 → Flavihumibacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1659
ATGTACGACATTCTGCAACTGAATGATATGCTCGTTCCTGAGCTGCTTGATATTGCCGAGCAATTGAGCATTGCTAACGCTAAAAAACTCGATAAACAGGAACTCATCTATAAAATATTAGATAAACAGGCTATAGAAAACAGTGCTGAAGCCAAAGGCACAGAAGAAAAAGGGAAGCGCAAGCGTGTTGTTAAAACAACAACGGCCAACAGTACCGAAGAAGCGCTTGTAGAATCCGAACCGGAAAAATCAACTGCACCCGCCAGGAAAAGAAAGATTGTAGCCGCCGAACCGGAAAAAAAATCGGATAGAAAAATAGTAAAAAAGCCAAAACTTTTTCAGGAAGAAACCCCTGAACAAATTGCAAAAAAACGGGAACAGGAAGCTGCCGCTCTTGCTGCTGCTGAAAAAGAAGAACAGCAGGAGCAGGAAAGCCAGTCGGCTGAAGAGGAAGCACCCCAGCCCGAAGAGGCGCCTGCCGAAGAATCACAGTCGGAGCGCAGGCAGTATCCAAACCGTCGCGAACAGAACTTTAACATTGAGTTCGACGGCGTAATAATGAGTGAAGGCGTTTTGGAAATGATGCCCGACGGATATGGTTTTTTAAGAAGCAGTGATTACAATTATCTTTCCTCTCCCGATGATATTTATGTTTCTCCATCGCAGATAAAATTGTTTGGATTAAAAACCGGCGATACTGTGTCGGGGGCAGTACGTCCCCCGAAAGAGGGAGAGAAGTACTTTGCTCTTCTTAAGGTTGAAACGATCAATGCCAAATCACCTGAAGAAGTGAGAGACAGAGTACCATTCGATTACCTTACGCCATTGTTTCCTTTCGAAAAGATGAACCTTTTCACGCAGCCTACTACATTAAGCACACGGATAATAGATTTGTTTACACCAATAGGCAAGGGGCAGCGCGGATTGATTGTGGCTCAACCCAAAACCGGTAAAACGGTTTTGCTGAAAGATATAGCCAATGCAATTGCCGAAAATCATCCGGAGTGTTATATGATGATCGTGTTGGTTGACGAACGTCCGGAAGAAGTAACCGACATGGAAAGAAGTGTGAGAGCTGAGGTTATCGCTTCCACCTTTGATGAACCGGCTGAAAAGCATGTTAAGGTTTCTACCATAGCACTGCAAAAAGCAAAACGCCTGGTAGAATGCGGCCATGATGTGGTTATATTGCTTGACTCTATTACCCGTTTGGCCCGTGCGCACAATACGGTAGCACCTGCATCCGGTAAGGTATTATCGGGCGGTGTGGAAGCCAATGCCATGCAAAAACCAAAACAATTTTTTGGTGCTGCAAGAAAAATTGAGAACGGCGGATCATTAACCATACTGGCTACTGCATTAATAGATACCGGTTCAAAAATGGATGAAGTAATCTTTGAAGAATTCAAAGGAACCGGTAATATGGAACTGCAGTTAGACAGACGGTTGGCTAACAGGCGCATATTTCCTGCCATTGACCTGGTGGCCTCTTCTACCCGCAGGGAAGACCTGCTGCTGGATAAGGATGTATTGAAAAGAATGCATTTGCTTCGTAACTACCTGGCAGACATGAATGCAGAAGAAGCGATGAATGAATTGCTGAAACGCATGAGAGGAACAAAAGACAACCAGGAGTTTTTGGCCAGTATGAATAGCTGA
PROTEIN sequence
Length: 553
MYDILQLNDMLVPELLDIAEQLSIANAKKLDKQELIYKILDKQAIENSAEAKGTEEKGKRKRVVKTTTANSTEEALVESEPEKSTAPARKRKIVAAEPEKKSDRKIVKKPKLFQEETPEQIAKKREQEAAALAAAEKEEQQEQESQSAEEEAPQPEEAPAEESQSERRQYPNRREQNFNIEFDGVIMSEGVLEMMPDGYGFLRSSDYNYLSSPDDIYVSPSQIKLFGLKTGDTVSGAVRPPKEGEKYFALLKVETINAKSPEEVRDRVPFDYLTPLFPFEKMNLFTQPTTLSTRIIDLFTPIGKGQRGLIVAQPKTGKTVLLKDIANAIAENHPECYMMIVLVDERPEEVTDMERSVRAEVIASTFDEPAEKHVKVSTIALQKAKRLVECGHDVVILLDSITRLARAHNTVAPASGKVLSGGVEANAMQKPKQFFGAARKIENGGSLTILATALIDTGSKMDEVIFEEFKGTGNMELQLDRRLANRRIFPAIDLVASSTRREDLLLDKDVLKRMHLLRNYLADMNAEEAMNELLKRMRGTKDNQEFLASMNS*