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scnpilot_solids1_trim150_scaffold_95_94

Organism: SCNPILOT_SOLID_1_TRIM150_Sphingobacteriales_42_11

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38
Location: comp(92136..93167)

Top 3 Functional Annotations

Value Algorithm Source
Regulatory protein GntR HTH n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XV64_PEDHD similarity UNIREF
DB: UNIREF100
  • Identity: 70.8
  • Coverage: 343.0
  • Bit_score: 512
  • Evalue 2.60e-142
  • rbh
GntR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 70.8
  • Coverage: 343.0
  • Bit_score: 512
  • Evalue 8.20e-143
  • rbh
Regulatory protein GntR HTH {ECO:0000313|EMBL:ACU06072.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.8
  • Coverage: 343.0
  • Bit_score: 512
  • Evalue 3.70e-142

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Taxonomy

Pedobacter heparinus → Pedobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1032
ATGAAATTCAGTCATTTTTTTGAACATGTGCACGTTGATGAATTTTCCGCTACGCCCAAGTACCTGCAGCTAACCCACTCTATATTGAATGCGATAGAAGCAGGAAAATTAAAAAAAGACGACCTGGTTCCGTCCATCAATGAACTCAGTTTTGAACTGGAGATATCGAGAGATACTGCCGAAAAAGGATATAAGCATCTTAAAAAAATGGGCGTGCTGGGATCCGTTCCTGGTAAAGGATATTATATTGTTAATGATGATATTAAACAAACCCAGCATGTAATGCTTTTGTTTAATAAACTGAGCGCCCATAAAAAGATCATATACGATGGCTTTGTGGAAACACTGGGTGAGCATGTGGCCATTGATTTTTATATTTATAACAATGATTTTGCCCTGTTTAAAAAATTATTAGGAAATGCCAGGGAAGACTATTCGCATTTTGTGATCATCCCGCATTTTATTGAAGGCGGCGAAAATGCGCACGAAATCATCAATACCATTCCCAGGCATAAACTGATACTTTTGGATAAAAAAATATCCGGCGTAAATGGCGAATATGGCGCCGTATATGAAAATTTTGAAAATGATATTTACAATGCACTGGAACAGGCATTGAAGCAGTTGGCCAAATACCATACCCTAAAGATTATTTTCCCTGAAAAAAGTTACTATCCCAAAGGGATATTAAAAGGCTTCAATCGTTTTTGCCAGGAATATGCCTTTACGCATAAAGTGGTACACGATATTGCAAAAGAACCCATCAATAGCGGCGAGGTATACATCAATGTTATGGAGGCCGATCTTGTAATACTCATTGAAAGGCTTATTACCATGAAATATAAAATAGGCAAGCATATTGGTGTTATTTCCTATAACGAAACACCACTTAAAAAAATAATACTGAATGGTATAACTACCATTTCAACCGACTTTCACCAAATGGGTGTAAAAGCCGCTGAACTGATCCTGTCTTCTTCCAAAGAACATGTGGAAATACCTTTTAAACTTACGCTAAGGGCGTCGTTGTAA
PROTEIN sequence
Length: 344
MKFSHFFEHVHVDEFSATPKYLQLTHSILNAIEAGKLKKDDLVPSINELSFELEISRDTAEKGYKHLKKMGVLGSVPGKGYYIVNDDIKQTQHVMLLFNKLSAHKKIIYDGFVETLGEHVAIDFYIYNNDFALFKKLLGNAREDYSHFVIIPHFIEGGENAHEIINTIPRHKLILLDKKISGVNGEYGAVYENFENDIYNALEQALKQLAKYHTLKIIFPEKSYYPKGILKGFNRFCQEYAFTHKVVHDIAKEPINSGEVYINVMEADLVILIERLITMKYKIGKHIGVISYNETPLKKIILNGITTISTDFHQMGVKAAELILSSSKEHVEIPFKLTLRASL*