ggKbase home page

scnpilot_solids1_trim150_scaffold_10707_5

Organism: SCNPILOT_SOLID_1_TRIM150_Sphingobacteriales_42_11

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38
Location: 2163..2744

Top 3 Functional Annotations

Value Algorithm Source
conjugal transfer protein TraD n=1 Tax=Empedobacter brevis RepID=UPI0003770CE5 similarity UNIREF
DB: UNIREF100
  • Identity: 99.5
  • Coverage: 194.0
  • Bit_score: 368
  • Evalue 4.50e-99
  • rbh
Uncharacterized protein {ECO:0000313|EMBL:CDT24837.1}; TaxID=403776 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. PM2-P1-29.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.3
  • Coverage: 194.0
  • Bit_score: 347
  • Evalue 1.50e-92
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 82.5
  • Coverage: 194.0
  • Bit_score: 306
  • Evalue 6.60e-81
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingobacterium sp. PM2-P1-29 → Sphingobacterium → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 582
ATGGAAATAGTAATTGTGATATGCCTGCTGATAGTCATTGTCCTGCTTTTACAGGATAAGATTGTCATTAAGAAAAGGACAAAACAAGTACCTCCGCAGAAGAAAGTCAATCCGAACCTGCCCGATATTATGGGGCAGCCAAAATCCGTAGAACGCCTTTCAATGCCAAACGCTGCCAATGAACGCCAAATTGAGGAACCGGAGATAAACCCCGCTAATTTAGACATTGAATACGACGAAAATGAAAACGTCGGCATTCAAATCCGCAAGGAAGAGCTGGACGAAGTTTTCAGTAATATACCTGATTTGGAGGAAGAGGAAGAAGATTGGAACAGGTACGGAATATCCGGTGGCGATGACGGTTTTGCCCAAGGGGTTACCTTTGAAGAACTAAGCTCCGTGGGGGTGTTGCTCCAAAAAGAAGAATTGGAACCAGCCCAAAAGGAAACAGCGATAGCCATAGTTCAAAAAATACAGGGAACCGAATTATTCAGCCTATTGGAGAATTCTATGGAAGATGCTTCCCGAAGAATAGCCGAGCTTTTGGATAGCACCCTTTCATCTGAAACGGAAGACAGTTCT
PROTEIN sequence
Length: 194
MEIVIVICLLIVIVLLLQDKIVIKKRTKQVPPQKKVNPNLPDIMGQPKSVERLSMPNAANERQIEEPEINPANLDIEYDENENVGIQIRKEELDEVFSNIPDLEEEEEDWNRYGISGGDDGFAQGVTFEELSSVGVLLQKEELEPAQKETAIAIVQKIQGTELFSLLENSMEDASRRIAELLDSTLSSETEDSS