ggKbase home page

scnpilot_solids1_trim150_scaffold_36

Search features with annotation key words

Displaying items 1-30 of 371 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_36_1
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..234
-----------------
DNA (234bp)
protein (78aa)
Uncharacterized protein n=1 Tax=Ralstonia pickettii (strain 12D) RepID=C6BDK4_RALP1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACS61939.1}; TaxID=428406 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pickettii (strain 12D).;"
scnpilot_solids1_trim150_scaffold_36_2
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

227..1906
-----------------
DNA (1680bp)
protein (560aa)
Uncharacterized protein n=1 Tax=Ralstonia pickettii (strain 12D) RepID=C6BDK5_RALP1 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACS61940.1}; TaxID=428406 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pickettii (strain 12D).;"
scnpilot_solids1_trim150_scaffold_36_3
Pseudomonas sp. G5(2012), Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1920..2393
-----------------
DNA (474bp)
protein (158aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. G5(2012) RepID=S2FEK6_9PSED
Uncharacterized protein {ECO:0000313|EMBL:EPA95405.1}; TaxID=1268068 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. G5(2012).;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_36_4
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2397..3641
-----------------
DNA (1245bp)
protein (415aa)
Uncharacterized protein n=1 Tax=Ralstonia pickettii (strain 12D) RepID=C6BDK7_RALP1 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACS61942.1}; TaxID=428406 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pickettii (strain 12D).;"
scnpilot_solids1_trim150_scaffold_36_5
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3871..4479
-----------------
DNA (609bp)
protein (203aa)
Uncharacterized protein n=1 Tax=Ralstonia pickettii (strain 12D) RepID=C6BDK8_RALP1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACS61943.1}; TaxID=428406 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pickettii (strain 12D).;"
scnpilot_solids1_trim150_scaffold_36_6
Thauera aminoaromatica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4553..5104
-----------------
DNA (552bp)
protein (184aa)
PF11358 family protein n=1 Tax=Burkholderia multivorans ATCC BAA-247 RepID=J4JKA8_9BURK rbh
Uncharacterized protein {ECO:0000313|EMBL:ENO88982.1}; TaxID=1234381 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera aminoaromatica S2.;"
hypothetical protein rbh
scnpilot_solids1_trim150_scaffold_36_7
Pandoraea apista, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5101..5550
-----------------
DNA (450bp)
protein (150aa)
Single-stranded DNA-binding protein n=1 Tax=Burkholderia multivorans ATCC BAA-247 RepID=J5BUY7_9BURK rbh
Single-stranded DNA-binding protein {ECO:0000256|PIRNR:PIRNR002070, ECO:0000313|EMBL:AJE97688.1}; TaxID=93218 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea apista.;"
single-stranded DNA-binding protein; K03111 single-strand DNA-binding protein rbh
scnpilot_solids1_trim150_scaffold_36_8
Alcaligenes sp. EGD-AK7, Alcaligenes, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5829..7859
-----------------
DNA (2031bp)
protein (677aa)
DNA topoisomerase {ECO:0000256|RuleBase:RU000518, ECO:0000256|SAAS:SAAS00046608}; EC=5.99.1.2 {ECO:0000256|RuleBase:RU000518, ECO:0000256|SAAS:SAAS00046608};; TaxID=1386079 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Alcaligenes.;" source="Alcaligenes sp. EGD-AK7.;"
DNA topoisomerase III (EC:5.99.1.2) rbh
DNA topoisomerase n=1 Tax=Pseudomonas aeruginosa WC55 RepID=T5L084_PSEAI rbh
scnpilot_solids1_trim150_scaffold_36_9
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8370..9107)
-----------------
DNA (738bp)
protein (246aa)
Arsenical resistance protein ArsH n=1 Tax=Ralstonia pickettii (strain 12D) RepID=C6BDL2_RALP1 rbh
arsenical resistance protein ArsH; K11811 arsenical resistance protein ArsH rbh
Arsenical resistance protein ArsH {ECO:0000313|EMBL:ACS61947.1}; TaxID=428406 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pickettii (strain 12D).;"
scnpilot_solids1_trim150_scaffold_36_10
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9085..9507)
-----------------
DNA (423bp)
protein (141aa)
arsenate reductase; K00537 arsenate reductase [EC:1.20.4.1]
Arsenate reductase {ECO:0000256|RuleBase:RU362029}; EC=1.20.4.1 {ECO:0000256|RuleBase:RU362029};; TaxID=428406 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pickettii (strain 12D).;"
Arsenate reductase n=1 Tax=Ralstonia pickettii (strain 12D) RepID=C6BDL3_RALP1
scnpilot_solids1_trim150_scaffold_36_11
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9504..10736)
-----------------
DNA (1233bp)
protein (411aa)
Major facilitator superfamily MFS_1 n=1 Tax=Ralstonia pickettii (strain 12D) RepID=C6BDL4_RALP1 rbh
major facilitator superfamily protein rbh
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ACS61949.1}; TaxID=428406 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pickettii (strain 12D).;"
scnpilot_solids1_trim150_scaffold_36_12
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10739..11761)
-----------------
DNA (1023bp)
protein (341aa)
Sodium bile acid symporter family protein n=1 Tax=Pseudomonas stutzeri (strain A1501) RepID=A4VG41_PSEU5 rbh
sodium bile acid symporter family protein; K03325 arsenite transporter, ACR3 family rbh
Sodium bile acid symporter family protein {ECO:0000313|EMBL:ABP77942.1}; TaxID=379731 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (strain A1501).;"
scnpilot_solids1_trim150_scaffold_36_13
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11823..12326)
-----------------
DNA (504bp)
protein (168aa)
arsenate reductase, putative; K03741 arsenate reductase [EC:1.20.4.1] rbh
Arsenate reductase, putative n=1 Tax=Pseudomonas stutzeri (strain A1501) RepID=A4VG42_PSEU5 rbh
Arsenate reductase, putative {ECO:0000313|EMBL:ABP77943.1}; TaxID=379731 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (strain A1501).;"
scnpilot_solids1_trim150_scaffold_36_14
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12328..14100)
-----------------
DNA (1773bp)
protein (591aa)
arsenical pump-driving ATPase; K01551 arsenite-transporting ATPase [EC:3.6.3.16] rbh
Arsenical pump-driving ATPase n=1 Tax=Pseudomonas stutzeri (strain A1501) RepID=A4VG43_PSEU5 rbh
Arsenical pump-driving ATPase {ECO:0000313|EMBL:ABP77944.1}; TaxID=379731 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (strain A1501).;"
scnpilot_solids1_trim150_scaffold_36_15
Azoarcus sp. KH32C, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14116..14475)
-----------------
DNA (360bp)
protein (120aa)
Arsenical resistance operon trans-acting repressor n=1 Tax=Azoarcus sp. KH32C RepID=H0Q4L4_9RHOO
arsD; arsenical resistance operon trans-acting repressor
Arsenical resistance operon trans-acting repressor {ECO:0000313|EMBL:BAL26927.1}; TaxID=748247 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. KH32C.;"
scnpilot_solids1_trim150_scaffold_36_16
RIFOXYC12_FULL_Burkholderiales_65_23_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14534..14941)
-----------------
DNA (408bp)
protein (136aa)
hypothetical protein n=1 Tax=Methylotenera mobilis RepID=UPI000369BADD
hypothetical protein
Tax=RIFOXYC12_FULL_Burkholderiales_65_23_curated
scnpilot_solids1_trim150_scaffold_36_17
Burkholderiales bacterium GJ-E10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14941..15387)
-----------------
DNA (447bp)
protein (149aa)
protein-tyrosine phosphatase n=1 Tax=Methyloversatilis sp. NVD RepID=UPI000361B2E6
Protein-tyrosine phosphatase {ECO:0000313|EMBL:BAP88815.1}; TaxID=1469502 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium GJ-E10.;"
protein-tyrosine phosphatase
scnpilot_solids1_trim150_scaffold_36_18
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15412..15891)
-----------------
DNA (480bp)
protein (160aa)
arsC-3; arsenate reductase; K03741 arsenate reductase [EC:1.20.4.1] rbh
Arsenate reductase n=1 Tax=Pseudomonas stutzeri (strain A1501) RepID=A4VG46_PSEU5 rbh
Arsenate reductase {ECO:0000313|EMBL:ABP77947.1}; TaxID=379731 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (strain A1501).;"
scnpilot_solids1_trim150_scaffold_36_19
Bordetella hinzii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15888..16268)
-----------------
DNA (381bp)
protein (127aa)
Putative transcriptional regulator, ArsR family n=1 Tax=Ralstonia pickettii (strain 12D) RepID=C6BDM0_RALP1
putative ArsR family transcriptional regulator
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:KCB41874.1}; TaxID=1331257 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella hinzii 5132.;"
scnpilot_solids1_trim150_scaffold_36_20
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16595..16843
-----------------
DNA (249bp)
protein (83aa)
Uncharacterized protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G6F9_ALIDK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEB84268.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
scnpilot_solids1_trim150_scaffold_36_21
Thauera aminoaromatica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16812..17135
-----------------
DNA (324bp)
protein (108aa)
Uncharacterized protein n=5 Tax=Proteobacteria RepID=N4VX77_PSEAI
Uncharacterized protein {ECO:0000313|EMBL:ENO88986.1}; TaxID=1234381 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera aminoaromatica S2.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_36_22
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17312..18031
-----------------
DNA (720bp)
protein (240aa)
Uncharacterized protein n=1 Tax=Ralstonia pickettii (strain 12D) RepID=C6BDM3_RALP1 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACS61958.1}; TaxID=428406 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pickettii (strain 12D).;"
scnpilot_solids1_trim150_scaffold_36_23
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18112..18828
-----------------
DNA (717bp)
protein (239aa)
Uncharacterized protein n=1 Tax=Burkholderia multivorans ATCC BAA-247 RepID=J5BUZ8_9BURK rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACS61959.1}; TaxID=428406 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pickettii (strain 12D).;"
scnpilot_solids1_trim150_scaffold_36_24
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19120..19917
-----------------
DNA (798bp)
protein (266aa)
Uncharacterized protein n=4 Tax=Proteobacteria RepID=N4WEC0_PSEAI rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD45069.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
hypothetical protein rbh
scnpilot_solids1_trim150_scaffold_36_25
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19996..20361
-----------------
DNA (366bp)
protein (122aa)
Uncharacterized protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G6G4_ALIDK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEB84273.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
scnpilot_solids1_trim150_scaffold_36_26
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20504..21346
-----------------
DNA (843bp)
protein (281aa)
Uncharacterized protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G6G5_ALIDK rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEB84274.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
scnpilot_solids1_trim150_scaffold_36_27
Xylella fastidiosa, Xylella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21306..21827
-----------------
DNA (522bp)
protein (174aa)
hypothetical protein n=1 Tax=Cupriavidus sp. WS RepID=UPI000372252D
Uncharacterized protein {ECO:0000313|EMBL:AAF84571.1}; TaxID=160492 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xylella.;" source="Xylella fastidiosa (strain 9a5c).;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_36_28
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22152..22706
-----------------
DNA (555bp)
protein (185aa)
PF12101 family protein n=1 Tax=Burkholderia multivorans ATCC BAA-247 RepID=J4R426_9BURK rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEB84275.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
scnpilot_solids1_trim150_scaffold_36_29
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22818..23453
-----------------
DNA (636bp)
protein (212aa)
PF11679 family protein n=1 Tax=Burkholderia multivorans ATCC BAA-247 RepID=J4SCU5_9BURK rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD45073.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
scnpilot_solids1_trim150_scaffold_36_30
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23554..23949
-----------------
DNA (396bp)
protein (132aa)
Uncharacterized protein n=4 Tax=Proteobacteria RepID=N4WEB7_PSEAI
Uncharacterized protein {ECO:0000313|EMBL:EPL63926.1}; TaxID=1212549 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri B1SMN1.;"
hypothetical protein
Displaying items 1-30 of 371 in total

View Taxonomy